Variant report

Variant	esv3456915
Chromosome Location	chr2:36409473-36412321
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 175 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:175 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs62651688	chr2:36409474-36409475	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs376064465	chr2:36409485-36409486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs62651689	chr2:36409506-36409507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs62651690	chr2:36409508-36409509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs62651691	chr2:36409540-36409541	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs372440164	chr2:36409566-36409567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs200486421	chr2:36409570-36409571	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs375426357	chr2:36409600-36409601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs201759909	chr2:36409629-36409630	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs138715919	chr2:36409657-36409658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs62651692	chr2:36409668-36409669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs201777052	chr2:36409674-36409675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200407441	chr2:36409702-36409703	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs374978988	chr2:36409712-36409713	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs142702141	chr2:36409854-36409855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs188833274	chr2:36409890-36409891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs182051113	chr2:36409908-36409909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs186200631	chr2:36409931-36409932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs191444892	chr2:36409956-36409957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs180816289	chr2:36409958-36409959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs185439295	chr2:36409984-36409985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs62651693	chr2:36409992-36409993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs369620938	chr2:36410062-36410063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs201328986	chr2:36410067-36410068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs200657517	chr2:36410118-36410119	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs536577769	chr2:36410126-36410127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs554888808	chr2:36410127-36410128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs111206681	chr2:36410136-36410137	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs183277856	chr2:36410137-36410138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs201417579	chr2:36410143-36410144	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs9678062	chr2:36410144-36410145	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs186482833	chr2:36410147-36410148	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs375771375	chr2:36410151-36410152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs573316396	chr2:36410164-36410165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs150706285	chr2:36410171-36410172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs139421810	chr2:36410199-36410200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs149631487	chr2:36410227-36410228	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs144381740	chr2:36410255-36410256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs148778152	chr2:36410283-36410284	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs143795222	chr2:36410311-36410312	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs377591781	chr2:36410339-36410340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs200791143	chr2:36410367-36410368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs202046474	chr2:36410368-36410369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs199869007	chr2:36410388-36410389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs202062571	chr2:36410395-36410396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs199837718	chr2:36410396-36410397	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200843021	chr2:36410416-36410417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs371276318	chr2:36410423-36410424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs201510292	chr2:36410424-36410425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs111215166	chr2:36410427-36410428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Breast cancer	21364760	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	18927303	CNVD
Hereditary gingival fibromatosis	19633868	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Neurocytoma	17123091	CNVD
Autism	22495309	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:36406400-36413800	Weak transcription	Gastric	stomach

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