Variant report

Variant	esv3480389
Chromosome Location	chr8:36273626-36279622
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 90 )
Associated
traits (count: 116 )

Variant overlapped rSNPs/rCNVs (count:90 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs544565079	chr8:36273648-36273649	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs541775428	chr8:36273680-36273681	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs529946343	chr8:36273723-36273724	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs78966688	chr8:36273741-36273742	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs548320697	chr8:36273764-36273765	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs200823506	chr8:36273766-36273767	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs191440550	chr8:36273797-36273798	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs558985172	chr8:36277655-36277656	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs554388729	chr8:36277656-36277657	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs113297131	chr8:36277666-36277667	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs74640718	chr8:36277667-36277668	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs368086943	chr8:36277670-36277671	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs552523654	chr8:36277691-36277692	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs574220301	chr8:36277695-36277696	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs541506892	chr8:36277744-36277745	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs183726320	chr8:36277749-36277750	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs188998085	chr8:36277818-36277819	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs139304286	chr8:36277857-36277858	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs545934816	chr8:36277869-36277870	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs564230662	chr8:36277886-36277887	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs149430938	chr8:36277916-36277917	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs541461366	chr8:36277919-36277920	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs540155304	chr8:36277923-36277924	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs558054258	chr8:36277925-36277926	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs530254035	chr8:36277943-36277944	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs117457284	chr8:36277971-36277972	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs570278849	chr8:36277972-36277973	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs192961283	chr8:36277985-36277986	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs182878590	chr8:36278020-36278021	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs187166459	chr8:36278023-36278024	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs534963829	chr8:36278043-36278044	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs576286735	chr8:36278100-36278101	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs143639321	chr8:36278148-36278149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs148090842	chr8:36278195-36278196	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs118153061	chr8:36278197-36278198	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs191526637	chr8:36278198-36278199	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs575256601	chr8:36278252-36278253	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs141857833	chr8:36278260-36278261	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs146084640	chr8:36278262-36278263	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs140101527	chr8:36278284-36278285	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs73578637	chr8:36278292-36278293	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs559828099	chr8:36278302-36278303	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs551178562	chr8:36278314-36278315	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs542160474	chr8:36278322-36278323	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs563642470	chr8:36278335-36278336	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs531000961	chr8:36278365-36278366	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs73578638	chr8:36278377-36278378	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs141737106	chr8:36278431-36278432	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs541150379	chr8:36278473-36278474	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs528799163	chr8:36278531-36278532	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:116)

Disease	PMID	Source
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Pancreatic cancer	21811587	CNVD
Multiple myeloma	16461302	CNVD
Developmental delay	21373258	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Multiple myeloma	16616336	CNVD
Disorders of sex development	21048976	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	21806811	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hepatocellular carcinoma	16750200	CNVD
Bladder cancer	19088036	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	20459607	CNVD
Renal cell carcinoma	18765545	CNVD
Colorectal cancer	16912164	CNVD
Neuroticism	17667963	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	17001308	CNVD
Breast cancer	17157792	CNVD
Cancer	17001308	CNVD
Cancer	18840272	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	18382360	CNVD
Ductal carcinoma	18381933	CNVD
Breast cancer	21328542	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Intellectual disability	22045946	CNVD
Lung cancer	17925434	CNVD
Uveal melanoma	20484589	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21364760	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	19651600	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:36271400-36273800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:36277600-36279000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:36279000-36282200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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