Variant report

Variant	esv3475242
Chromosome Location	chr6:33248677-33250829
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:41)
CpG islands
(count:366)
Chromatin interactive
region (count:13)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:41 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:33249329-33249388	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr6:33248772-33248774	K562	blood:	n/a	n/a
3	POLR2A	chr6:33238799-33249598	PANC-1	pancreas:	n/a	n/a
4	POLR2A	chr6:33248110-33248848	GM12878	blood:	n/a	n/a
5	POLR2A	chr6:33249245-33249446	GM12878	blood:	n/a	n/a
6	POLR2A	chr6:33249011-33249888	K562	blood:	n/a	n/a
7	POLR2A	chr6:33249384-33249526	HUVEC	blood vessel:	n/a	n/a
8	POLR2A	chr6:33249898-33249913	K562	blood:	n/a	n/a
9	POLR2A	chr6:33248864-33249929	HepG2	liver:	n/a	n/a
10	POLR2A	chr6:33250658-33250690	HepG2	liver:	n/a	n/a
11	POLR2A	chr6:33247721-33248837	HL-60	blood:	n/a	n/a
12	POLR2A	chr6:33248995-33249158	GM12878	blood:	n/a	n/a
13	POLR2A	chr6:33248712-33248878	Hela-S3	cervix:	n/a	n/a
14	POLR2A	chr6:33248331-33248794	GM12878	blood:	n/a	n/a
15	POLR2A	chr6:33248825-33249467	SK-N-MC	brain:	n/a	n/a
16	POLR2A	chr6:33247727-33248764	GM12892	blood:	n/a	n/a
17	POLR2A	chr6:33249388-33249437	MCF-7	breast:	n/a	n/a
18	POLR2A	chr6:33249101-33249176	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr6:33247583-33248780	SK-N-MC	brain:	n/a	n/a
20	POLR2A	chr6:33249714-33249883	Hela-S3	cervix:	n/a	n/a
21	POLR2A	chr6:33248691-33248703	Hela-S3	cervix:	n/a	n/a
22	POLR2A	chr6:33250238-33250657	HepG2	liver:	n/a	n/a
23	POLR2A	chr6:33248761-33249486	GM12891	blood:	n/a	n/a
24	POLR2A	chr6:33249047-33249177	MCF-7	breast:	n/a	n/a
25	POLR2A	chr6:33247646-33248862	K562	blood:	n/a	n/a
26	POLR2A	chr6:33238740-33248719	HepG2	liver:	n/a	n/a
27	POLR2A	chr6:33247678-33248732	ECC-1	luminal epithelium:	n/a	n/a
28	POLR2A	chr6:33249359-33249361	HUVEC	blood vessel:	n/a	n/a
29	POLR2A	chr6:33247700-33248835	GM12878	blood:	n/a	n/a
30	POLR2A	chr6:33248974-33249445	K562	blood:	n/a	n/a
31	POLR2A	chr6:33248723-33248735	HepG2	liver:	n/a	n/a
32	POLR2A	chr6:33250072-33250627	K562	blood:	n/a	n/a
33	POLR2A	chr6:33250019-33250232	HepG2	liver:	n/a	n/a
34	POLR2A	chr6:33248373-33248720	GM12878	blood:	n/a	n/a
35	POLR2A	chr6:33248821-33248891	K562	blood:	n/a	n/a
36	POLR2A	chr6:33249448-33249469	MCF-7	breast:	n/a	n/a
37	POLR2A	chr6:33248553-33248755	K562	blood:	n/a	n/a
38	POLR2A	chr6:33248738-33248748	HepG2	liver:	n/a	n/a
39	POLR2A	chr6:33250684-33250770	K562	blood:	n/a	n/a
40	POLR2A	chr6:33248854-33249591	GM12892	blood:	n/a	n/a
41	POLR2A	chr6:33249038-33249202	GM12878	blood:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:33248629-33248679	Jurkat	blood:	n/a
2	chr6:33249075-33249125	NB4	blood:	n/a
3	chr6:33249075-33249125	GM12878	blood:	n/a
4	chr6:33248629-33248679	GM12891	blood:	n/a
5	chr6:33248714-33248764	GM12878	blood:	n/a
6	chr6:33249087-33249137	GM12878	blood:	n/a
