Variant report

Variant	esv3448147
Chromosome Location	chr4:92011533-92275731
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:92034335-92034619	HepG2	liver:	n/a	n/a
2	ATF2	chr4:92177249-92177619	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr4:92177198-92177597	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr4:92177316-92177515	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr4:92191483-92191539	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr4:92246684-92246980	GM12878	blood:	n/a	n/a
7	BATF	chr4:92246616-92246958	GM12878	blood:	n/a	n/a
8	BCL11A	chr4:92177273-92177559	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL11A	chr4:92177222-92177529	H1-hESC	embryonic stem cell:	n/a	n/a
10	BHLHE40	chr4:92128792-92128991	GM12878	blood:	n/a	n/a
11	BHLHE40	chr4:92264987-92264999	GM12878	blood:	n/a	n/a
12	BHLHE40	chr4:92223302-92223415	GM12878	blood:	n/a	n/a
13	CBX3	chr4:92024996-92025295	K562	blood:	n/a	n/a
14	CEBPB	chr4:92181253-92181489	HepG2	liver:	n/a	chr4:92181364-92181375
15	CEBPB	chr4:92148015-92148366	HepG2	liver:	n/a	chr4:92148264-92148277
16	CEBPB	chr4:92034320-92034601	ECC-1	luminal epithelium:	n/a	n/a
17	CEBPB	chr4:92147997-92148383	A549	lung:	n/a	chr4:92148264-92148277
18	CEBPB	chr4:92063721-92064028	IMR90	lung:	n/a	chr4:92063859-92063870
19	CEBPB	chr4:92061869-92062156	K562	blood:	n/a	chr4:92062016-92062027
20	CEBPB	chr4:92260282-92260576	HepG2	liver:	n/a	chr4:92260436-92260447
21	CEBPB	chr4:92044637-92044818	H1-hESC	embryonic stem cell:	n/a	chr4:92044758-92044769 chr4:92044718-92044729
22	CEBPB	chr4:92148021-92148389	Hela-S3	cervix:	n/a	chr4:92148264-92148277
23	CEBPB	chr4:92063832-92063977	H1-hESC	embryonic stem cell:	n/a	chr4:92063859-92063870
24	CEBPB	chr4:92148597-92148798	A549	lung:	n/a	chr4:92148629-92148642
25	CEBPB	chr4:92272267-92272556	HepG2	liver:	n/a	chr4:92272388-92272399 chr4:92272386-92272399 chr4:92272386-92272397 chr4:92272388-92272397
26	CEBPB	chr4:92061856-92062186	A549	lung:	n/a	chr4:92062016-92062027
27	CEBPB	chr4:92148019-92148382	IMR90	lung:	n/a	chr4:92148264-92148277
28	CEBPB	chr4:92148030-92148354	H1-hESC	embryonic stem cell:	n/a	chr4:92148264-92148277
29	CEBPB	chr4:92063745-92063988	A549	lung:	n/a	chr4:92063859-92063870
30	CEBPB	chr4:92177264-92177553	H1-hESC	embryonic stem cell:	n/a	n/a
31	CEBPB	chr4:92061857-92062184	IMR90	lung:	n/a	chr4:92062016-92062027
32	CEBPB	chr4:92148031-92148396	K562	blood:	n/a	chr4:92148264-92148277
33	CEBPB	chr4:92061834-92062206	HepG2	liver:	n/a	chr4:92062016-92062027
34	CEBPB	chr4:92258443-92258660	HepG2	liver:	n/a	n/a
35	CEBPB	chr4:92272250-92272485	K562	blood:	n/a	chr4:92272388-92272399 chr4:92272386-92272399 chr4:92272386-92272397 chr4:92272388-92272397
36	CEBPB	chr4:92044571-92044854	HepG2	liver:	n/a	chr4:92044758-92044769 chr4:92044718-92044729
37	CEBPB	chr4:92148719-92148746	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr4:92044617-92044895	A549	lung:	n/a	chr4:92044758-92044769 chr4:92044718-92044729
39	CEBPB	chr4:92063703-92064031	HepG2	liver:	n/a	chr4:92063859-92063870
40	CEBPB	chr4:92272244-92272571	IMR90	lung:	n/a	chr4:92272388-92272399 chr4:92272386-92272399 chr4:92272386-92272397 chr4:92272388-92272397
41	CEBPZ	chr4:92031768-92031775	HepG2	liver:	n/a	n/a
42	CHD1	chr4:92143874-92143897	H1-hESC	embryonic stem cell:	n/a	n/a
43	CHD2	chr4:92223402-92223554	GM12878	blood:	n/a	n/a
44	CHD2	chr4:92177261-92177681	H1-hESC	embryonic stem cell:	n/a	n/a
45	CHD2	chr4:92258506-92258507	GM12878	blood:	n/a	n/a
46	CTCF	chr4:92013987-92014109	NHEK	skin:	n/a	n/a
47	CTCF	chr4:92038140-92038290	Hela-S3	cervix:	n/a	chr4:92038207-92038228
48	CTCF	chr4:92038120-92038270	SAEC	small airway:	n/a	chr4:92038207-92038228
49	CTCF	chr4:92038100-92038250	HEEpiC	esophagus:	n/a	chr4:92038207-92038228
50	CTCF	chr4:92038160-92038310	HUVEC	blood vessel:	n/a	chr4:92038207-92038228

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:92189705-92189755	HCF	heart:	n/a
2	chr4:92048256-92048306	NHDF-neo	bronchial:	n/a
3	chr4:92034737-92034787	HAEpiC	amniotic membrane:	n/a
4	chr4:92089238-92089288	SK-N-SH_RA	brain:	n/a
