Variant report

Variant	esv3471519
Chromosome Location	chr11:85429687-85472395
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:614)
CpG islands
(count:1099)
Chromatin interactive
region (count:93)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:614 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr11:85437160-85437164	K562	blood:	n/a	n/a
2	ATF3	chr11:85459311-85459985	A549	lung:	n/a	n/a
3	ATF3	chr11:85429941-85430582	A549	lung:	n/a	n/a
4	ATF3	chr11:85430045-85430590	HCT-116	colon:	n/a	n/a
5	ATF3	chr11:85437022-85437235	K562	blood:	n/a	n/a
6	BCL3	chr11:85459306-85460048	A549	lung:	n/a	n/a
7	BCL3	chr11:85429956-85430607	A549	lung:	n/a	n/a
8	BCL3	chr11:85429789-85430630	A549	lung:	n/a	n/a
9	CBX3	chr11:85436418-85437521	HCT-116	colon:	n/a	n/a
10	CBX3	chr11:85433968-85434612	HCT-116	colon:	n/a	n/a
11	CBX3	chr11:85436571-85437484	HCT-116	colon:	n/a	n/a
12	CBX3	chr11:85429945-85430631	HCT-116	colon:	n/a	n/a
13	CBX3	chr11:85434014-85434630	HCT-116	colon:	n/a	n/a
14	CEBPB	chr11:85435902-85436102	K562	blood:	n/a	chr11:85435989-85436000
15	CEBPB	chr11:85450530-85450847	HepG2	liver:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
16	CEBPB	chr11:85435856-85436163	IMR90	lung:	n/a	chr11:85435989-85436000
17	CEBPB	chr11:85436811-85437316	HCT-116	colon:	n/a	n/a
18	CEBPB	chr11:85429913-85430649	HCT-116	colon:	n/a	n/a
19	CEBPB	chr11:85436954-85437343	Hela-S3	cervix:	n/a	n/a
20	CEBPB	chr11:85435889-85436106	Hela-S3	cervix:	n/a	chr11:85435989-85436000
21	CEBPB	chr11:85429913-85430587	A549	lung:	n/a	n/a
22	CEBPB	chr11:85470952-85471285	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr11:85436706-85437444	HCT-116	colon:	n/a	n/a
24	CEBPB	chr11:85433983-85434244	HepG2	liver:	n/a	chr11:85434072-85434085 chr11:85434073-85434084 chr11:85434074-85434083
25	CEBPB	chr11:85451606-85451830	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr11:85433865-85434608	MCF-7	breast:	n/a	chr11:85434072-85434085 chr11:85434073-85434084 chr11:85434074-85434083
27	CEBPB	chr11:85433970-85434233	A549	lung:	n/a	chr11:85434072-85434085 chr11:85434073-85434084 chr11:85434074-85434083
28	CEBPB	chr11:85433923-85434245	IMR90	lung:	n/a	chr11:85434072-85434085 chr11:85434073-85434084 chr11:85434074-85434083
29	CEBPB	chr11:85433879-85434592	MCF-7	breast:	n/a	chr11:85434072-85434085 chr11:85434073-85434084 chr11:85434074-85434083
30	CEBPB	chr11:85470939-85471214	ECC-1	luminal epithelium:	n/a	n/a
31	CEBPB	chr11:85470946-85471251	A549	lung:	n/a	n/a
32	CEBPB	chr11:85453740-85454559	HCT-116	colon:	n/a	n/a
33	CEBPB	chr11:85454000-85454341	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr11:85469749-85469863	A549	lung:	n/a	chr11:85469817-85469826
35	CEBPB	chr11:85459571-85460198	A549	lung:	n/a	n/a
36	CEBPB	chr11:85457839-85458035	Hela-S3	cervix:	n/a	n/a
37	CEBPB	chr11:85435845-85436161	HepG2	liver:	n/a	chr11:85435989-85436000
38	CEBPB	chr11:85450545-85450852	Hela-S3	cervix:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
39	CEBPB	chr11:85470950-85471431	A549	lung:	n/a	n/a
40	CEBPB	chr11:85460646-85460756	HepG2	liver:	n/a	n/a
41	CEBPB	chr11:85433957-85434215	K562	blood:	n/a	chr11:85434072-85434085 chr11:85434073-85434084 chr11:85434074-85434083
42	CEBPB	chr11:85460565-85460818	A549	lung:	n/a	n/a
43	CEBPB	chr11:85470922-85471280	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr11:85470816-85471428	HCT-116	colon:	n/a	n/a
45	CEBPB	chr11:85430123-85430385	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr11:85450575-85450778	K562	blood:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
47	CEBPB	chr11:85450526-85450834	A549	lung:	n/a	chr11:85450662-85450673 chr11:85450663-85450674
48	CEBPB	chr11:85435842-85436151	A549	lung:	n/a	chr11:85435989-85436000
49	CEBPB	chr11:85459303-85459997	A549	lung:	n/a	n/a
50	CEBPB	chr11:85470917-85471335	IMR90	lung:	n/a	n/a