7	chr6:33248629-33248679	HIPEpiC	eye:	n/a
8	chr6:33248687-33248737	HNPCEpiC	eye:	n/a
9	chr6:33248687-33248737	NB4	blood:	n/a
10	chr6:33248714-33248764	T-47D	breast:	n/a
11	chr6:33248714-33248764	NHDF-neo	bronchial:	n/a
12	chr6:33248687-33248737	HAEpiC	amniotic membrane:	n/a
13	chr6:33249087-33249137	BJ	skin:	n/a
14	chr6:33248707-33248757	SKMC	muscle:	n/a
15	chr6:33248629-33248679	GM06990	blood:	n/a
16	chr6:33248714-33248764	HRPEpiC	eye:	n/a
17	chr6:33249087-33249137	PrEC	prostate:	n/a
18	chr6:33248687-33248737	Hela-S3	cervix:	n/a
19	chr6:33248714-33248764	U87	brain:	n/a
20	chr6:33249087-33249137	GM19239	blood:	n/a
21	chr6:33248687-33248737	ECC-1	luminal epithelium:	n/a
22	chr6:33249075-33249125	MCF10A-Er-Src	breast:	n/a
23	chr6:33248629-33248679	T-47D	breast:	n/a
24	chr6:33248629-33248679	GM19239	blood:	n/a
25	chr6:33248687-33248737	SAEC	small airway:	n/a
26	chr6:33249075-33249125	GM06990	blood:	n/a
27	chr6:33248629-33248679	HAEpiC	amniotic membrane:	n/a
28	chr6:33248687-33248737	SK-N-SH	brain:	n/a
29	chr6:33249075-33249125	K562	blood:	n/a
30	chr6:33248687-33248737	HCPEpiC	choroid plexus:	n/a
31	chr6:33248707-33248757	SK-N-MC	brain:	n/a
32	chr6:33249075-33249125	Caco-2	colon:	n/a
33	chr6:33248714-33248764	BE2_C	brain:	n/a
34	chr6:33248629-33248679	AG10803	skin:	n/a
35	chr6:33249075-33249125	AG09319	gingival:	n/a
36	chr6:33248687-33248737	PFSK-1	brain:	n/a
37	chr6:33249075-33249125	CMK	blood:	n/a
38	chr6:33248707-33248757	PANC-1	pancreas:	n/a
39	chr6:33248629-33248679	NT2-D1	testis:	n/a
40	chr6:33248707-33248757	HCF	heart:	n/a
41	chr6:33248629-33248679	HL-60	blood:	n/a
42	chr6:33248714-33248764	HEEpiC	esophagus:	n/a
43	chr6:33249075-33249125	SK-N-SH	brain:	n/a
44	chr6:33248687-33248737	HEK293	kidney:	embryo
45	chr6:33248629-33248679	SKMC	muscle:	n/a
46	chr6:33248714-33248764	HepG2	liver:	n/a
47	chr6:33249087-33249137	HCF	heart:	n/a
48	chr6:33249087-33249137	HCPEpiC	choroid plexus:	n/a
49	chr6:33248687-33248737	MCF-7	breast:	n/a
50	chr6:33248714-33248764	HCT-116	colon:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:33165702..33182742-chr6:33234718..33250379,54	K562	blood:
2	chr6:33214775..33224346-chr6:33236521..33248678,40	K562	blood:
3	chr6:32935752..32938246-chr6:33246522..33249779,4	K562	blood:
4	chr6:33248031..33250805-chr6:33381162..33383303,2	MCF-7	breast:
5	chr6:33247918..33248886-chr6:33256671..33257416,2	K562	blood:
6	chr6:33247934..33250111-chr6:33290391..33292325,2	MCF-7	breast:
7	chr6:33165514..33167984-chr6:33250652..33252906,2	K562	blood:
8	chr6:33242542..33249529-chr6:33381747..33388277,18	K562	blood:
9	chr6:32936522..32939181-chr6:33247297..33249779,3	K562	blood:
10	chr6:33162573..33165564-chr6:33247072..33249621,2	K562	blood:
11	chr6:33244680..33251060-chr6:33375427..33382644,12	MCF-7	breast:
12	chr6:32939326..32941038-chr6:33246903..33249950,3	MCF-7	breast:
13	chr6:33242863..33248981-chr6:33374531..33379553,10	MCF-7	breast:

