Variant report

Variant	esv3448925
Chromosome Location	chr3:138277303-138312046
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:162)
CpG islands
(count:183)
Chromatin interactive
region (count:14)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:162 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr3:138290836-138291217	GM12878	blood:	n/a	n/a
2	BATF	chr3:138290753-138291213	GM12878	blood:	n/a	n/a
3	BCL3	chr3:138307165-138307494	GM12878	blood:	n/a	n/a
4	CEBPB	chr3:138288558-138288802	IMR90	lung:	n/a	chr3:138288660-138288671
5	CEBPB	chr3:138288564-138288798	MCF-7	breast:	n/a	chr3:138288660-138288671
6	CEBPB	chr3:138288565-138288831	HepG2	liver:	n/a	chr3:138288660-138288671
7	CEBPB	chr3:138288628-138288758	K562	blood:	n/a	chr3:138288660-138288671
8	CEBPB	chr3:138281801-138282056	HepG2	liver:	n/a	chr3:138281950-138281961
9	CEBPB	chr3:138288613-138288832	Hela-S3	cervix:	n/a	chr3:138288660-138288671
10	CHD1	chr3:138297122-138297309	GM12878	blood:	n/a	n/a
11	CHD2	chr3:138297131-138297320	GM12878	blood:	n/a	n/a
12	CTCF	chr3:138285880-138286030	Caco-2	colon:	n/a	n/a
13	CTCF	chr3:138286400-138286550	A549	lung:	n/a	n/a
14	CTCF	chr3:138286240-138286390	NHEK	skin:	n/a	n/a
15	CTCF	chr3:138286400-138286550	HRPEpiC	eye:	n/a	n/a
16	CTCF	chr3:138286320-138286470	HPAF	blood vessel:	n/a	n/a
17	CTCF	chr3:138286360-138286510	Caco-2	colon:	n/a	n/a
18	CTCF	chr3:138286260-138286410	HCPEpiC	choroid plexus:	n/a	n/a
19	CTCF	chr3:138286392-138286407	Spleen_OC	spleen:	n/a	n/a
20	CTCF	chr3:138286380-138286530	HEEpiC	esophagus:	n/a	n/a
21	CTCF	chr3:138286360-138286510	HMEC	breast:	n/a	n/a
22	CTCF	chr3:138286180-138286330	RPTEC	kidney:	n/a	n/a
23	CTCF	chr3:138286300-138286450	HepG2	liver:	n/a	n/a
24	CTCF	chr3:138286355-138286458	Lung_OC	lung:	n/a	n/a
25	CTCF	chr3:138286340-138286490	MCF-7	breast:	n/a	n/a
26	CTCF	chr3:138282139-138282226	Kidney_OC	kidney:	n/a	n/a
27	CTCF	chr3:138286360-138286510	HFF	foreskin:	n/a	n/a
28	CTCF	chr3:138286300-138286450	HCFaa	heart:	n/a	n/a
29	CTCF	chr3:138286280-138286430	GM06990	blood:	n/a	n/a
30	CTCF	chr3:138286260-138286410	BE2_C	brain:	n/a	n/a
31	CTCF	chr3:138286360-138286510	GM12871	blood:	n/a	n/a
32	CTCF	chr3:138286262-138286581	GM12878	blood:	n/a	n/a
33	CTCF	chr3:138286280-138286430	HBMEC	blood vessel:	n/a	n/a
34	CTCF	chr3:138286165-138286536	MCF-7	breast:	n/a	n/a
35	CTCF	chr3:138286340-138286490	BE2_C	brain:	n/a	n/a
36	CTCF	chr3:138286385-138286434	K562	blood:	n/a	n/a
37	CTCF	chr3:138286320-138286470	HBMEC	blood vessel:	n/a	n/a
38	CTCF	chr3:138286260-138286410	GM12872	blood:	n/a	n/a
39	CTCF	chr3:138308401-138308490	GM10248	blood:	n/a	n/a
40	CTCF	chr3:138286169-138286610	MCF-7	breast:	n/a	n/a
41	CTCF	chr3:138286280-138286430	GM12867	blood:	n/a	n/a
42	CTCF	chr3:138286340-138286490	AoAF	blood vessel:	n/a	n/a
43	CTCF	chr3:138286261-138286523	K562	blood:	n/a	n/a
44	CTCF	chr3:138286325-138286493	LNCaP	prostate:	n/a	n/a
45	CTCF	chr3:138286329-138286466	HepG2	liver:	n/a	n/a
46	CTCF	chr3:138286320-138286470	GM12874	blood:	n/a	n/a
47	CTCF	chr3:138286340-138286490	HPAF	blood vessel:	n/a	n/a
48	CTCF	chr3:138286323-138286495	LNCaP	prostate:	n/a	n/a
49	CTCF	chr3:138286307-138286531	MCF-7	breast:	n/a	n/a
50	CTCF	chr3:138286344-138286503	MCF-7	breast:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:138311416-138311466	GM19239	blood:	n/a
2	chr3:138311416-138311466	NHDF-neo	bronchial:	n/a
3	chr3:138311508-138311558	ProgFib	skin:	n/a
4	chr3:138311416-138311466	HCPEpiC	choroid plexus:	n/a
5	chr3:138311416-138311466	SK-N-MC	brain:	n/a
6	chr3:138309376-138309426	AoSMC	blood vessel:	n/a
7	chr3:138311508-138311558	SAEC	small airway:	n/a
8	chr3:138309376-138309426	T-47D	breast:	n/a
9	chr3:138311416-138311466	HEK293	kidney:	embryo
10	chr3:138311508-138311558	NT2-D1	testis:	n/a
11	chr3:138309376-138309426	AG10803	skin:	n/a
12	chr3:138311508-138311558	NHDF-neo	bronchial:	n/a
13	chr3:138311416-138311466	HPAEpiC	pulmonary alveolar:	n/a
14	chr3:138311416-138311466	HCM	heart:	n/a
15	chr3:138309376-138309426	BE2_C	brain:	n/a