(count:1099 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:85469117-85469167	T-47D	breast:	n/a
2	chr11:85469117-85469167	T-47D	breast:	n/a
3	chr11:85430657-85430707	ECC-1	luminal epithelium:	n/a
4	chr11:85469117-85469167	AG10803	skin:	n/a
5	chr11:85469919-85469969	HCPEpiC	choroid plexus:	n/a
6	chr11:85438818-85438868	SK-N-SH_RA	brain:	n/a
7	chr11:85469117-85469167	GM19239	blood:	n/a
8	chr11:85438947-85438997	T-47D	breast:	n/a
9	chr11:85438818-85438868	AG10803	skin:	n/a
10	chr11:85451557-85451607	SK-N-SH_RA	brain:	n/a
11	chr11:85438818-85438868	K562	blood:	n/a
12	chr11:85430629-85430679	HRPEpiC	eye:	n/a
13	chr11:85460604-85460654	H1-hESC	embryonic stem cell:	embryo
14	chr11:85430070-85430120	CMK	blood:	n/a
15	chr11:85451557-85451607	H1-hESC	embryonic stem cell:	embryo
16	chr11:85453669-85453719	HEEpiC	esophagus:	n/a
17	chr11:85438947-85438997	Hepatocyte	liver:	n/a
18	chr11:85438818-85438868	AoSMC	blood vessel:	n/a
19	chr11:85437589-85437639	T-47D	breast:	n/a
20	chr11:85430070-85430120	AG04450	lung:	fetal
21	chr11:85430657-85430707	NHDF-neo	bronchial:	n/a
22	chr11:85453669-85453719	PANC-1	pancreas:	n/a
23	chr11:85437589-85437639	A549	lung:	n/a
24	chr11:85469117-85469167	LNCaP	prostate:	n/a
25	chr11:85438818-85438868	A549	lung:	n/a
26	chr11:85430070-85430120	HCPEpiC	choroid plexus:	n/a
27	chr11:85469117-85469167	HepG2	liver:	n/a
28	chr11:85438818-85438868	ovcar-3	ovarian:	n/a
29	chr11:85460604-85460654	HL-60	blood:	n/a
30	chr11:85469117-85469167	HAEpiC	amniotic membrane:	n/a
31	chr11:85469117-85469167	PrEC	prostate:	n/a
32	chr11:85438947-85438997	HCT-116	colon:	n/a
33	chr11:85438773-85438823	SAEC	small airway:	n/a
34	chr11:85469117-85469167	GM12892	blood:	n/a
35	chr11:85430070-85430120	NHBE	bronchial:	n/a
36	chr11:85438818-85438868	PANC-1	pancreas:	n/a
37	chr11:85430657-85430707	GM12891	blood:	n/a
38	chr11:85430634-85430684	GM19239	blood:	n/a
39	chr11:85469247-85469297	HUVEC	blood vessel:	n/a
40	chr11:85469919-85469969	SKMC	muscle:	n/a
41	chr11:85438818-85438868	GM19239	blood:	n/a
42	chr11:85437589-85437639	BE2_C	brain:	n/a
43	chr11:85470458-85470508	AG09309	skin:	n/a
44	chr11:85437589-85437639	SK-N-SH	brain:	n/a
45	chr11:85436135-85436185	GM19239	blood:	n/a
46	chr11:85438947-85438997	BJ	skin:	n/a
47	chr11:85451557-85451607	SK-N-SH	brain:	n/a
48	chr11:85437589-85437639	HNPCEpiC	eye:	n/a
49	chr11:85469117-85469167	SAEC	small airway:	n/a
50	chr11:85438773-85438823	SKMC	muscle:	n/a

(count:93 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:85427809..85429920-chr11:85433567..85435878,3	MCF-7	breast:
2	chr11:85446235..85448098-chr11:85532932..85535818,2	MCF-7	breast:
3	chr11:85434042..85436173-chr11:85445300..85448317,5	MCF-7	breast:
4	chr11:85374169..85377247-chr11:85434867..85438072,3	MCF-7	breast:
5	chr11:85427809..85429920-chr11:85433567..85435878,3	MCF-7	breast:
6	chr11:85449141..85453316-chr11:85456820..85460896,4	MCF-7	breast:
7	chr11:85374586..85376226-chr11:85456033..85458381,2	K562	blood:
8	chr11:85445751..85448371-chr11:85941133..85943891,2	MCF-7	breast:
9	chr11:85452340..85455544-chr11:85456750..85459606,3	K562	blood:
10	chr11:85432781..85434564-chr11:85442681..85445528,2	MCF-7	breast:
11	chr11:85470232..85472552-chr11:85473605..85477376,4	K562	blood:
12	chr11:85462033..85463782-chr11:85520601..85522192,2	MCF-7	breast:
13	chr11:85449141..85453316-chr11:85456820..85460896,4	MCF-7	breast:
14	chr11:85456354..85459698-chr11:85460209..85463531,4	MCF-7	breast:
15	chr11:85447296..85450521-chr11:85450822..85453106,4	MCF-7	breast:
16	chr11:85434439..85436977-chr11:85459317..85462236,2	MCF-7	breast:
17	chr11:85404945..85406929-chr11:85457970..85459498,2	MCF-7	breast:
18	chr11:85445267..85447565-chr11:85447614..85449688,2	MCF-7	breast:
19	chr11:85459647..85463395-chr11:85466382..85468116,3	K562	blood:
20	chr11:85449386..85450931-chr11:85453758..85455391,2	K562	blood:
