Variant report

Variant	esv3503796
Chromosome Location	chr12:11190186-11291382
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:258)
CpG islands
(count:489)
Chromatin interactive
region (count:8)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:258 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:11224069-11224255	HepG2	liver:	n/a	n/a
2	ATF2	chr12:11238009-11238486	GM12878	blood:	n/a	n/a
3	ATF2	chr12:11237956-11238445	GM12878	blood:	n/a	n/a
4	BATF	chr12:11247547-11247827	GM12878	blood:	n/a	n/a
5	BATF	chr12:11228218-11228560	GM12878	blood:	n/a	n/a
6	BATF	chr12:11216721-11217010	GM12878	blood:	n/a	n/a
7	BATF	chr12:11238084-11238352	GM12878	blood:	n/a	n/a
8	BATF	chr12:11288756-11288960	GM12878	blood:	n/a	n/a
9	BATF	chr12:11263799-11264109	GM12878	blood:	n/a	n/a
10	BATF	chr12:11247482-11247799	GM12878	blood:	n/a	n/a
11	BATF	chr12:11238012-11238373	GM12878	blood:	n/a	n/a
12	BATF	chr12:11225254-11225547	GM12878	blood:	n/a	n/a
13	BATF	chr12:11288732-11288969	GM12878	blood:	n/a	n/a
14	BATF	chr12:11263857-11264113	GM12878	blood:	n/a	n/a
15	BCL11A	chr12:11238061-11238356	GM12878	blood:	n/a	chr12:11238263-11238272
16	BCL11A	chr12:11247500-11247829	GM12878	blood:	n/a	n/a
17	BCL11A	chr12:11228248-11228517	GM12878	blood:	n/a	n/a
18	BCL11A	chr12:11288728-11288993	GM12878	blood:	n/a	n/a
19	BCL11A	chr12:11263900-11264159	GM12878	blood:	n/a	n/a
20	BHLHE40	chr12:11228293-11228667	GM12878	blood:	n/a	n/a
21	CEBPB	chr12:11260954-11260970	HepG2	liver:	n/a	n/a
22	CEBPB	chr12:11226186-11226481	HepG2	liver:	n/a	n/a
23	CEBPB	chr12:11223987-11224332	HepG2	liver:	n/a	n/a
24	CEBPB	chr12:11222658-11222813	HepG2	liver:	n/a	n/a
25	CHD2	chr12:11238132-11238304	GM12878	blood:	n/a	n/a
26	CTCF	chr12:11209740-11209890	HepG2	liver:	n/a	n/a
27	CTCF	chr12:11282630-11282692	Fibrobl	skin:	n/a	n/a
28	CTCF	chr12:11270380-11270463	GM13977	blood:	n/a	n/a
29	CTCF	chr12:11209820-11209970	HEK293	kidney:	n/a	n/a
30	CTCF	chr12:11281909-11281930	Spleen_OC	spleen:	n/a	n/a
31	CTCF	chr12:11281056-11281182	Spleen_OC	spleen:	n/a	n/a
32	CTCF	chr12:11230498-11230623	Lung_OC	lung:	n/a	n/a
33	CTCF	chr12:11247641-11247704	GM20000	blood:	n/a	n/a
34	CTCF	chr12:11207523-11207552	GM10248	blood:	n/a	n/a
35	CTCF	chr12:11209872-11209908	H1-hESC	embryonic stem cell:	n/a	n/a
36	CTCF	chr12:11206452-11206523	Kidney_OC	kidney:	n/a	n/a
37	CTCF	chr12:11248748-11248798	Kidney_OC	kidney:	n/a	n/a
38	CTCF	chr12:11209880-11210030	GM12872	blood:	n/a	n/a
39	CTCF	chr12:11257042-11257094	GM20000	blood:	n/a	n/a
40	CTCF	chr12:11265530-11265560	GM13976	blood:	n/a	n/a
41	CTCF	chr12:11209700-11209850	MCF-7	breast:	n/a	n/a
42	CUX1	chr12:11238241-11238349	GM12878	blood:	n/a	n/a
43	E2F4	chr12:11278096-11278419	MCF10A-Er-Src	breast:	n/a	n/a
44	E2F4	chr12:11282076-11282276	MCF10A-Er-Src	breast:	n/a	n/a
45	E2F4	chr12:11205619-11205672	MCF10A-Er-Src	breast:	n/a	n/a
46	E2F4	chr12:11220752-11221188	MCF10A-Er-Src	breast:	n/a	n/a
47	EBF1	chr12:11226243-11226583	GM12878	blood:	n/a	chr12:11226441-11226451 chr12:11226441-11226450 chr12:11226439-11226452
48	ELF1	chr12:11261505-11261735	K562	blood:	n/a	n/a
49	ELK1	chr12:11201299-11201328	Hela-S3	cervix:	n/a	n/a
50	ELK1	chr12:11278900-11278906	GM12878	blood:	n/a	n/a

