Variant report
Variant | esv3450283 |
---|---|
Chromosome Location | chr8:39180844-39238225 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:346)
- CpG islands (count:122)
- Chromatin interactive region (count:4)
- LncRNA region (count:32)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:39184983-39185219 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr8:39187249-39187365 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr8:39204094-39204343 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr8:39184952-39185134 | K562 | blood: | n/a | n/a |
5 | BCL11A | chr8:39215146-39215389 | GM12878 | blood: | n/a | n/a |
6 | BCL11A | chr8:39215071-39215373 | GM12878 | blood: | n/a | n/a |
7 | CBX3 | chr8:39184878-39185271 | HCT-116 | colon: | n/a | n/a |
8 | CEBPB | chr8:39225484-39225625 | IMR90 | lung: | n/a | n/a |
9 | CTCF | chr8:39184935-39185180 | H1-hESC | embryonic stem cell: | n/a | n/a |
10 | CTCF | chr8:39185060-39185210 | HL-60 | blood: | n/a | n/a |
11 | CTCF | chr8:39184915-39185305 | IMR90 | lung: | n/a | n/a |
12 | CTCF | chr8:39185309-39185312 | Spleen_OC | spleen: | n/a | n/a |
13 | CTCF | chr8:39185020-39185170 | HUVEC | blood vessel: | n/a | n/a |
14 | CTCF | chr8:39184678-39185583 | A549 | lung: | n/a | n/a |
15 | CTCF | chr8:39185500-39185650 | AG09309 | skin: | n/a | n/a |
16 | CTCF | chr8:39225560-39225710 | HCT-116 | colon: | n/a | n/a |
17 | CTCF | chr8:39185343-39185423 | Gliobla | brain: | n/a | n/a |
18 | CTCF | chr8:39185040-39185190 | HPF | lung: | n/a | n/a |
19 | CTCF | chr8:39185000-39185150 | HUVEC | blood vessel: | n/a | n/a |
20 | CTCF | chr8:39184847-39185284 | K562 | blood: | n/a | n/a |
21 | CTCF | chr8:39185020-39185170 | SAEC | small airway: | n/a | n/a |
22 | CTCF | chr8:39185020-39185170 | GM12867 | blood: | n/a | n/a |
23 | CTCF | chr8:39225660-39225810 | HCFaa | heart: | n/a | chr8:39225708-39225715 chr8:39225701-39225719 chr8:39225696-39225717 |
24 | CTCF | chr8:39185040-39185190 | GM12864 | blood: | n/a | n/a |
25 | CTCF | chr8:39185360-39185510 | GM06990 | blood: | n/a | n/a |
26 | CTCF | chr8:39185040-39185190 | HCPEpiC | choroid plexus: | n/a | n/a |
27 | CTCF | chr8:39185029-39185195 | Pancreas_OC | pancreas: | n/a | n/a |
28 | CTCF | chr8:39185000-39185150 | GM12873 | blood: | n/a | n/a |
29 | CTCF | chr8:39185338-39185436 | K562 | blood: | n/a | n/a |
30 | CTCF | chr8:39184920-39185070 | HFF-Myc | foreskin: | n/a | n/a |
31 | CTCF | chr8:39184893-39185207 | A549 | lung: | n/a | n/a |
32 | CTCF | chr8:39184960-39185110 | GM12873 | blood: | n/a | n/a |
33 | CTCF | chr8:39185040-39185190 | GM12872 | blood: | n/a | n/a |
34 | CTCF | chr8:39184966-39185166 | A549 | lung: | n/a | n/a |
35 | CTCF | chr8:39184960-39185110 | NHEK | skin: | n/a | n/a |
36 | CTCF | chr8:39185020-39185170 | AoAF | blood vessel: | n/a | n/a |
37 | CTCF | chr8:39185347-39185452 | GM13977 | blood: | n/a | n/a |
38 | CTCF | chr8:39185040-39185190 | GM12878 | blood: | n/a | n/a |
39 | CTCF | chr8:39185020-39185170 | GM12870 | blood: | n/a | n/a |
40 | CTCF | chr8:39185020-39185170 | HCT-116 | colon: | n/a | n/a |
41 | CTCF | chr8:39185020-39185170 | RPTEC | kidney: | n/a | n/a |
42 | CTCF | chr8:39185021-39185186 | GM13976 | blood: | n/a | n/a |
43 | CTCF | chr8:39185380-39185530 | GM12864 | blood: | n/a | n/a |
44 | CTCF | chr8:39185040-39185190 | GM12870 | blood: | n/a | n/a |
45 | CTCF | chr8:39184932-39185242 | GM12878 | blood: | n/a | n/a |
46 | CTCF | chr8:39184960-39185110 | GM12866 | blood: | n/a | n/a |
47 | CTCF | chr8:39185348-39185444 | GM12878 | blood: | n/a | n/a |
48 | CTCF | chr8:39185006-39185159 | Fibrobl | skin: | n/a | n/a |
49 | CTCF | chr8:39184803-39185311 | HCT-116 | colon: | n/a | n/a |
50 | CTCF | chr8:39185711-39185715 | GM10266 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:39223182-39223232 | AoSMC | blood vessel: | n/a |
2 | chr8:39196907-39196957 | GM06990 | blood: | n/a |
3 | chr8:39196907-39196957 | Caco-2 | colon: | n/a |
4 | chr8:39223182-39223232 | RPTEC | kidney: | n/a |
5 | chr8:39223182-39223232 | MCF-7 | breast: | n/a |
6 | chr8:39223182-39223232 | NB4 | blood: | n/a |
7 | chr8:39196907-39196957 | SAEC | small airway: | n/a |
8 | chr8:39196907-39196957 | ProgFib | skin: | n/a |
9 | chr8:39223182-39223232 | SKMC | muscle: | n/a |
10 | chr8:39223182-39223232 | ECC-1 | luminal epithelium: | n/a |
