Variant report

Variant	esv3497669
Chromosome Location	chr12:376766-385839
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:56)
CpG islands
(count:61)
Chromatin interactive
region (count:7)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:56 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr12:382502-382775	GM12878	blood:	n/a	n/a
2	BCL3	chr12:377133-378098	A549	lung:	n/a	n/a
3	CTCF	chr12:376720-376870	SAEC	small airway:	n/a	n/a
4	CTCF	chr12:382320-382470	HCPEpiC	choroid plexus:	n/a	n/a
5	FOXA1	chr12:382698-383077	T-47D	breast:	n/a	chr12:382894-382909 chr12:382860-382875
6	FOXA1	chr12:383279-383584	T-47D	breast:	n/a	chr12:383516-383528
7	FOXA1	chr12:382677-382977	T-47D	breast:	n/a	chr12:382894-382909 chr12:382860-382875
8	HNF4A	chr12:380373-380573	HepG2	liver:	n/a	chr12:380519-380534 chr12:380520-380534 chr12:380519-380534 chr12:380518-380536 chr12:380519-380534 chr12:380521-380533 chr12:380520-380533 chr12:380519-380534 chr12:380519-380534 chr12:380521-380533
9	MAFK	chr12:382695-382869	HepG2	liver:	n/a	n/a
10	POLR2A	chr12:376855-377471	GM12878	blood:	n/a	n/a
11	POLR2A	chr12:378196-378571	SK-N-SH	brain:	n/a	n/a
12	POLR2A	chr12:381438-381887	K562	blood:	n/a	n/a
13	POLR2A	chr12:377185-377548	H1-neurons	neurons:	n/a	n/a
14	POLR2A	chr12:376899-376979	MCF10A-Er-Src	breast:	n/a	n/a
15	POLR2A	chr12:382112-382765	HL-60	blood:	n/a	n/a
16	POLR2A	chr12:379305-379354	MCF10A-Er-Src	breast:	n/a	n/a
17	POLR2A	chr12:376663-378544	A549	lung:	n/a	n/a
18	POLR2A	chr12:377203-377590	H1-neurons	neurons:	n/a	n/a
19	POLR2A	chr12:377276-377440	GM12878	blood:	n/a	n/a
20	POLR2A	chr12:384647-384675	HepG2	liver:	n/a	n/a
21	POLR2A	chr12:378592-378655	HUVEC	blood vessel:	n/a	n/a
22	POLR2A	chr12:376886-376887	GM12878	blood:	n/a	n/a
23	POLR2A	chr12:376257-377929	HepG2	liver:	n/a	n/a
24	POLR2A	chr12:384962-385168	Hela-S3	cervix:	n/a	n/a
25	POLR2A	chr12:378976-379041	GM12878	blood:	n/a	n/a
26	POLR2A	chr12:378709-379122	HUVEC	blood vessel:	n/a	n/a
27	POLR2A	chr12:379772-380539	K562	blood:	n/a	n/a
28	POLR2A	chr12:378980-379214	SK-N-SH	brain:	n/a	n/a
29	POLR2A	chr12:380368-380416	Hela-S3	cervix:	n/a	n/a
30	POLR2A	chr12:384427-384629	HepG2	liver:	n/a	n/a
31	POLR2A	chr12:385127-385571	Hela-S3	cervix:	n/a	n/a
32	POLR2A	chr12:378285-379260	HepG2	liver:	n/a	n/a
33	POLR2A	chr12:379937-380000	H1-hESC	embryonic stem cell:	n/a	n/a
34	POLR2A	chr12:377812-377823	HUVEC	blood vessel:	n/a	n/a
35	POLR2A	chr12:384683-384714	HepG2	liver:	n/a	n/a
36	POLR2A	chr12:383860-383946	Hela-S3	cervix:	n/a	n/a
37	POLR2A	chr12:381350-381367	HUVEC	blood vessel:	n/a	n/a
38	POLR2A	chr12:379847-379946	HepG2	liver:	n/a	n/a
39	POLR2A	chr12:377348-379340	K562	blood:	n/a	n/a
40	POLR2A	chr12:377019-377024	K562	blood:	n/a	n/a
