Variant report

Variant	esv3496691
Chromosome Location	chr1:209541075-209543370
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr1:209540447-209541132	IMR90	lung:	n/a	n/a
2	CTCF	chr1:209541560-209541710	HEK293	kidney:	n/a	n/a
3	CTCF	chr1:209541580-209541730	HEEpiC	esophagus:	n/a	n/a
4	CTCF	chr1:209542580-209542730	HMF	breast:	n/a	n/a
5	CTCF	chr1:209541220-209541370	BJ	skin:	n/a	n/a
6	E2F4	chr1:209540452-209541132	MCF10A-Er-Src	breast:	n/a	chr1:209540934-209540945 chr1:209540934-209540945 chr1:209540625-209540637 chr1:209540934-209540945
7	E2F4	chr1:209542409-209543545	MCF10A-Er-Src	breast:	n/a	chr1:209542952-209542964 chr1:209542956-209542963 chr1:209542956-209542963 chr1:209542956-209542963 chr1:209542955-209542964
8	EP300	chr1:209542385-209543073	SK-N-SH_RA	brain:	n/a	chr1:209543053-209543067 chr1:209543057-209543071 chr1:209543051-209543065 chr1:209543052-209543066 chr1:209543059-209543073
9	EP300	chr1:209542072-209543196	SK-N-SH	brain:	n/a	chr1:209543053-209543067 chr1:209543057-209543071 chr1:209543051-209543065 chr1:209543052-209543066 chr1:209543059-209543073
10	EP300	chr1:209542395-209543030	SK-N-SH_RA	brain:	n/a	n/a
11	EP300	chr1:209542112-209543221	SK-N-SH	brain:	n/a	chr1:209543053-209543067 chr1:209543057-209543071 chr1:209543051-209543065 chr1:209543052-209543066 chr1:209543059-209543073
12	EP300	chr1:209540448-209541242	SK-N-SH	brain:	n/a	n/a
13	FOS	chr1:209542241-209542983	MCF10A-Er-Src	breast:	n/a	chr1:209542671-209542680 chr1:209542672-209542681 chr1:209542675-209542683
14	FOS	chr1:209540393-209541090	MCF10A-Er-Src	breast:	n/a	n/a
15	FOS	chr1:209542198-209543007	MCF10A-Er-Src	breast:	n/a	chr1:209542671-209542680 chr1:209542672-209542681 chr1:209542675-209542683
16	FOS	chr1:209542303-209542968	MCF10A-Er-Src	breast:	n/a	chr1:209542671-209542680 chr1:209542672-209542681 chr1:209542675-209542683
17	FOS	chr1:209542209-209543090	MCF10A-Er-Src	breast:	n/a	chr1:209542671-209542680 chr1:209543000-209543009 chr1:209542672-209542681 chr1:209542675-209542683
18	FOSL2	chr1:209540403-209541244	SK-N-SH	brain:	n/a	n/a
19	FOSL2	chr1:209542454-209542947	A549	lung:	n/a	chr1:209542671-209542680 chr1:209542672-209542681 chr1:209542675-209542683
20	FOSL2	chr1:209542152-209543027	SK-N-SH	brain:	n/a	chr1:209542184-209542194 chr1:209542185-209542193 chr1:209542184-209542194 chr1:209542181-209542192 chr1:209542671-209542680 chr1:209543000-209543009 chr1:209542184-209542194 chr1:209542184-209542194 chr1:209542672-209542681 chr1:209542675-209542683
21	FOSL2	chr1:209542481-209542959	SK-N-SH	brain:	n/a	chr1:209542671-209542680 chr1:209542672-209542681 chr1:209542675-209542683
22	FOXM1	chr1:209542270-209543049	SK-N-SH	brain:	n/a	n/a
23	FOXM1	chr1:209542107-209543145	SK-N-SH	brain:	n/a	n/a
24	GATA3	chr1:209541559-209541879	T-47D	breast:	n/a	n/a
25	GATA3	chr1:209542132-209543190	SK-N-SH	brain:	n/a	n/a
26	GATA3	chr1:209541476-209541992	SK-N-SH	brain:	n/a	n/a
27	GATA3	chr1:209540364-209541210	SK-N-SH	brain:	n/a	n/a
28	GATA3	chr1:209541337-209543157	SK-N-SH	brain:	n/a	n/a
29	JUND	chr1:209542037-209543239	SK-N-SH	brain:	n/a	chr1:209542184-209542194 chr1:209542185-209542193 chr1:209542184-209542194 chr1:209542181-209542192 chr1:209542671-209542680 chr1:209543000-209543009 chr1:209542184-209542194 chr1:209542184-209542194 chr1:209542672-209542681 chr1:209542675-209542683
30	JUND	chr1:209542213-209543095	SK-N-SH	brain:	n/a	chr1:209542671-209542680 chr1:209543000-209543009 chr1:209542672-209542681 chr1:209542675-209542683
31	JUND	chr1:209542133-209543075	SK-N-SH	brain:	n/a	chr1:209542184-209542194 chr1:209542185-209542193 chr1:209542184-209542194 chr1:209542181-209542192 chr1:209542671-209542680 chr1:209543000-209543009 chr1:209542184-209542194 chr1:209542184-209542194 chr1:209542672-209542681 chr1:209542675-209542683
32	MAFF	chr1:209540962-209541085	K562	blood:	n/a	n/a
33	MAFF	chr1:209540858-209541166	HepG2	liver:	n/a	n/a
34	MAFK	chr1:209540609-209541199	IMR90	lung:	n/a	n/a
35	MAFK	chr1:209542558-209543324	IMR90	lung:	n/a	n/a
36	MAFK	chr1:209540860-209541178	HepG2	liver:	n/a	n/a
37	MAFK	chr1:209540972-209541113	K562	blood:	n/a	n/a
38	MAFK	chr1:209542991-209543044	HepG2	liver:	n/a	n/a
