No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs142624040 |
chr2:11483804-11483805 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs527425447 |
chr2:11483849-11483850 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs77774091 |
chr2:11483856-11483857 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs549841536 |
chr2:11483912-11483913 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs531182260 |
chr2:11483994-11483995 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs373067826 |
chr2:11484029-11484030 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs568312681 |
chr2:11484044-11484045 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs529196769 |
chr2:11484064-11484065 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs190537772 |
chr2:11484065-11484066 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs200302902 |
chr2:11484096-11484097 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs199867337 |
chr2:11484142-11484143 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs371793652 |
chr2:11484143-11484144 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs201281924 |
chr2:11484160-11484161 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs199520770 |
chr2:11484202-11484203 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs547017422 |
chr2:11484203-11484204 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs368832806 |
chr2:11484212-11484213 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs371946291 |
chr2:11484213-11484214 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs199617335 |
chr2:11484218-11484219 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
Chromatin interactive region
|
12 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs201526009 |
chr2:11484273-11484274 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs556029751 |
chr2:11484374-11484375 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs574042934 |
chr2:11484422-11484423 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs541317017 |
chr2:11484452-11484453 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs553188502 |
chr2:11484457-11484458 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs149189005 |
chr2:11484458-11484459 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs577796797 |
chr2:11484461-11484462 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs539977220 |
chr2:11484462-11484463 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs372125911 |
chr2:11484463-11484464 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs76229353 |
chr2:11484476-11484477 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs111685837 |
chr2:11484477-11484478 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs367981478 |
chr2:11484639-11484640 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
13 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs545908289 |
chr2:11484699-11484700 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs563992651 |
chr2:11484702-11484703 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs180710254 |
chr2:11484844-11484845 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs543096124 |
chr2:11484864-11484865 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs561656685 |
chr2:11484875-11484876 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs547693140 |
chr2:11484890-11484891 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs565902541 |
chr2:11484893-11484894 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
15 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs532948796 |
chr2:11484924-11484925 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs551861092 |
chr2:11484941-11484942 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs570007205 |
chr2:11484951-11484952 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs537551262 |
chr2:11484954-11484955 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs150976481 |
chr2:11484979-11484980 |
Active TSS Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs567306139 |
chr2:11485036-11485037 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs147785212 |
chr2:11485065-11485066 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs370537237 |
chr2:11485097-11485098 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs13031658 |
chr2:11485104-11485105 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs553225561 |
chr2:11485114-11485115 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs111245341 |
chr2:11485122-11485123 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
14 gene(s)
|
Overlapped CNVs
|
mRNA abundance
|
49 |
rs538807716 |
chr2:11485130-11485131 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs557525967 |
chr2:11485138-11485139 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive regionlncRNA
|
16 gene(s)
|
Overlapped CNVs
|
n/a
|