21	chr11:85445028..85447969-chr11:85452486..85454600,2	K562	blood:
22	chr11:85414305..85416177-chr11:85432869..85434542,2	MCF-7	breast:
23	chr11:85449386..85450931-chr11:85453758..85455391,2	K562	blood:
24	chr11:85469322..85470979-chr11:85520431..85523173,2	MCF-7	breast:
25	chr11:85446570..85449228-chr11:85451047..85454870,3	MCF-7	breast:
26	chr11:85434008..85435703-chr11:85538641..85540808,2	MCF-7	breast:
27	chr11:85434348..85438681-chr11:85520824..85523815,4	MCF-7	breast:
28	chr11:85460961..85463869-chr11:85465217..85468287,3	MCF-7	breast:
29	chr11:85406368..85408240-chr11:85432667..85435313,3	MCF-7	breast:
30	chr11:85466239..85468587-chr11:85472162..85474352,2	MCF-7	breast:
31	chr11:85466013..85467547-chr11:85470379..85472711,2	MCF-7	breast:
32	chr11:85433923..85435734-chr11:85518099..85520604,2	MCF-7	breast:
33	chr11:85453893..85455528-chr11:85457587..85459184,2	MCF-7	breast:
34	chr11:85448431..85450003-chr11:85541669..85543570,2	MCF-7	breast:
35	chr11:85445724..85449951-chr11:85518014..85522628,5	MCF-7	breast:
36	chr11:85461323..85463573-chr11:85539177..85540857,2	MCF-7	breast:
37	chr11:85449712..85452124-chr11:85536910..85538885,2	MCF-7	breast:
38	chr11:85456348..85458453-chr11:85459854..85462602,2	K562	blood:
39	chr11:85445028..85447969-chr11:85452486..85454600,2	K562	blood:
40	chr11:85460961..85463869-chr11:85465217..85468287,3	MCF-7	breast:
41	chr11:85459682..85462503-chr11:85466829..85468700,3	MCF-7	breast:
42	chr11:85446570..85449228-chr11:85451047..85454870,3	MCF-7	breast:
43	chr11:85463747..85466661-chr11:85473937..85475998,2	MCF-7	breast:
44	chr11:85451589..85453294-chr11:85503015..85505521,2	MCF-7	breast:
45	chr11:85456882..85459698-chr17:57916750..57918708,2	MCF-7	breast:
46	chr11:85470667..85472897-chr11:85479422..85481165,2	K562	blood:
47	chr11:85438614..85440584-chr11:85468892..85470720,2	MCF-7	breast:
48	chr11:85338344..85340985-chr11:85434050..85436369,2	K562	blood:
49	chr11:85434029..85438059-chr11:85455702..85460015,5	MCF-7	breast:
50	chr11:85428619..85430275-chr11:85519411..85522192,2	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CCDC89-6	chr11:85452619-85452847	expReg_chr11_8315_-
2	lnc-CCDC89-4	chr11:85429833-85430211	NONHSAT023447
3	lnc-CCDC89-4	chr11:85429833-85430223	NONHSAT023446
4	lnc-AP000974.1-1	chr11:85468803-85469112	NONHSAT023448
5	lnc-CCDC89-7	chr11:85455444-85456066	expReg_chr11_8320_-

No data

Variant related genes	Relation type
SYTL2	TF binding region
SYTL2	CpG island
ENSG00000137504	chromatin interactions
ENSG00000199004	chromatin interactions
ENSG00000150672	chromatin interactions
ENSG00000137501	chromatin interactions
ENSG00000171204	chromatin interactions

Extended variants
information (count: 1740 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:1740 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs552125332	chr11:85429696-85429697	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs571626346	chr11:85429710-85429711	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs569770309	chr11:85429722-85429723	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs538908544	chr11:85429736-85429737	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs529706652	chr11:85429754-85429755	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs553951308	chr11:85429765-85429766	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs115218567	chr11:85429810-85429811	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs371153408	chr11:85429814-85429815	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs374162746	chr11:85429818-85429819	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs367707072	chr11:85429828-85429829	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs114609010	chr11:85429852-85429853	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