11 | chr8:39223182-39223232 | PANC-1 | pancreas: | n/a |
12 | chr8:39196907-39196957 | HRPEpiC | eye: | n/a |
13 | chr8:39223182-39223232 | HCT-116 | colon: | n/a |
14 | chr8:39196907-39196957 | HEK293 | kidney: | embryo |
15 | chr8:39196907-39196957 | HPAEpiC | pulmonary alveolar: | n/a |
16 | chr8:39223182-39223232 | SK-N-MC | brain: | n/a |
17 | chr8:39223182-39223232 | HRE | kidney: | n/a |
18 | chr8:39223182-39223232 | HCPEpiC | choroid plexus: | n/a |
19 | chr8:39223182-39223232 | MCF10A-Er-Src | breast: | n/a |
20 | chr8:39196907-39196957 | AG04449 | skin: | fetal |
21 | chr8:39223182-39223232 | HL-60 | blood: | n/a |
22 | chr8:39223182-39223232 | IMR90 | lung: | fetal |
23 | chr8:39196907-39196957 | GM12891 | blood: | n/a |
24 | chr8:39223182-39223232 | AG09309 | skin: | n/a |
25 | chr8:39196907-39196957 | SK-N-SH | brain: | n/a |
26 | chr8:39196907-39196957 | NHBE | bronchial: | n/a |
27 | chr8:39196907-39196957 | HRCEpiC | kidney: | n/a |
28 | chr8:39196907-39196957 | PANC-1 | pancreas: | n/a |
29 | chr8:39196907-39196957 | T-47D | breast: | n/a |
30 | chr8:39196907-39196957 | HMEC | breast: | n/a |
31 | chr8:39196907-39196957 | Hela-S3 | cervix: | n/a |
32 | chr8:39196907-39196957 | NHDF-neo | bronchial: | n/a |
33 | chr8:39223182-39223232 | Hepatocyte | liver: | n/a |
34 | chr8:39223182-39223232 | AG04450 | lung: | fetal |
35 | chr8:39223182-39223232 | HEEpiC | esophagus: | n/a |
36 | chr8:39196907-39196957 | HCT-116 | colon: | n/a |
37 | chr8:39223182-39223232 | HRCEpiC | kidney: | n/a |
38 | chr8:39196907-39196957 | PFSK-1 | brain: | n/a |
39 | chr8:39223182-39223232 | Caco-2 | colon: | n/a |
40 | chr8:39223182-39223232 | HMEC | breast: | n/a |
41 | chr8:39196907-39196957 | GM19239 | blood: | n/a |
42 | chr8:39223182-39223232 | K562 | blood: | n/a |
43 | chr8:39196907-39196957 | HAEpiC | amniotic membrane: | n/a |
44 | chr8:39223182-39223232 | BE2_C | brain: | n/a |
45 | chr8:39196907-39196957 | HUVEC | blood vessel: | n/a |
46 | chr8:39196907-39196957 | AG04450 | lung: | fetal |
47 | chr8:39223182-39223232 | NT2-D1 | testis: | n/a |
48 | chr8:39196907-39196957 | SKMC | muscle: | n/a |
49 | chr8:39196907-39196957 | ECC-1 | luminal epithelium: | n/a |
50 | chr8:39196907-39196957 | BJ | skin: | n/a |
(count:4 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:39202201..39204201-chr8:39430573..39432669,2 | K562 | blood: | |
2 | chr8:39204717..39207276-chr8:39207847..39209394,2 | K562 | blood: | |
3 | chr8:39204717..39207276-chr8:39207847..39209394,2 | K562 | blood: | |
4 | chr8:38824064..38824622-chr8:39184733..39185545,2 | K562 | blood: |
(count:32 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126157 |
2 | lnc-ADAM32-1 | chr8:39182732-39182797 | NONHSAT147628 |
3 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT147629 |
4 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT126148 |
5 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT147628 |
6 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126152 |
7 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126148 |
8 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT126153 |
9 | lnc-ADAM32-1 | chr8:39203380-39203563 | NONHSAT126148 |
10 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT126150 |
11 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT126155 |
12 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126150 |
13 | lnc-ADAM32-1 | chr8:39182732-39182797 | NONHSAT126148 |
14 | lnc-ADAM32-1 | chr8:39203380-39203563 | NONHSAT147629 |
15 | lnc-ADAM32-1 | chr8:39180489-39181258 | NONHSAT126149 |
16 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126156 |
17 | lnc-ADAM32-1 | chr8:39182732-39182797 | NONHSAT126150 |
18 | lnc-ADAM32-1 | chr8:39192919-39193008 | NONHSAT126156 |
19 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT147628 |
20 | lnc-ADAM32-1 | chr8:39203380-39203563 | NONHSAT126155 |
21 | lnc-ADAM32-1 | chr8:39192919-39193012 | NONHSAT126157 |
22 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126155 |
23 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT126152 |
24 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126151 |
25 | lnc-ADAM32-1 | chr8:39203380-39203563 | NONHSAT147628 |
26 | lnc-ADAM32-1 | chr8:39233198-39233396 | NONHSAT126151 |
27 | lnc-ADAM32-1 | chr8:39182732-39182797 | NONHSAT126157 |