No data

Variant related genes	Relation type
WDR46	TF binding region
WDR46	CpG island
ENSG00000204256	chromatin interactions
ENSG00000204227	chromatin interactions
ENSG00000204220	chromatin interactions
ENSG00000204209	chromatin interactions
ENSG00000112511	chromatin interactions
ENSG00000199036	chromatin interactions
ENSG00000204228	chromatin interactions
ENSG00000112473	chromatin interactions
ENSG00000112514	chromatin interactions
ENSG00000204231	chromatin interactions
ENSG00000202441	chromatin interactions
ENSG00000223837	chromatin interactions
ENSG00000232940	chromatin interactions
ENSG00000263756	chromatin interactions
ENSG00000204257	chromatin interactions
ENSG00000197283	chromatin interactions
ENSG00000227057	chromatin interactions

Extended variants
information (count: 82 )
Associated
traits (count: 111 )

Variant overlapped rSNPs/rCNVs (count:82 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372868692	chr6:33248681-33248682	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
2	rs375789917	chr6:33248688-33248689	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
3	rs369856029	chr6:33248779-33248780	Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
4	rs374694625	chr6:33248824-33248825	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
5	rs370442121	chr6:33248882-33248883	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
6	rs79072396	chr6:33248936-33248937	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
7	rs552290916	chr6:33248942-33248943	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
8	rs570507998	chr6:33248961-33248962	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
9	rs150406255	chr6:33248962-33248963	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
10	rs547010649	chr6:33248977-33248978	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
11	rs114542815	chr6:33249024-33249025	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
12	rs113597172	chr6:33249087-33249088	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
13	rs79247533	chr6:33249096-33249097	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
14	rs376846099	chr6:33249104-33249105	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
15	rs575426735	chr6:33249158-33249159	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
16	rs539593638	chr6:33249190-33249191	Weak transcription Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
17	rs375445633	chr6:33249238-33249239	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
18	rs189704103	chr6:33249241-33249242	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
19	rs79356638	chr6:33249254-33249255	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
20	rs368387625	chr6:33249259-33249260	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
21	rs138303355	chr6:33249260-33249261	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
22	rs368747796	chr6:33249315-33249316	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
23	rs149640500	chr6:33249369-33249370	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
24	rs374022909	chr6:33249401-33249402	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
25	rs574628689	chr6:33249427-33249428	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
26	rs377110358	chr6:33249482-33249483	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
27	rs541668960	chr6:33249520-33249521	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
28	rs144336500	chr6:33249549-33249550	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
29	rs539424471	chr6:33249618-33249619	Weak transcription Strong transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
30	rs370351655	chr6:33249623-33249624	Weak transcription Strong transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
31	rs139286353	chr6:33249720-33249721	Weak transcription Strong transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
32	rs143506340	chr6:33249721-33249722	Weak transcription Strong transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
33	rs564152336	chr6:33249744-33249745	Weak transcription Strong transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
34	rs541778546	chr6:33249759-33249760	Weak transcription Strong transcription	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
35	rs377380594	chr6:33249950-33249951	Weak transcription Strong transcription	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs370556757	chr6:33249959-33249960	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
37	rs528089118	chr6:33249963-33249964	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
38	rs74857356	chr6:33250013-33250014	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
39	rs368543279	chr6:33250041-33250042	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
40	rs182325115	chr6:33250044-33250045	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
41	rs568660163	chr6:33250076-33250077	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
42	rs116121440	chr6:33250083-33250084	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs147173514	chr6:33250084-33250085	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
44	rs372922488	chr6:33250118-33250119	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
45	rs369171787	chr6:33250119-33250120	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
46	rs59473078	chr6:33250148-33250149	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs187794736	chr6:33250149-33250150	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
48	rs78728949	chr6:33250157-33250158	Weak transcription Strong transcription	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
49	rs557847290	chr6:33250214-33250215	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
50	rs563813000	chr6:33250258-33250259	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:111)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Myelofibrosis	22110671	CNVD
Incontinentia Pigmenti	22033527	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Encephalopathy	20692195	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Immune disease	17576883	CNVD
Multiple myeloma	16616336	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Anaplastic thyroid cancer	18753363	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Urothelial carcinoma	21177765	CNVD