39	MAFK	chr1:209540857-209541195	HepG2	liver:	n/a	n/a
40	MAX	chr1:209542372-209543048	SK-N-SH	brain:	n/a	n/a
41	MAX	chr1:209542356-209543086	SK-N-SH	brain:	n/a	n/a
42	MYC	chr1:209542499-209543000	MCF10A-Er-Src	breast:	n/a	n/a
43	MYC	chr1:209542209-209543044	MCF10A-Er-Src	breast:	n/a	n/a
44	NFIC	chr1:209542343-209543092	SK-N-SH	brain:	n/a	n/a
45	NFIC	chr1:209542174-209543308	SK-N-SH	brain:	n/a	n/a
46	PBX3	chr1:209542211-209543177	SK-N-SH	brain:	n/a	chr1:209542978-209542987
47	PBX3	chr1:209542276-209543175	SK-N-SH	brain:	n/a	chr1:209542978-209542987
48	PBX3	chr1:209540337-209541224	SK-N-SH	brain:	n/a	n/a
49	POLR2A	chr1:209542514-209542883	SK-N-SH	brain:	n/a	n/a
50	POLR2A	chr1:209542454-209542911	U87	brain:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:209541276-209541326	MCF10A-Er-Src	breast:	n/a
2	chr1:209541276-209541326	U87	brain:	n/a
3	chr1:209541276-209541326	Jurkat	blood:	n/a
4	chr1:209541276-209541326	PrEC	prostate:	n/a
5	chr1:209541276-209541326	Hepatocyte	liver:	n/a
6	chr1:209541276-209541326	AG04450	lung:	fetal
7	chr1:209541276-209541326	HRE	kidney:	n/a
8	chr1:209541276-209541326	BJ	skin:	n/a
9	chr1:209541276-209541326	PANC-1	pancreas:	n/a
10	chr1:209541276-209541326	LNCaP	prostate:	n/a
11	chr1:209541276-209541326	HEEpiC	esophagus:	n/a
12	chr1:209541276-209541326	NB4	blood:	n/a
13	chr1:209541276-209541326	Caco-2	colon:	n/a
14	chr1:209541276-209541326	AG10803	skin:	n/a
15	chr1:209541276-209541326	T-47D	breast:	n/a
16	chr1:209541276-209541326	HUVEC	blood vessel:	n/a
17	chr1:209541276-209541326	HL-60	blood:	n/a
18	chr1:209541276-209541326	HCF	heart:	n/a
19	chr1:209541276-209541326	GM12878	blood:	n/a
20	chr1:209541276-209541326	SK-N-SH_RA	brain:	n/a
21	chr1:209541276-209541326	HCPEpiC	choroid plexus:	n/a
22	chr1:209541276-209541326	AoSMC	blood vessel:	n/a
23	chr1:209541276-209541326	GM19239	blood:	n/a
24	chr1:209541276-209541326	AG04449	skin:	fetal
25	chr1:209541276-209541326	ECC-1	luminal epithelium:	n/a
26	chr1:209541276-209541326	NHDF-neo	bronchial:	n/a
27	chr1:209541276-209541326	ovcar-3	ovarian:	n/a
28	chr1:209541276-209541326	AG09319	gingival:	n/a
29	chr1:209541276-209541326	HEK293	kidney:	embryo
30	chr1:209541276-209541326	NHBE	bronchial:	n/a
31	chr1:209541276-209541326	CMK	blood:	n/a
32	chr1:209541276-209541326	HRPEpiC	eye:	n/a
33	chr1:209541276-209541326	ProgFib	skin:	n/a
34	chr1:209541276-209541326	HCM	heart:	n/a
35	chr1:209541276-209541326	SAEC	small airway:	n/a
36	chr1:209541276-209541326	K562	blood:	n/a
37	chr1:209541276-209541326	HMEC	breast:	n/a
38	chr1:209541276-209541326	HIPEpiC	eye:	n/a
39	chr1:209541276-209541326	BE2_C	brain:	n/a
40	chr1:209541276-209541326	NH-A	brain:	n/a
41	chr1:209541276-209541326	RPTEC	kidney:	n/a
42	chr1:209541276-209541326	GM12892	blood:	n/a
43	chr1:209541276-209541326	IMR90	lung:	fetal
44	chr1:209541276-209541326	HCT-116	colon:	n/a
45	chr1:209541276-209541326	NT2-D1	testis:	n/a
46	chr1:209541276-209541326	SK-N-SH	brain:	n/a
47	chr1:209541276-209541326	GM12891	blood:	n/a
48	chr1:209541276-209541326	HAEpiC	amniotic membrane:	n/a
49	chr1:209541276-209541326	H1-hESC	embryonic stem cell:	embryo
50	chr1:209541276-209541326	SKMC	muscle:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:209542346..209543898-chr1:209584985..209586763,2	MCF-7	breast:
2	chr1:209541024..209542920-chr1:209555785..209557291,2	MCF-7	breast:
3	chr1:209527253..209544360-chr1:209599669..209610889,45	MCF-7	breast:
4	chr1:209535501..209537810-chr1:209541839..209543791,2	K562	blood:
5	chr1:209532175..209545038-chr1:209598052..209610156,35	MCF-7	breast:
6	chr1:209399241..209400998-chr1:209541638..209543398,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CAMK1G-2	chr1:209541234-209541357	ENSG00000231648
2	lnc-CAMK1G-2	chr1:209541007-209541129	ENSG00000231648
3	lnc-CAMK1G-2	chr1:209541760-209541814	ENSG00000231648

Variant related genes	Relation type
ENSG00000231648	TF binding region
ENSG00000231648	CpG island
ENSG00000230937	chromatin interactions

Extended variants
information (count: 85 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:85 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs559571116	chr1:209541115-209541116	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
