Variant report

Variant	esv3449698
Chromosome Location	chr19:24600060-24603066
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 519 )
Associated
traits (count: 39 )

Variant overlapped rSNPs/rCNVs (count:519 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs367772255	chr19:24600067-24600068	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs200987957	chr19:24600072-24600073	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs199751272	chr19:24600081-24600082	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs78101513	chr19:24600088-24600089	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs62134499	chr19:24600092-24600093	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs76566412	chr19:24600097-24600098	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs74535423	chr19:24600098-24600099	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs77242851	chr19:24600099-24600100	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs62134500	chr19:24600101-24600102	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs79427003	chr19:24600102-24600103	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs74801025	chr19:24600104-24600105	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs77436174	chr19:24600108-24600109	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs75427883	chr19:24600109-24600110	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs79980937	chr19:24600110-24600111	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs77533949	chr19:24600117-24600118	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs113760404	chr19:24600118-24600119	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs78032868	chr19:24600132-24600133	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs200438918	chr19:24600135-24600136	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs77760695	chr19:24600137-24600138	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs79290846	chr19:24600138-24600139	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs77837276	chr19:24600143-24600144	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs76869082	chr19:24600146-24600147	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs77338134	chr19:24600148-24600149	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs78896341	chr19:24600152-24600153	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs76725093	chr19:24600156-24600157	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs565026602	chr19:24600175-24600176	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs532427080	chr19:24600181-24600182	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs145339432	chr19:24600183-24600184	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs544693153	chr19:24600195-24600196	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs562915499	chr19:24600196-24600197	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs146203938	chr19:24600201-24600202	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs369830745	chr19:24600208-24600209	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs200702616	chr19:24600216-24600217	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs138031663	chr19:24600220-24600221	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs201849302	chr19:24600225-24600226	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs146178784	chr19:24600228-24600229	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs191589242	chr19:24600238-24600239	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs548587495	chr19:24600256-24600257	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs145745773	chr19:24600263-24600264	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs146997138	chr19:24600267-24600268	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs141628540	chr19:24600269-24600270	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs148775931	chr19:24600282-24600283	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs147668133	chr19:24600285-24600286	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs143154057	chr19:24600289-24600290	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs145309455	chr19:24600291-24600292	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs183772063	chr19:24600294-24600295	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs140019982	chr19:24600296-24600297	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs564884075	chr19:24600298-24600299	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs140734914	chr19:24600300-24600301	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs527491116	chr19:24600302-24600303	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:39)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Autism	19287141	CNVD
Lung cancer	18438408	CNVD

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:24594200-24603400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
2	chr19:24595800-24602400	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
3	chr19:24597600-24603400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
4	chr19:24598200-24602800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr19:24601200-24601400	ZNF genes & repeats	HUVEC	blood vessel
6	chr19:24601200-24601600	ZNF genes & repeats	NH-A	brain
7	chr19:24601600-24608400	Weak transcription	NH-A	brain
8	chr19:24602000-24603400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell

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