16	chr3:138309376-138309426	NHDF-neo	bronchial:	n/a
17	chr3:138311508-138311558	CMK	blood:	n/a
18	chr3:138311508-138311558	A549	lung:	n/a
19	chr3:138311508-138311558	Hela-S3	cervix:	n/a
20	chr3:138309376-138309426	ECC-1	luminal epithelium:	n/a
21	chr3:138309376-138309426	SK-N-SH_RA	brain:	n/a
22	chr3:138311416-138311466	SK-N-SH_RA	brain:	n/a
23	chr3:138311416-138311466	AG09319	gingival:	n/a
24	chr3:138311508-138311558	NH-A	brain:	n/a
25	chr3:138309376-138309426	HCT-116	colon:	n/a
26	chr3:138311508-138311558	HRCEpiC	kidney:	n/a
27	chr3:138311508-138311558	U87	brain:	n/a
28	chr3:138311508-138311558	MCF-7	breast:	n/a
29	chr3:138309376-138309426	HL-60	blood:	n/a
30	chr3:138311416-138311466	IMR90	lung:	fetal
31	chr3:138311508-138311558	RPTEC	kidney:	n/a
32	chr3:138311416-138311466	HCF	heart:	n/a
33	chr3:138311416-138311466	HUVEC	blood vessel:	n/a
34	chr3:138311508-138311558	GM12891	blood:	n/a
35	chr3:138311508-138311558	HNPCEpiC	eye:	n/a
36	chr3:138311416-138311466	AG04450	lung:	fetal
37	chr3:138311416-138311466	Jurkat	blood:	n/a
38	chr3:138311508-138311558	Jurkat	blood:	n/a
39	chr3:138309376-138309426	HIPEpiC	eye:	n/a
40	chr3:138309376-138309426	CMK	blood:	n/a
41	chr3:138309376-138309426	U87	brain:	n/a
42	chr3:138311508-138311558	SK-N-SH	brain:	n/a
43	chr3:138311416-138311466	GM12892	blood:	n/a
44	chr3:138309376-138309426	HUVEC	blood vessel:	n/a
45	chr3:138311416-138311466	U87	brain:	n/a
46	chr3:138309376-138309426	HepG2	liver:	n/a
47	chr3:138311416-138311466	PrEC	prostate:	n/a
48	chr3:138311416-138311466	HAEpiC	amniotic membrane:	n/a
49	chr3:138311416-138311466	NB4	blood:	n/a
50	chr3:138311508-138311558	PANC-1	pancreas:	n/a

(count:14 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:138309173..138314814-chr3:138323140..138328328,8	K562	blood:
2	chr2:197162739..197163660-chr3:138306734..138307658,2	MCF-7	breast:
3	chr3:138308891..138310571-chr3:138313902..138316460,2	K562	blood:
4	chr3:138285865..138286691-chr3:138634339..138635162,2	MCF-7	breast:
5	chr3:138308688..138311077-chr3:138311353..138314105,2	MCF-7	breast:
6	chr3:138305622..138307712-chr3:138326146..138327736,2	K562	blood:
7	chr3:138291466..138294081-chr3:138311931..138314482,2	MCF-7	breast:
8	chr3:138308688..138311077-chr3:138311353..138314105,2	MCF-7	breast:
9	chr3:138307055..138308900-chr3:138311564..138313452,3	K562	blood:
10	chr3:138309156..138310798-chr3:138631884..138634871,2	MCF-7	breast:
11	chr3:138306109..138310037-chr3:138310110..138314269,4	MCF-7	breast:
12	chr3:138306522..138308483-chr3:138311202..138313507,2	MCF-7	breast:
13	chr3:138311550..138315468-chr3:138324471..138329332,12	MCF-7	breast:
14	chr3:138310855..138313031-chr3:138326538..138329064,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PIK3CB-1	chr3:138310708-138310798	NONHSAT092334
2	lnc-PIK3CB-1	chr3:138311823-138311922	NONHSAT092334

No data

Variant related genes	Relation type
CEP70	TF binding region
CEP70	CpG island
ENSG00000158234	chromatin interactions
ENSG00000114107	chromatin interactions

Extended variants
information (count: 1319 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:1319 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs560980950	chr3:138277352-138277353	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs530028947	chr3:138277431-138277432	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs543434603	chr3:138277450-138277451	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs376965254	chr3:138277451-138277452	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs541779693	chr3:138277452-138277453	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs532227832	chr3:138277516-138277517	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs551950273	chr3:138277676-138277677	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs144138635	chr3:138277690-138277691	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs527834797	chr3:138277752-138277753	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs561848164	