Chromatin state (count:197 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33240600-33248800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:33241800-33248800	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:33244800-33249200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:33245400-33248800	Strong transcription	Muscle Satellite Cultured Cells	--
5	chr6:33245600-33249400	Strong transcription	HMEC	breast
6	chr6:33245600-33250400	Strong transcription	NHLF	lung
7	chr6:33245600-33251400	Weak transcription	NHDF-Ad	bronchial
8	chr6:33245600-33255200	Strong transcription	NHEK	skin
9	chr6:33245600-33255400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
10	chr6:33245800-33248800	Genic enhancers	Spleen	Spleen
11	chr6:33245800-33250400	Weak transcription	HUVEC	blood vessel
12	chr6:33245800-33254400	Weak transcription	Fetal Kidney	kidney
13	chr6:33245800-33255600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr6:33245800-33255800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:33245800-33255800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:33245800-33256000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr6:33245800-33256000	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr6:33245800-33256400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr6:33246000-33249800	Weak transcription	NH-A	brain
20	chr6:33246000-33251800	Weak transcription	Small Intestine	intestine
21	chr6:33246000-33252600	Weak transcription	Psoas Muscle	Psoas
22	chr6:33246000-33255200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr6:33246000-33255600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr6:33246000-33255600	Strong transcription	Fetal Intestine Large	intestine
25	chr6:33246000-33255800	Strong transcription	Fetal Stomach	stomach
26	chr6:33246000-33255800	Weak transcription	Right Atrium	heart
27	chr6:33246200-33248800	Strong transcription	Right Ventricle	heart
28	chr6:33246200-33249200	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr6:33246200-33250000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr6:33246200-33251400	Strong transcription	Brain Cingulate Gyrus	brain
31	chr6:33246200-33252600	Strong transcription	Fetal Brain Female	brain
32	chr6:33246200-33253000	Strong transcription	Dnd41	blood
33	chr6:33246200-33255000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr6:33246200-33255800	Strong transcription	HUES64 Cell Line	embryonic stem cell
35	chr6:33246200-33255800	Strong transcription	Cortex derived primary cultured neurospheres	brain
36	chr6:33246200-33255800	Strong transcription	Brain Anterior Caudate	brain
37	chr6:33246400-33249200	Genic enhancers	Primary T helper cells fromperipheralblood	blood
38	chr6:33246400-33249200	Strong transcription	Pancreas	Pancrea
39	chr6:33246400-33250000	Weak transcription	Primary hematopoietic stem cells	blood
40	chr6:33246400-33250800	Strong transcription	Colonic Mucosa	Colon
41	chr6:33246400-33255400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr6:33246400-33255400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr6:33246400-33255400	Strong transcription	Lung	lung
44	chr6:33246400-33255800	Strong transcription	Sigmoid Colon	Sigmoid Colon
45	chr6:33246400-33255800	Strong transcription	Osteobl	bone
46	chr6:33246600-33248800	Strong transcription	iPS-15b Cell Line	embryonic stem cell
47	chr6:33246600-33249400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr6:33246600-33249400	Genic enhancers	Primary T helper cells PMA-I stimulated	--
49	chr6:33246600-33249600	Weak transcription	Stomach Mucosa	stomach
50	chr6:33246600-33250400	Strong transcription	Brain Substantia Nigra	brain

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