28 | lnc-ADAM32-1 | chr8:39182732-39182797 | NONHSAT126152 |
29 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126154 |
30 | lnc-ADAM32-1 | chr8:39181687-39181858 | NONHSAT126153 |
31 | lnc-ADAM32-1 | chr8:39181838-39181858 | NONHSAT147629 |
32 | lnc-ADAM32-1 | chr8:39182732-39182797 | NONHSAT126151 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ADAM5 | TF binding region |
ADAM5 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs549522879 | chr8:39180899-39180900 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
2 | rs530697701 | chr8:39180912-39180913 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
3 | rs550524980 | chr8:39180930-39180931 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
4 | rs183845084 | chr8:39180937-39180938 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
5 | rs567989087 | chr8:39180976-39180977 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
6 | rs187760135 | chr8:39181018-39181019 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
7 | rs569163503 | chr8:39181093-39181094 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
8 | rs533469543 | chr8:39181221-39181222 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
9 | rs199577980 | chr8:39181242-39181243 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
10 | rs34525881 | chr8:39181256-39181257 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
11 | rs546521073 | chr8:39181697-39181698 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
12 | rs373331411 | chr8:39181731-39181732 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
13 | rs72580367 | chr8:39181738-39181739 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
14 | rs34280617 | chr8:39181739-39181740 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
15 | rs566515439 | chr8:39181742-39181743 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
16 | rs535808722 | chr8:39181745-39181746 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
17 | rs549132841 | chr8:39181757-39181758 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
18 | rs569288359 | chr8:39181793-39181794 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
19 | rs558751420 | chr8:39181796-39181797 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
20 | rs189976706 | chr8:39181798-39181799 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
21 | rs148347936 | chr8:39182760-39182761 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
22 | rs542823779 | chr8:39184069-39184070 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs192810116 | chr8:39184111-39184112 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs10104322 | chr8:39184151-39184152 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
25 | rs201536573 | chr8:39184175-39184176 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs71218324 | chr8:39184193-39184194 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs566706405 | chr8:39184217-39184218 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs545380321 | chr8:39184226-39184227 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs77065008 | chr8:39184248-39184249 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs80024675 | chr8:39184282-39184283 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs139879416 | chr8:39184288-39184289 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs145331523 | chr8:39184302-39184303 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs75245319 | chr8:39184303-39184304 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs147278271 | chr8:39184330-39184331 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs569404198 | chr8:39184351-39184352 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs75157358 | chr8:39184356-39184357 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs60915009 | chr8:39184357-39184358 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs74579930 | chr8:39184381-39184382 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs371305513 | chr8:39184482-39184483 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs149794131 | chr8:39184486-39184487 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs550374047 | chr8:39184498-39184499 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs570209855 | chr8:39184523-39184524 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs538958199 | chr8:39184575-39184576 