Variant report

Variant	esv3446778
Chromosome Location	chr11:85211218-85211732
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs146800097	chr11:85211223-85211224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs192132646	chr11:85211279-85211280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs555105735	chr11:85211336-85211337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs182371482	chr11:85211341-85211342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs546226809	chr11:85211343-85211344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs569568958	chr11:85211346-85211347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs34294956	chr11:85211371-85211372	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs538496484	chr11:85211384-85211385	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs556588271	chr11:85211411-85211412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs577768186	chr11:85211412-85211413	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs188064535	chr11:85211432-85211433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs553835100	chr11:85211441-85211442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs11512931	chr11:85211448-85211449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs572236699	chr11:85211464-85211465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs529001181	chr11:85211509-85211510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs542777460	chr11:85211563-85211564	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs192593719	chr11:85211571-85211572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs12285620	chr11:85211585-85211586	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs368634709	chr11:85211591-85211592	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs66707490	chr11:85211594-85211595	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs377699535	chr11:85211595-85211596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs201425550	chr11:85211597-85211598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs12793310	chr11:85211599-85211600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs12285625	chr11:85211600-85211601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs71456425	chr11:85211602-85211603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs374757840	chr11:85211604-85211605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs199677798	chr11:85211605-85211606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs147303724	chr11:85211606-85211607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs561302098	chr11:85211609-85211610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs71036481	chr11:85211620-85211621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs531620074	chr11:85211623-85211624	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs286531	chr11:85211638-85211639	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs537694843	chr11:85211666-85211667	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs565229095	chr11:85211669-85211670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs532340094	chr11:85211688-85211689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs286532	chr11:85211700-85211701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs375902719	chr11:85211704-85211705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs12575291	chr11:85211719-85211720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	20844748	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Colorectal cancer	16912164	CNVD
Mental retardation	17847001	CNVD
Melanoma	19509136	CNVD
Sudden cardiac death	19188705	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Bipolar disorder	19114987	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ductal carcinoma	22052326	CNVD
Obesity	20622171	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:85195200-85238200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr11:85197800-85216000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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