41	POLR2A	chr12:377307-377352	GM12878	blood:	n/a	n/a
42	POLR2A	chr12:380626-380733	HUVEC	blood vessel:	n/a	n/a
43	POLR2A	chr12:381060-381250	K562	blood:	n/a	n/a
44	POLR2A	chr12:376743-377129	H1-neurons	neurons:	n/a	n/a
45	POLR2A	chr12:384623-385661	HepG2	liver:	n/a	n/a
46	POLR2A	chr12:382305-382321	H1-hESC	embryonic stem cell:	n/a	n/a
47	POLR2A	chr12:383831-383858	Hela-S3	cervix:	n/a	n/a
48	POLR2A	chr12:384637-385151	GM12878	blood:	n/a	n/a
49	POLR2A	chr12:384668-385847	K562	blood:	n/a	n/a
50	POLR2A	chr12:385463-386170	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:378771-378821	Hela-S3	cervix:	n/a
2	chr12:378771-378821	U87	brain:	n/a
3	chr12:378771-378821	ovcar-3	ovarian:	n/a
4	chr12:378771-378821	GM06990	blood:	n/a
5	chr12:378771-378821	AoSMC	blood vessel:	n/a
6	chr12:378771-378821	AG04449	skin:	fetal
7	chr12:378771-378821	AG04450	lung:	fetal
8	chr12:378771-378821	MCF-7	breast:	n/a
9	chr12:378771-378821	HEEpiC	esophagus:	n/a
10	chr12:378771-378821	HRPEpiC	eye:	n/a
11	chr12:378771-378821	HCT-116	colon:	n/a
12	chr12:378771-378821	CMK	blood:	n/a
13	chr12:378771-378821	PFSK-1	brain:	n/a
14	chr12:378771-378821	LNCaP	prostate:	n/a
15	chr12:378771-378821	Jurkat	blood:	n/a
16	chr12:378771-378821	SAEC	small airway:	n/a
17	chr12:378771-378821	H1-hESC	embryonic stem cell:	embryo
18	chr12:378771-378821	NT2-D1	testis:	n/a
19	chr12:378771-378821	GM12892	blood:	n/a
20	chr12:378771-378821	Hepatocyte	liver:	n/a
21	chr12:378771-378821	HL-60	blood:	n/a
22	chr12:378771-378821	Caco-2	colon:	n/a
23	chr12:378771-378821	AG09309	skin:	n/a
24	chr12:378771-378821	IMR90	lung:	fetal
25	chr12:378771-378821	HEK293	kidney:	embryo
26	chr12:378771-378821	SKMC	muscle:	n/a
27	chr12:378771-378821	GM19239	blood:	n/a
28	chr12:378771-378821	T-47D	breast:	n/a
29	chr12:378771-378821	SK-N-MC	brain:	n/a
30	chr12:378771-378821	ECC-1	luminal epithelium:	n/a
31	chr12:378771-378821	BE2_C	brain:	n/a
32	chr12:378771-378821	HCPEpiC	choroid plexus:	n/a
33	chr12:378771-378821	HIPEpiC	eye:	n/a
34	chr12:378771-378821	HCF	heart:	n/a
35	chr12:378771-378821	AG09319	gingival:	n/a
36	chr12:378771-378821	NHBE	bronchial:	n/a
37	chr12:378771-378821	NH-A	brain:	n/a
38	chr12:378771-378821	PANC-1	pancreas:	n/a
39	chr12:378771-378821	BJ	skin:	n/a
40	chr12:378771-378821	ProgFib	skin:	n/a
41	chr12:378771-378821	HCM	heart:	n/a
42	chr12:378771-378821	PrEC	prostate:	n/a
43	chr12:378771-378821	HRE	kidney:	n/a
44	chr12:378771-378821	MCF10A-Er-Src	breast:	n/a
45	chr12:378771-378821	SK-N-SH	brain:	n/a
46	chr12:378771-378821	HMEC	breast:	n/a
47	chr12:378771-378821	HRCEpiC	kidney:	n/a
48	chr12:378771-378821	SK-N-SH_RA	brain:	n/a
49	chr12:378771-378821	A549	lung:	n/a
50	chr12:378771-378821	NHDF-neo	bronchial:	n/a