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs554978424 | chr8:39184587-39184588 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs113319257 | chr8:39184590-39184591 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs557322337 | chr8:39184603-39184604 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs570957752 | chr8:39184615-39184616 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs184562956 | chr8:39184650-39184651 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs566736956 | chr8:39184675-39184676 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs553620781 | chr8:39184709-39184710 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Prostate cancer | 16573809 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Prostate cancer | 21965145 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Melanoma | 18172304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Seminomas | 18059402 | CNVD |
Lung cancer | 18438408 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Immune disease | 21572526 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Kallmann Syndrome 2 | 22470819 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Developmental delay | 21373258 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 17603634 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Testicular cancer | 18059402 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Bladder cancer | 19088036 | CNVD |
Non-muscle invasive bladder neoplasm | 19445696 | CNVD |
Breast cancer | 17001308 | CNVD |
Breast cancer | 17157792 | CNVD |
Cancer | 17001308 | CNVD |
Cancer | 18840272 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Chordoma | 18071362 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Breast cancer | 16608533 | CNVD |
Breast cancer | 21509527 | CNVD |
Breast cancer | 21785460 | CNVD |
abnormal development | 18461090 | CNVD |
Breast cancer | 16620391 | CNVD |
Rhabdomyosarcoma | 16790082 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Breast cancer | 21858162 | CNVD |
Cancer | 20164920 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 20932292 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:39184000-39187000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
2 | chr8:39184600-39187000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
3 | chr8:39184800-39185000 | Enhancers | A549 | lung |
4 | chr8:39184800-39185400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
5 | chr8:39184800-39185400 | Enhancers | HUES48 Cell Line | embryonic stem cell |
6 | chr8:39185400-39187200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
7 | chr8:39185400-39187400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
8 | chr8:39186800-39187000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
9 | chr8:39186800-39188000 | Enhancers | H9 Cell Line | embryonic stem cell |
10 | chr8:39187200-39188000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
11 | chr8:39187200-39188200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
12 | chr8:39187400-39188000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
13 | chr8:39187400-39188200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
14 | chr8:39187600-39188000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
15 | chr8:39188000-39189400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
16 | chr8:39188000-39189400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
17 | chr8:39188200-39189200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
18 | chr8:39189200-39189800 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
19 | chr8:39189400-39189800 | Enhancers | HUES64 Cell Line | embryonic stem cell |
20 | chr8:39189400-39189800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
21 | chr8:39189600-39190000 | Enhancers | Fetal Stomach | stomach |
22 | chr8:39190200-39191000 | Enhancers | Fetal Kidney | kidney |
23 | chr8:39190400-39191600 | Enhancers | Fetal Lung | lung |
24 | chr8:39191200-39191400 | Enhancers | Osteobl | bone |
25 | chr8:39191200-39191600 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
26 | chr8:39210800-39211400 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
27 | chr8:39215000-39215400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
28 | chr8:39221000-39222000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |