No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs524468 |
chr12:371786-371787 |
Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs563628461 |
chr12:371790-371791 |
Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs529326143 |
chr12:371830-371831 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs550610245 |
chr12:371840-371841 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs368082174 |
chr12:371852-371853 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs533467329 |
chr12:371935-371936 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs552006160 |
chr12:372035-372036 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs566965623 |
chr12:372088-372089 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs534436193 |
chr12:372097-372098 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs555971755 |
chr12:372124-372125 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs567414137 |
chr12:372145-372146 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs537929364 |
chr12:372175-372176 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs556204538 |
chr12:372189-372190 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs541407624 |
chr12:372192-372193 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs533403394 |
chr12:372196-372197 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs577664333 |
chr12:372204-372205 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs548915874 |
chr12:372226-372227 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs73604849 |
chr12:372285-372286 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding regionCpG island
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
19 |
rs572232255 |
chr12:372325-372326 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs542836189 |
chr12:372344-372345 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs528546257 |
chr12:372351-372352 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs560746793 |
chr12:372358-372359 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs183667999 |
chr12:372371-372372 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs1548904 |
chr12:372382-372383 |
Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
25 |
rs151010095 |
chr12:372403-372404 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs183854313 |
chr12:372410-372411 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs140851785 |
chr12:372414-372415 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs797765 |
chr12:372438-372439 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
29 |
rs568493118 |
chr12:372495-372496 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs560867326 |
chr12:372526-372527 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs76907414 |
chr12:372616-372617 |
Weak transcription Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs369996227 |
chr12:372655-372656 |
Weak transcription Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs549637877 |
chr12:372703-372704 |
Weak transcription Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs567819117 |
chr12:372757-372758 |
Weak transcription Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs34328511 |
chr12:372770-372771 |
Weak transcription Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs16928976 |
chr12:372773-372774 |
Weak transcription Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
37 |
rs549873540 |
chr12:372820-372821 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs35585051 |
chr12:372851-372852 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs538812740 |
chr12:372959-372960 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs10744561 |
chr12:372968-372969 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs145514791 |
chr12:372970-372971 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs553467540 |
chr12:373008-373009 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs572353471 |
chr12:373023-373024 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs551796119 |
chr12:373078-373079 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs74057651 |
chr12:373079-373080 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
46 |
rs575786758 |
chr12:373086-373087 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs579526 |
chr12:373120-373121 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs562674454 |
chr12:373121-373122 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs578016164 |
chr12:373160-373161 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs368268362 |
chr12:373164-373165 |
Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|