No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs542616168 |
chr4:78739325-78739326 |
Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs62302715 |
chr4:78739339-78739340 |
Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs560664320 |
chr4:78739343-78739344 |
Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs372724349 |
chr4:78739357-78739358 |
Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs118114195 |
chr4:78739398-78739399 |
Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs190337289 |
chr4:78739483-78739484 |
Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs62302716 |
chr4:78739536-78739537 |
Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs200442797 |
chr4:78739541-78739542 |
Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs533141537 |
chr4:78739633-78739634 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs566325082 |
chr4:78739652-78739653 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs182581079 |
chr4:78739669-78739670 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs538760961 |
chr4:78739685-78739686 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs535741578 |
chr4:78739698-78739699 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs185757848 |
chr4:78739703-78739704 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs191059277 |
chr4:78739731-78739732 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs565658576 |
chr4:78739738-78739739 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs116543689 |
chr4:78739778-78739779 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs543926539 |
chr4:78739798-78739799 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs557410318 |
chr4:78739831-78739832 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs577340379 |
chr4:78739844-78739845 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs537212903 |
chr4:78739848-78739849 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs6829203 |
chr4:78739891-78739892 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
23 |
rs574206256 |
chr4:78739915-78739916 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs142405311 |
chr4:78739942-78739943 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs559836669 |
chr4:78739961-78739962 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs573259151 |
chr4:78739985-78739986 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs545450002 |
chr4:78740024-78740025 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs6811439 |
chr4:78740066-78740067 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
29 |
rs368945536 |
chr4:78740080-78740081 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs549963628 |
chr4:78740105-78740106 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs6828302 |
chr4:78740132-78740133 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
32 |
rs77103397 |
chr4:78740160-78740161 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs144725638 |
chr4:78740169-78740170 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs386676376 |
chr4:78740170-78740171 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs565860028 |
chr4:78740200-78740201 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs371841161 |
chr4:78740203-78740204 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs373313499 |
chr4:78740204-78740205 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs368900394 |
chr4:78740228-78740229 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs71214371 |
chr4:78740229-78740230 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs367722470 |
chr4:78740245-78740246 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs550976206 |
chr4:78740246-78740247 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs570967867 |
chr4:78740314-78740315 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs536752989 |
chr4:78740350-78740351 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs556827038 |
chr4:78740354-78740355 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs574167915 |
chr4:78740368-78740369 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs368783905 |
chr4:78740380-78740381 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs372837916 |
chr4:78740391-78740392 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs536480981 |
chr4:78740395-78740396 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs377011334 |
chr4:78740418-78740419 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs553611249 |
chr4:78740420-78740421 |
Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS
|
TF binding regionChromatin interactive region
|
8 gene(s)
|
Overlapped CNVs
|
n/a
|