5	chr4:92189705-92189755	GM12878	blood:	n/a
6	chr4:92048256-92048306	AoSMC	blood vessel:	n/a
7	chr4:92089238-92089288	HEK293	kidney:	embryo
8	chr4:92089238-92089288	NH-A	brain:	n/a
9	chr4:92089238-92089288	HepG2	liver:	n/a
10	chr4:92089238-92089288	ECC-1	luminal epithelium:	n/a
11	chr4:92048256-92048306	RPTEC	kidney:	n/a
12	chr4:92034737-92034787	ECC-1	luminal epithelium:	n/a
13	chr4:92034737-92034787	MCF10A-Er-Src	breast:	n/a
14	chr4:92034737-92034787	GM12891	blood:	n/a
15	chr4:92089238-92089288	ovcar-3	ovarian:	n/a
16	chr4:92034737-92034787	HIPEpiC	eye:	n/a
17	chr4:92089238-92089288	K562	blood:	n/a
18	chr4:92089238-92089288	CMK	blood:	n/a
19	chr4:92048256-92048306	K562	blood:	n/a
20	chr4:92034737-92034787	Jurkat	blood:	n/a
21	chr4:92048256-92048306	GM19239	blood:	n/a
22	chr4:92189705-92189755	ECC-1	luminal epithelium:	n/a
23	chr4:92189705-92189755	IMR90	lung:	fetal
24	chr4:92089238-92089288	HPAEpiC	pulmonary alveolar:	n/a
25	chr4:92189705-92189755	HUVEC	blood vessel:	n/a
26	chr4:92189705-92189755	PANC-1	pancreas:	n/a
27	chr4:92034737-92034787	SAEC	small airway:	n/a
28	chr4:92034737-92034787	NHDF-neo	bronchial:	n/a
29	chr4:92048256-92048306	PANC-1	pancreas:	n/a
30	chr4:92034737-92034787	HCM	heart:	n/a
31	chr4:92189705-92189755	AG09309	skin:	n/a
32	chr4:92089238-92089288	HEEpiC	esophagus:	n/a
33	chr4:92089238-92089288	PrEC	prostate:	n/a
34	chr4:92034737-92034787	NH-A	brain:	n/a
35	chr4:92048256-92048306	AG04449	skin:	fetal
36	chr4:92048256-92048306	T-47D	breast:	n/a
37	chr4:92089238-92089288	GM12878	blood:	n/a
38	chr4:92034737-92034787	AoSMC	blood vessel:	n/a
39	chr4:92034737-92034787	MCF-7	breast:	n/a
40	chr4:92189705-92189755	HEEpiC	esophagus:	n/a
41	chr4:92189705-92189755	LNCaP	prostate:	n/a
42	chr4:92034737-92034787	GM06990	blood:	n/a
43	chr4:92048256-92048306	ovcar-3	ovarian:	n/a
44	chr4:92034737-92034787	NHBE	bronchial:	n/a
45	chr4:92048256-92048306	HRPEpiC	eye:	n/a
46	chr4:92089238-92089288	HRE	kidney:	n/a
47	chr4:92089238-92089288	IMR90	lung:	fetal
48	chr4:92034737-92034787	HL-60	blood:	n/a
49	chr4:92034737-92034787	ovcar-3	ovarian:	n/a
50	chr4:92034737-92034787	K562	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:82295674..82298297-chr4:92009865..92012633,2	MCF-7	breast:
2	chr4:92256031..92258951-chr4:92265643..92267671,2	MCF-7	breast:
3	chr4:92228930..92230474-chr4:92239556..92242007,2	K562	blood:
4	chr4:92249209..92252138-chr4:92252795..92255607,2	MCF-7	breast:
5	chr4:92228930..92230474-chr4:92239556..92242007,2	K562	blood:
6	chr4:92176022..92178505-chr4:92180113..92182729,2	K562	blood:
7	chr4:92256031..92258951-chr4:92265643..92267671,2	MCF-7	breast:
8	chr4:92034306..92035417-chr4:92423226..92424074,5	MCF-7	breast:
9	chr4:92118886..92121028-chr6:31337898..31340855,2	MCF-7	breast:
10	chr4:92176022..92178505-chr4:92180113..92182729,2	K562	blood:
11	chr4:92249209..92252138-chr4:92252795..92255607,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP11-763F8.1.1-1	chr4:92033750-92033941	ENSG00000248984.1
2	lnc-RP11-763F8.1.1-1	chr4:92029174-92029251	ENSG00000248984.1

Variant related genes	Relation type
ENSG00000248984	TF binding region
ENSG00000249049	TF binding region
ENSG00000248984	CpG island
ENSG00000249049	CpG island
ENSG00000201658	chromatin interactions
ENSG00000178217	chromatin interactions
ENSG00000226659	chromatin interactions

Extended variants
information (count: 3896 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:3896 , 50 per page) page: 1 2 3 4 5 6 7 ... 78

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs182472629	chr4:92011536-92011537	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs373888058	chr4:92011554-92011555	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs564906431	chr4:92011579-92011580	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs186702634	chr4:92011597-92011598	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs370494784	chr4:92011635-92011636	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs563005649	chr4:92011655-92011656	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs541160492	chr4:92011659-92011660	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs561009547	chr4:92011751-92011752	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs530139353	chr4:92011758-92011759	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs373679492	chr4:92011789-92011790	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs533222982	chr4:92011795-92011796	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs1988226	chr4:92011806-92011807	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs563358615	chr4:92011841-92011842	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs191234896	chr4:92011850-92011851	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs35354572	chr4:92011873-92011874	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs533909111	chr4:92011892-92011893	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs182564699	chr4:92011901-92011902	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs150369484	chr4:92011943-92011944	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs553549585	chr4:92011960-92011961	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs187551422	chr4:92011976-92011977	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs192131231	chr4:92011977-92011978	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs536368389	chr4:92012007-92012008	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs71597225	chr4:92012029-92012030	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs576014882	chr4:92012031-92012032	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs549244913	chr4:92012045-92012046	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs11936946	chr4:92012047-92012048	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs558851283	chr4:92012052-92012053	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs79405171	chr4:92012068-92012069	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs540783180	chr4:92012084-92012085	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs560772738	chr4:92012094-92012095	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs574560187	chr4:92012102-92012103	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs183567943	chr4:92012138-92012139	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs563511560	chr4:92012149-92012150	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs532586081	chr4:92012207-92012208	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs34029564	chr4:92012265-92012266	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs552297911	chr4:92012280-92012281	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs187817542	chr4:92012283-92012284	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs528802717	chr4:92012312-92012313	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs548764083	chr4:92012324-92012325	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs550267629	chr4:92012325-92012326	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs192785877	chr4:92012336-92012337	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs568703413	chr4:92012341-92012342	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs576397168	chr4:92012344-92012345	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs34681089	chr4:92012352-92012353	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs536329635	chr4:92012373-92012374	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs549945483	chr4:92012392-92012393	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs184415663	chr4:92012403-92012404	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs568939698	chr4:92012477-92012478	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs2189187	chr4:92012480-92012481	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs189345256	chr4:92012486-92012487	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelodysplastic syndrome	21251322	CNVD
Multiple myeloma	17550852	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
primary effusion lymphomas	17116491	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Olfactory neuroblastoma	18408657	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Colorectal cancer	20459617	CNVD