2	rs148746761	chr1:209541138-209541139	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs116213116	chr1:209541150-209541151	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs563592493	chr1:209541202-209541203	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs530951883	chr1:209541220-209541221	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs142142934	chr1:209541244-209541245	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
7	rs78364972	chr1:209541248-209541249	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
8	rs528747755	chr1:209541277-209541278	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
9	rs546833380	chr1:209541282-209541283	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
10	rs181554607	chr1:209541320-209541321	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
11	rs562417070	chr1:209541357-209541358	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
12	rs34217130	chr1:209541395-209541396	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs557841728	chr1:209541418-209541419	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs569613797	chr1:209541432-209541433	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs41274826	chr1:209541444-209541445	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs533093056	chr1:209541447-209541448	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs532569904	chr1:209541462-209541463	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs574016689	chr1:209541490-209541491	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs534906864	chr1:209541498-209541499	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs553250998	chr1:209541517-209541518	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs577922825	chr1:209541549-209541550	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs544842980	chr1:209541562-209541563	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs186140337	chr1:209541568-209541569	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs575629219	chr1:209541571-209541572	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs191919181	chr1:209541574-209541575	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs552581483	chr1:209541614-209541615	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs560939576	chr1:209541644-209541645	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs528809250	chr1:209541646-209541647	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs182506136	chr1:209541681-209541682	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs557586067	chr1:209541699-209541700	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs565195118	chr1:209541711-209541712	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs532757562	chr1:209541729-209541730	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs370540152	chr1:209541733-209541734	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs550869061	chr1:209541742-209541743	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs528757151	chr1:209541755-209541756	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs536732604	chr1:209541806-209541807	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
37	rs549040006	chr1:209541815-209541816	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs55684110	chr1:209541832-209541833	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs568614551	chr1:209541855-209541856	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs534558871	chr1:209541977-209541978	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs55717527	chr1:209541991-209541992	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs577831500	chr1:209542096-209542097	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs538853662	chr1:209542114-209542115	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs556861448	chr1:209542166-209542167	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs575731821	chr1:209542185-209542186	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs61819904	chr1:209542207-209542208	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs542749036	chr1:209542248-209542249	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs560997323	chr1:209542258-209542259	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs9804114	chr1:209542295-209542296	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs185953962	chr1:209542346-209542347	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21611746	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
