Variant report

Variant	esv3474964
Chromosome Location	chr11:106787042-106791340
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 151 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:151 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs573180097	chr11:106787113-106787114	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs540548578	chr11:106787124-106787125	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs577895456	chr11:106787130-106787131	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs61902987	chr11:106787135-106787136	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs573960353	chr11:106787140-106787141	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs180880451	chr11:106787149-106787150	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs183766174	chr11:106787201-106787202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs562838686	chr11:106787257-106787258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs189560942	chr11:106787273-106787274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs546003547	chr11:106787278-106787279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs4754174	chr11:106787288-106787289	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs376086504	chr11:106787295-106787296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs528364433	chr11:106787308-106787309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs117614907	chr11:106787309-106787310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs74960175	chr11:106787377-106787378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs528882890	chr11:106787388-106787389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs550595065	chr11:106787407-106787408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs568847126	chr11:106787416-106787417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs181510631	chr11:106787458-106787459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs562207638	chr11:106787477-106787478	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs557904830	chr11:106787479-106787480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs566739549	chr11:106787548-106787549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs537271341	chr11:106787552-106787553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs186687622	chr11:106787609-106787610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs555643619	chr11:106787678-106787679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs574322998	chr11:106787731-106787732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs537840966	chr11:106787759-106787760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs112877956	chr11:106787825-106787826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs556554327	chr11:106787855-106787856	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs76981758	chr11:106787870-106787871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs142185296	chr11:106787883-106787884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs564237423	chr11:106787977-106787978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs575708457	chr11:106787982-106787983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs111677792	chr11:106788092-106788093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs138494540	chr11:106788134-106788135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs564611055	chr11:106788165-106788166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs370442359	chr11:106788185-106788186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs373148948	chr11:106788200-106788201	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs377276195	chr11:106788211-106788212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs533641111	chr11:106788214-106788215	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs191937653	chr11:106788352-106788353	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs371151152	chr11:106788413-106788414	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs375443378	chr11:106788440-106788441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs562527158	chr11:106788461-106788462	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs532832262	chr11:106788471-106788472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs551072066	chr11:106788493-106788494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs566678963	chr11:106788560-106788561	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs534123385	chr11:106788563-106788564	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs549593356	chr11:106788601-106788602	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs181832334	chr11:106788672-106788673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Obesity	19966786	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106786200-106806800	Weak transcription	Fetal Lung	lung
2	chr11:106786600-106787200	Enhancers	Fetal Heart	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links