12	rs114810966	chr11:85429860-85429861	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
13	rs115283647	chr11:85429871-85429872	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
14	rs372017034	chr11:85429929-85429930	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
15	rs191296454	chr11:85429965-85429966	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
16	rs183100374	chr11:85429987-85429988	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
17	rs577211824	chr11:85430053-85430054	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
18	rs187791476	chr11:85430174-85430175	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
19	rs189859206	chr11:85430185-85430186	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
20	rs570282713	chr11:85430217-85430218	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
21	rs35381992	chr11:85430229-85430230	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs541982642	chr11:85430250-85430251	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs563257940	chr11:85430251-85430252	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs536796036	chr11:85430369-85430370	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs74468168	chr11:85430380-85430381	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs551897434	chr11:85430381-85430382	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs570069468	chr11:85430390-85430391	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs678376	chr11:85430397-85430398	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs547726011	chr11:85430411-85430412	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs566018715	chr11:85430414-85430415	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs536474757	chr11:85430427-85430428	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs555111333	chr11:85430433-85430434	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs547828170	chr11:85430437-85430438	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs537107751	chr11:85430439-85430440	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs3216102	chr11:85430443-85430444	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs570060856	chr11:85430485-85430486	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs595340	chr11:85430488-85430489	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs113467944	chr11:85430522-85430523	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs507737	chr11:85430536-85430537	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs559089215	chr11:85430538-85430539	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs577349700	chr11:85430543-85430544	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs570242591	chr11:85430548-85430549	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs183207231	chr11:85430551-85430552	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs371833910	chr11:85430558-85430559	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs112447673	chr11:85430570-85430571	Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs555444831	chr11:85430608-85430609	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs187942451	chr11:85430635-85430636	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs541677404	chr11:85430638-85430639	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs563459704	chr11:85430727-85430728	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs192514812	chr11:85430774-85430775	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Ovarian neoplasms	16753589	CNVD
Breast cancer	16608533	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Colorectal cancer	16912164	CNVD
Mental retardation	17847001	CNVD
Melanoma	19509136	CNVD
Sudden cardiac death	19188705	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ductal carcinoma	22052326	CNVD
Obesity	20622171	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Attention deficit hyperactivity disorder	22241247	CNVD