Macular degeneration	22558131	CNVD
Alzheimer''s disease	21403675	CNVD
Multiple myeloma	16461302	CNVD
van der Woude syndrome	22470819	CNVD
van der Woude syndrome	20818247	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	17060936	CNVD
Atypical hemolytic uremic syndrome	19861685	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Ovarian clear cell carcinoma	19293255	CNVD

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:209526400-209545600	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr1:209529800-209547000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:209535400-209543800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr1:209535800-209542200	Enhancers	NHEK	skin
5	chr1:209535800-209550800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr1:209536000-209545200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:209536000-209545600	Enhancers	HMEC	breast
8	chr1:209536800-209548600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr1:209537600-209548600	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr1:209538000-209543200	Weak transcription	Fetal Thymus	thymus
11	chr1:209538000-209547200	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr1:209538600-209542200	Weak transcription	HSMMtube	muscle
13	chr1:209539800-209543200	Enhancers	NH-A	brain
14	chr1:209539800-209545600	Enhancers	Fetal Brain Male	brain
15	chr1:209540000-209541400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr1:209540000-209542400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr1:209540000-209542400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr1:209540000-209542800	Enhancers	Placenta Amnion	Placenta Amnion
19	chr1:209540000-209542800	Enhancers	HSMM	muscle
20	chr1:209540200-209541200	Flanking Active TSS	Osteobl	bone
21	chr1:209540200-209542400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr1:209540200-209543000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr1:209540200-209543200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr1:209540200-209543400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr1:209540200-209544600	Enhancers	Fetal Brain Female	brain
26	chr1:209540400-209543000	Enhancers	Fetal Muscle Leg	muscle
27	chr1:209540400-209549200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
28	chr1:209540600-209541400	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr1:209540600-209542200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
30	chr1:209540600-209546200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr1:209540800-209541200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr1:209540800-209541800	Enhancers	Esophagus	oesophagus
33	chr1:209540800-209542200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr1:209540800-209542200	Weak transcription	Fetal Stomach	stomach
35	chr1:209540800-209542400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr1:209540800-209542400	Enhancers	Muscle Satellite Cultured Cells	--
37	chr1:209541200-209542200	Enhancers	Osteobl	bone
38	chr1:209541200-209548600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr1:209541400-209541600	Enhancers	H9 Cell Line	embryonic stem cell
40	chr1:209541400-209541800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr1:209541600-209542400	Enhancers	Hela-S3	cervix
42	chr1:209541800-209542200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr1:209541800-209542200	Weak transcription	Esophagus	oesophagus
44	chr1:209541800-209543200	Enhancers	NHLF	lung
45	chr1:209542000-209543000	Enhancers	NHDF-Ad	bronchial
46	chr1:209542200-209542400	Enhancers	Esophagus	oesophagus
47	chr1:209542200-209542600	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr1:209542200-209542600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr1:209542200-209542600	Enhancers	Fetal Lung	lung
50	chr1:209542200-209542600	Enhancers	Rectal Smooth Muscle	rectum

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