No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs56946324 |
chr17:38107966-38107967 |
Weak transcription Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs188177815 |
chr17:38108004-38108005 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs10589831 |
chr17:38108024-38108025 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs398058709 |
chr17:38108034-38108035 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs556746261 |
chr17:38108085-38108086 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs373787513 |
chr17:38108095-38108096 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs539231710 |
chr17:38108121-38108122 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs545848908 |
chr17:38108209-38108210 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs75481677 |
chr17:38108230-38108231 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs201869187 |
chr17:38108287-38108288 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs9889711 |
chr17:38108292-38108293 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
12 |
rs9889716 |
chr17:38108298-38108299 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
13 |
rs147418926 |
chr17:38108305-38108306 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs573493629 |
chr17:38108314-38108315 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs9895948 |
chr17:38108363-38108364 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
16 |
rs550479602 |
chr17:38108377-38108378 |
Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs115130547 |
chr17:38108431-38108432 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs533004707 |
chr17:38108436-38108437 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs574720246 |
chr17:38108470-38108471 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs7223318 |
chr17:38108553-38108554 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
21 |
rs566636276 |
chr17:38108576-38108577 |
Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs139689952 |
chr17:38108617-38108618 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs72832971 |
chr17:38108619-38108620 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
24 |
rs35194131 |
chr17:38108661-38108662 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs7209742 |
chr17:38108708-38108709 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs538566110 |
chr17:38108741-38108742 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs556594226 |
chr17:38108767-38108768 |
Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs578101288 |
chr17:38108833-38108834 |
Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs545549589 |
chr17:38108840-38108841 |
Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs545621490 |
chr17:38109005-38109006 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs557845053 |
chr17:38109006-38109007 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs372152864 |
chr17:38109069-38109070 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs142598968 |
chr17:38109073-38109074 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs28618095 |
chr17:38109075-38109076 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
35 |
rs561693156 |
chr17:38109084-38109085 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs529157566 |
chr17:38109094-38109095 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs56301252 |
chr17:38109155-38109156 |
Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs55927420 |
chr17:38109251-38109252 |
Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
39 |
rs56410675 |
chr17:38109254-38109255 |
Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs551205487 |
chr17:38109256-38109257 |
Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs55860944 |
chr17:38109302-38109303 |
Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
42 |
rs199899325 |
chr17:38109399-38109400 |
Active TSS Enhancers Weak transcription Genic enhancers
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs566622746 |
chr17:38109448-38109449 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs527809654 |
chr17:38109449-38109450 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs373214779 |
chr17:38109504-38109505 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs76137456 |
chr17:38109590-38109591 |
Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
47 |
rs567618276 |
chr17:38109625-38109626 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs537873293 |
chr17:38109661-38109662 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs550402481 |
chr17:38109716-38109717 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs73985235 |
chr17:38109730-38109731 |
Active TSS Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|