Breast cancer	21958427	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Cancer	17440070	CNVD

Chromatin state (count:1223 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:85396800-85429800	Weak transcription	Stomach Mucosa	stomach
2	chr11:85397200-85438600	Weak transcription	Colonic Mucosa	Colon
3	chr11:85397800-85430000	Weak transcription	Ovary	ovary
4	chr11:85406200-85429800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr11:85412000-85436800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr11:85412000-85438000	Weak transcription	Primary T helper cells fromperipheralblood	blood
7	chr11:85413800-85430000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr11:85417600-85453000	Weak transcription	Gastric	stomach
9	chr11:85418400-85436400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr11:85422400-85430200	Weak transcription	Fetal Kidney	kidney
11	chr11:85422600-85448600	Weak transcription	Fetal Intestine Large	intestine
12	chr11:85422800-85448200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
13	chr11:85423000-85429800	Weak transcription	Rectal Smooth Muscle	rectum
14	chr11:85423600-85430000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr11:85424000-85448600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr11:85424600-85429800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr11:85425600-85429800	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr11:85427000-85430600	Strong transcription	Rectal Mucosa Donor 31	rectum
19	chr11:85427200-85430200	Active TSS	NHLF	lung
20	chr11:85427200-85430600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr11:85427200-85430600	Active TSS	Fetal Muscle Trunk	muscle
22	chr11:85427200-85433000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr11:85427400-85430600	Active TSS	HSMMtube	muscle
24	chr11:85427600-85429800	Weak transcription	H1 Cell Line	embryonic stem cell
25	chr11:85427600-85430400	Active TSS	NHDF-Ad	bronchial
26	chr11:85427800-85429800	Weak transcription	Psoas Muscle	Psoas
27	chr11:85427800-85430000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr11:85427800-85430600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr11:85428200-85430600	Active TSS	HSMM	muscle
30	chr11:85428400-85430200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr11:85428400-85430600	Active TSS	Brain Angular Gyrus	brain
32	chr11:85428600-85429800	Flanking Active TSS	A549	lung
33	chr11:85428600-85430000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr11:85428600-85430800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
35	chr11:85428600-85431000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr11:85428600-85432000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr11:85428800-85430000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
38	chr11:85428800-85430400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr11:85429000-85429800	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr11:85429000-85430000	Active TSS	Fetal Lung	lung
41	chr11:85429000-85430000	Weak transcription	Small Intestine	intestine
42	chr11:85429000-85430200	Active TSS	ES-I3 Cell Line	embryonic stem cell
43	chr11:85429000-85430600	Active TSS	Brain Hippocampus Middle	brain
44	chr11:85429000-85430600	Active TSS	Brain Inferior Temporal Lobe	brain
45	chr11:85429000-85430600	Active TSS	Duodenum Smooth Muscle	Duodenum
46	chr11:85429200-85429800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr11:85429200-85429800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr11:85429200-85429800	Weak transcription	Fetal Brain Male	brain
49	chr11:85429200-85430200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
50	chr11:85429400-85429800	Enhancers	H9 Cell Line	embryonic stem cell

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