Variant report

Variant	esv3464360
Chromosome Location	chr4:30279581-30280292
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 180 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:180 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs148703678	chr4:30279586-30279587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs556178795	chr4:30279627-30279628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs576024173	chr4:30279630-30279631	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs200210754	chr4:30279631-30279632	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs191716378	chr4:30279636-30279637	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs116585421	chr4:30279637-30279638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs114015171	chr4:30279639-30279640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs112416727	chr4:30279646-30279647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs199779528	chr4:30279653-30279654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs144776177	chr4:30279658-30279659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs374637751	chr4:30279659-30279660	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs140978500	chr4:30279664-30279665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs113737217	chr4:30279668-30279669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs184984851	chr4:30279674-30279675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs113350078	chr4:30279675-30279676	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs541224711	chr4:30279680-30279681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs77852067	chr4:30279683-30279684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs376864691	chr4:30279686-30279687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs375167758	chr4:30279693-30279694	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs77976188	chr4:30279694-30279695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs528869454	chr4:30279711-30279712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs75340004	chr4:30279713-30279714	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs73223753	chr4:30279716-30279717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs190265896	chr4:30279719-30279720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs547976646	chr4:30279721-30279722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs111800627	chr4:30279722-30279723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs368316322	chr4:30279723-30279724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs546712105	chr4:30279724-30279725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs201741688	chr4:30279737-30279738	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs74960220	chr4:30279739-30279740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs549841637	chr4:30279740-30279741	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs199704978	chr4:30279742-30279743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs372557538	chr4:30279743-30279744	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs61794114	chr4:30279745-30279746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs112269661	chr4:30279750-30279751	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs555427411	chr4:30279751-30279752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs372030296	chr4:30279756-30279757	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs375146764	chr4:30279757-30279758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs201240061	chr4:30279763-30279764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201860995	chr4:30279770-30279771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs77313291	chr4:30279771-30279772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs78670807	chr4:30279773-30279774	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs193197582	chr4:30279775-30279776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs199838802	chr4:30279776-30279777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs369983595	chr4:30279782-30279783	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs372082550	chr4:30279783-30279784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200009554	chr4:30279789-30279790	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs573630417	chr4:30279791-30279792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs542613518	chr4:30279792-30279793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs77996799	chr4:30279797-30279798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
Oral squamous cell carcinoma	17134496	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Lung cancer	18438408	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Cancer	21183584	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Olfactory neuroblastoma	18408657	CNVD
Cancer	22183965	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Tetralogy of Fallot	22912587	CNVD
Renal cell carcinoma	18194544	CNVD
Colorectal cancer	16774939	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30277800-30280400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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