chr3:138277882-138277883	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs34683185	chr3:138277883-138277884	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs547978570	chr3:138277911-138277912	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs567853229	chr3:138277928-138277929	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs184504218	chr3:138277930-138277931	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs371053912	chr3:138277984-138277985	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs189347407	chr3:138277993-138277994	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs28673120	chr3:138278001-138278002	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs538664855	chr3:138278044-138278045	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs558755733	chr3:138278057-138278058	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs34496485	chr3:138278082-138278083	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs572508047	chr3:138278084-138278085	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs534481300	chr3:138278112-138278113	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs139939964	chr3:138278119-138278120	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs143357236	chr3:138278132-138278133	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs530956211	chr3:138278173-138278174	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs544018812	chr3:138278176-138278177	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs1379257	chr3:138278206-138278207	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs533104681	chr3:138278210-138278211	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs543772764	chr3:138278219-138278220	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs563589420	chr3:138278220-138278221	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs146702687	chr3:138278255-138278256	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs545783929	chr3:138278258-138278259	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs139167176	chr3:138278268-138278269	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs528229876	chr3:138278314-138278315	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs80297359	chr3:138278329-138278330	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs561173793	chr3:138278400-138278401	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs559935915	chr3:138278406-138278407	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs530314380	chr3:138278412-138278413	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs550028949	chr3:138278468-138278469	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs111946647	chr3:138278474-138278475	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs142517417	chr3:138278498-138278499	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs552553476	chr3:138278511-138278512	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs566034596	chr3:138278543-138278544	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs535169100	chr3:138278614-138278615	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs554447405	chr3:138278634-138278635	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs528908413	chr3:138278666-138278667	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs574648647	chr3:138278733-138278734	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs537262944	chr3:138278754-138278755	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs150919862	chr3:138278785-138278786	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs547649784	chr3:138278839-138278840	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
microdeletion syndrome	22180640	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	18645599	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Hepatocellular carcinoma	16750200	CNVD
Intracranial aneurysm	16715129	CNVD