Acute monocytic leukemia	16498392	CNVD
Multiple myeloma	16616336	CNVD
Esophageal adenocarcinoma	18820669	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Parkinson disease	20877625	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Obesity	20622171	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cancer	20164920	CNVD
Cancer	20164919	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal cancer	21851588	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Recurrent pregnancy loss	19789632	CNVD

Chromatin state (count:252 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:92009400-92017200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr4:92010800-92014400	Weak transcription	Esophagus	oesophagus
3	chr4:92011200-92011600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr4:92011600-92012600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr4:92012600-92014600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr4:92013200-92013800	Weak transcription	NHEK	skin
7	chr4:92013400-92013600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr4:92013600-92015000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr4:92013800-92014000	Enhancers	NHEK	skin
10	chr4:92014000-92015200	Weak transcription	NHEK	skin
11	chr4:92014400-92015400	Enhancers	Esophagus	oesophagus
12	chr4:92015000-92015800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr4:92015200-92016000	Enhancers	NHEK	skin
14	chr4:92015400-92015800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr4:92015600-92016600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
16	chr4:92016600-92017600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr4:92017600-92018000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr4:92018000-92018200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
19	chr4:92018200-92022200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr4:92020200-92020600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr4:92020200-92021000	Enhancers	iPS-20b Cell Line	embryonic stem cell
22	chr4:92020200-92021800	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr4:92020400-92020800	Enhancers	HUES48 Cell Line	embryonic stem cell
24	chr4:92020400-92021400	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr4:92020600-92021800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr4:92021800-92022400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr4:92022200-92022400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr4:92022400-92025200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr4:92024000-92024200	Enhancers	iPS-20b Cell Line	embryonic stem cell
30	chr4:92029400-92030200	Enhancers	Fetal Heart	heart
31	chr4:92030000-92030400	Enhancers	Left Ventricle	heart
32	chr4:92032400-92033400	Enhancers	Fetal Kidney	kidney
33	chr4:92033400-92034200	Weak transcription	Fetal Kidney	kidney
34	chr4:92034200-92034400	Enhancers	iPS-15b Cell Line	embryonic stem cell
35	chr4:92034200-92034400	Enhancers	Fetal Kidney	kidney
36	chr4:92034400-92035400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
37	chr4:92035400-92035800	Enhancers	ES-I3 Cell Line	embryonic stem cell
38	chr4:92035400-92036000	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr4:92035400-92036000	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr4:92035400-92036000	Enhancers	iPS-15b Cell Line	embryonic stem cell
41	chr4:92035400-92036000	Enhancers	iPS-18 Cell Line	embryonic stem cell
42	chr4:92035600-92036000	Enhancers	H1 Cell Line	embryonic stem cell
43	chr4:92038200-92038600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr4:92038600-92039600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr4:92039600-92039800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr4:92048000-92049400	Enhancers	Fetal Kidney	kidney
47	chr4:92048000-92050200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr4:92048200-92051000	Enhancers	Fetal Heart	heart
49	chr4:92048600-92049200	Enhancers	iPS-15b Cell Line	embryonic stem cell
50	chr4:92048600-92049200	Enhancers	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links