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:381899..385111-chr12:386819..388918,3	K562	blood:
2	chr12:371815..373339-chr12:375834..377443,2	K562	blood:
3	chr12:378409..380462-chr12:383368..386178,2	MCF-7	breast:
4	chr12:371815..374343-chr12:375834..377592,4	K562	blood:
5	chr12:381899..384416-chr12:386819..388918,2	K562	blood:
6	chr12:378409..380462-chr12:383368..386178,2	MCF-7	breast:
7	chr12:371632..373367-chr12:383696..385601,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KDM5A-1	chr12:383120-386289	ENSG00000261799.1

No data

Variant related genes	Relation type
SLC6A13	TF binding region
SLC6A13	CpG island
ENSG00000010379	chromatin interactions

Extended variants
information (count: 373 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:373 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192313512	chr12:376776-376777	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs557142435	chr12:376836-376837	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs143208254	chr12:376839-376840	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs370648276	chr12:376863-376864	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs183261968	chr12:376896-376897	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs147072883	chr12:376929-376930	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs540619689	chr12:376962-376963	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs138358832	chr12:376966-376967	Weak transcription Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs374651333	chr12:377135-377136	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs540262269	chr12:377151-377152	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs555402245	chr12:377155-377156	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs375237954	chr12:377162-377163	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs186171926	chr12:377163-377164	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs544468997	chr12:377174-377175	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs562561377	chr12:377176-377177	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs10848650	chr12:377207-377208	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs190737101	chr12:377211-377212	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs549644587	chr12:377224-377225	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs34594848	chr12:377243-377244	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs11832251	chr12:377252-377253	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs564631856	chr12:377278-377279	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs528561066	chr12:377289-377290	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs369851158	chr12:377298-377299	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs116375598	chr12:377334-377335	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs182969655	chr12:377335-377336	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs529546658	chr12:377350-377351	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs150608192	chr12:377351-377352	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs187319896	chr12:377354-377355	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs192696185	chr12:377365-377366	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs200494375	chr12:377406-377407	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs529898432	chr12:377412-377413	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs182860028	chr12:377418-377419	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs566611512	chr12:377448-377449	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs533866608	chr12:377546-377547	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs79653077	chr12:377554-377555	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs139683484	chr12:377590-377591	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs187456093	chr12:377608-377609	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs193270458	chr12:377706-377707	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs565721873	chr12:377720-377721	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs566753773	chr12:377727-377728	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs527290964	chr12:377768-377769	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs370797522	chr12:377775-377776	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs577837556	chr12:377791-377792	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs184601894	chr12:377855-377856	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
45	rs545234056	chr12:377889-377890	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
46	rs560079452	chr12:377894-377895	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
47	rs526282	chr12:377904-377905	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs116158154	chr12:377916-377917	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
49	rs371990568	chr12:377933-377934	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
50	rs114671349	chr12:377941-377942	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Glaucoma	21310917	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Squamous cell cancer	19607727	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Mental retardation	17847001	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
abnormal development	18461090	CNVD
Ovarian cancer	20844748	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21509527	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Autism	22495309	CNVD
Ovarian cancer	21720365	CNVD
Myelodysplastic syndrome	21251322	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:221 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:371800-376800	Weak transcription	Brain Anterior Caudate	brain
2	chr12:372000-379200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr12:372400-377000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr12:372400-377200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr12:372400-377200	Weak transcription	HepG2	liver
6	chr12:372400-393600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr12:373200-377200	Weak transcription	Left Ventricle	heart
8	chr12:373200-378600	Weak transcription	Placenta	Placenta
9	chr12:373200-391200	Weak transcription	Lung	lung
10	chr12:373200-393600	Weak transcription	A549	lung
11	chr12:373200-401400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr12:373400-377000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr12:373600-387800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr12:373600-388200	Weak transcription	HSMM	muscle
15	chr12:373800-377200	Weak transcription	HSMMtube	muscle
16	chr12:373800-393000	Weak transcription	Thymus	Thymus
17	chr12:374200-389800	Weak transcription	Primary T helper cells PMA-I stimulated	--
18	chr12:375400-388000	Weak transcription	Primary T cells from cord blood	blood
19	chr12:376200-376800	Enhancers	Fetal Kidney	kidney
20	chr12:376200-377000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr12:376400-377400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr12:376400-377800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr12:376600-391000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr12:376800-377000	Enhancers	Brain Anterior Caudate	brain
25	chr12:376800-377200	Enhancers	Brain Hippocampus Middle	brain
26	chr12:376800-377200	Bivalent Enhancer	Fetal Lung	lung
27	chr12:376800-377400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr12:376800-378200	Enhancers	Brain Cingulate Gyrus	brain
29	chr12:376800-378800	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
30	chr12:376800-393800	Weak transcription	Fetal Kidney	kidney
31	chr12:377000-377200	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr12:377000-377200	Bivalent Enhancer	Stomach Mucosa	stomach
33	chr12:377000-377200	Bivalent Enhancer	NH-A	brain
34	chr12:377000-377200	Enhancers	Osteobl	bone
35	chr12:377000-377400	Flanking Active TSS	Brain Anterior Caudate	brain
36	chr12:377000-377400	Enhancers	Brain Germinal Matrix	brain
37	chr12:377000-377400	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
38	chr12:377000-377600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr12:377000-377600	Bivalent Enhancer	Fetal Brain Male	brain
40	chr12:377000-377800	Active TSS	Pancreatic Islets	Pancreatic Islet
41	chr12:377000-378000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr12:377000-378000	Enhancers	Brain Inferior Temporal Lobe	brain
43	chr12:377000-378000	Enhancers	Brain Substantia Nigra	brain
44	chr12:377000-378200	Enhancers	Brain Angular Gyrus	brain
45	chr12:377000-378200	Enhancers	Ovary	ovary
46	chr12:377000-378600	Enhancers	Fetal Heart	heart
47	chr12:377200-377400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr12:377200-377400	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr12:377200-377400	Enhancers	Adipose Nuclei	Adipose
50	chr12:377200-377400	Flanking Bivalent TSS/Enh	Fetal Lung	lung

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