Lung cancer	16740712	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Blepharophimosis-ptosis-epicanthus inversus syndrome	22067867	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	21147756	CNVD
lymphocytic leukemia	21291569	CNVD
Myelofibrosis	22110671	CNVD
abnormal development	18461090	CNVD

Chromatin state (count:723 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:138255800-138282000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr3:138262000-138281800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr3:138267600-138292000	Weak transcription	Fetal Heart	heart
4	chr3:138268200-138278400	Weak transcription	Brain Anterior Caudate	brain
5	chr3:138268400-138278200	Weak transcription	Aorta	Aorta
6	chr3:138268600-138278200	Weak transcription	Esophagus	oesophagus
7	chr3:138268600-138278200	Weak transcription	Pancreas	Pancrea
8	chr3:138268600-138279000	Weak transcription	Colonic Mucosa	Colon
9	chr3:138268600-138291200	Weak transcription	Rectal Smooth Muscle	rectum
10	chr3:138268600-138297800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr3:138268800-138278200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr3:138268800-138278200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr3:138268800-138278200	Weak transcription	Rectal Mucosa Donor 29	rectum
14	chr3:138268800-138278400	Weak transcription	Left Ventricle	heart
15	chr3:138268800-138278800	Weak transcription	Right Ventricle	heart
16	chr3:138268800-138278800	Weak transcription	Stomach Smooth Muscle	stomach
17	chr3:138268800-138279000	Weak transcription	Gastric	stomach
18	chr3:138268800-138279200	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr3:138268800-138282800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr3:138268800-138287400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr3:138268800-138293000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr3:138269000-138278800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr3:138269000-138278800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr3:138269000-138279200	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr3:138269000-138306800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr3:138269400-138278200	Weak transcription	Liver	Liver
27	chr3:138269600-138279400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr3:138270200-138278400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr3:138271400-138278800	Weak transcription	Primary T helper cells fromperipheralblood	blood
30	chr3:138271600-138277800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr3:138271800-138278600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
32	chr3:138272800-138279400	Weak transcription	Primary T cells from cord blood	blood
33	chr3:138273400-138278000	Weak transcription	Primary T helper cells PMA-I stimulated	--
34	chr3:138274000-138278000	Weak transcription	Skeletal Muscle Male	skeletal muscle
35	chr3:138274000-138278200	Weak transcription	Ovary	ovary
36	chr3:138274600-138281800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr3:138275200-138278200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr3:138275200-138278200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
39	chr3:138275200-138278200	Weak transcription	Thymus	Thymus
40	chr3:138275200-138291800	Weak transcription	Fetal Kidney	kidney
41	chr3:138275600-138278200	Weak transcription	Fetal Thymus	thymus
42	chr3:138275800-138278400	Weak transcription	Lung	lung
43	chr3:138276600-138280400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr3:138277000-138277600	ZNF genes & repeats	Brain Germinal Matrix	brain
45	chr3:138277000-138277800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
46	chr3:138277000-138279000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
47	chr3:138277000-138279200	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
48	chr3:138277000-138280400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
49	chr3:138277200-138278200	Weak transcription	Fetal Stomach	stomach
50	chr3:138277200-138279000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links