No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs187766850 |
chr1:86821560-86821561 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs543460361 |
chr1:86821571-86821572 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs143652796 |
chr1:86821603-86821604 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs529250057 |
chr1:86821739-86821740 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs17129092 |
chr1:86821746-86821747 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs559622197 |
chr1:86821754-86821755 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs528291050 |
chr1:86821877-86821878 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs551429908 |
chr1:86821892-86821893 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs564834154 |
chr1:86821900-86821901 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs200180150 |
chr1:86821906-86821907 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs369360481 |
chr1:86821910-86821911 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs68126437 |
chr1:86821911-86821912 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs201948631 |
chr1:86821914-86821915 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs200426377 |
chr1:86821915-86821916 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs398053190 |
chr1:86821918-86821919 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs530487083 |
chr1:86821922-86821923 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs550203032 |
chr1:86821925-86821926 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs79579195 |
chr1:86821927-86821928 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs535776774 |
chr1:86821945-86821946 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs549279405 |
chr1:86821952-86821953 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs1182099 |
chr1:86821974-86821975 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs534906791 |
chr1:86821975-86821976 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs558190061 |
chr1:86822040-86822041 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs57534123 |
chr1:86822042-86822043 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
25 |
rs555093268 |
chr1:86822064-86822065 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs574817136 |
chr1:86822088-86822089 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs374484026 |
chr1:86822092-86822093 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs142356442 |
chr1:86822109-86822110 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs199702607 |
chr1:86822116-86822117 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs138813020 |
chr1:86822123-86822124 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs573966982 |
chr1:86822162-86822163 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs368562180 |
chr1:86822169-86822170 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs542908890 |
chr1:86822170-86822171 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs368185410 |
chr1:86822179-86822180 |
Weak transcription Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs117798340 |
chr1:86822204-86822205 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs192480175 |
chr1:86822205-86822206 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs544887352 |
chr1:86822215-86822216 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs368679168 |
chr1:86822216-86822217 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs149805854 |
chr1:86822220-86822221 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs147025866 |
chr1:86822221-86822222 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs372029682 |
chr1:86822223-86822224 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs11810074 |
chr1:86822226-86822227 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
43 |
rs530569725 |
chr1:86822229-86822230 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs385437 |
chr1:86822231-86822232 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
45 |
rs142772711 |
chr1:86822245-86822246 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs114962597 |
chr1:86822246-86822247 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs112831254 |
chr1:86822280-86822281 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs139812168 |
chr1:86822287-86822288 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs376732664 |
chr1:86822289-86822290 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs200753122 |
chr1:86822294-86822295 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|