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:11244939-11244989	HL-60	blood:	n/a
2	chr12:11244939-11244989	HL-60	blood:	n/a
3	chr12:11287271-11287321	PANC-1	pancreas:	n/a
4	chr12:11287815-11287865	NHBE	bronchial:	n/a
5	chr12:11244899-11244949	Hela-S3	cervix:	n/a
6	chr12:11286360-11286410	HRCEpiC	kidney:	n/a
7	chr12:11287815-11287865	HRE	kidney:	n/a
8	chr12:11215083-11215133	PFSK-1	brain:	n/a
9	chr12:11286360-11286410	GM19239	blood:	n/a
10	chr12:11216351-11216401	LNCaP	prostate:	n/a
11	chr12:11287815-11287865	ovcar-3	ovarian:	n/a
12	chr12:11215083-11215133	NHBE	bronchial:	n/a
13	chr12:11244899-11244949	HUVEC	blood vessel:	n/a
14	chr12:11287271-11287321	HUVEC	blood vessel:	n/a
15	chr12:11244939-11244989	Caco-2	colon:	n/a
16	chr12:11215083-11215133	U87	brain:	n/a
17	chr12:11287344-11287394	HNPCEpiC	eye:	n/a
18	chr12:11287815-11287865	RPTEC	kidney:	n/a
19	chr12:11216351-11216401	H1-hESC	embryonic stem cell:	embryo
20	chr12:11286360-11286410	Jurkat	blood:	n/a
21	chr12:11244899-11244949	HEEpiC	esophagus:	n/a
22	chr12:11215083-11215133	AG09309	skin:	n/a
23	chr12:11244899-11244949	HMEC	breast:	n/a
24	chr12:11244939-11244989	NHDF-neo	bronchial:	n/a
25	chr12:11287815-11287865	IMR90	lung:	fetal
26	chr12:11215083-11215133	HCPEpiC	choroid plexus:	n/a
27	chr12:11287815-11287865	PANC-1	pancreas:	n/a
28	chr12:11286360-11286410	HCPEpiC	choroid plexus:	n/a
29	chr12:11244939-11244989	HCT-116	colon:	n/a
30	chr12:11286360-11286410	PANC-1	pancreas:	n/a
31	chr12:11215083-11215133	HPAEpiC	pulmonary alveolar:	n/a
32	chr12:11287344-11287394	AoSMC	blood vessel:	n/a
33	chr12:11244939-11244989	HEK293	kidney:	embryo
34	chr12:11244939-11244989	T-47D	breast:	n/a
35	chr12:11287815-11287865	HRCEpiC	kidney:	n/a
36	chr12:11216351-11216401	HMEC	breast:	n/a
37	chr12:11244939-11244989	AG04449	skin:	fetal
38	chr12:11216351-11216401	HCPEpiC	choroid plexus:	n/a
39	chr12:11287344-11287394	PFSK-1	brain:	n/a
40	chr12:11286360-11286410	AG04449	skin:	fetal
41	chr12:11216351-11216401	HNPCEpiC	eye:	n/a
42	chr12:11287271-11287321	GM12878	blood:	n/a
43	chr12:11287344-11287394	HL-60	blood:	n/a
44	chr12:11244939-11244989	Hepatocyte	liver:	n/a
45	chr12:11287344-11287394	U87	brain:	n/a
46	chr12:11286360-11286410	NH-A	brain:	n/a
47	chr12:11216351-11216401	SK-N-MC	brain:	n/a
48	chr12:11287271-11287321	NB4	blood:	n/a
49	chr12:11287271-11287321	AoSMC	blood vessel:	n/a
50	chr12:11244939-11244989	AG04450	lung:	fetal

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:11210669..11211248-chr5:109800405..109801099,2	MCF-7	breast:
2	chr12:11253040..11255708-chr12:11259363..11262255,2	K562	blood:
3	chr12:11271454..11274346-chr12:11279643..11282306,2	MCF-7	breast:
4	chr12:11271454..11274346-chr12:11279643..11282306,2	MCF-7	breast:
5	chr12:11237724..11239418-chr12:11252570..11254241,2	MCF-7	breast:
6	chr12:11237724..11239418-chr12:11252570..11254241,2	MCF-7	breast:
7	chr12:11253040..11255708-chr12:11259363..11262255,2	K562	blood:
8	chr12:11290678..11292304-chr12:11322742..11325522,2	MCF-7	breast:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRH1-1	chr12:11273609-11273779	NONHSAT026916
2	lnc-PRH1-1	chr12:11273435-11273779	NONHSAT026920
3	lnc-PRH1-1	chr12:11199612-11199787	NONHSAT026916
4	lnc-PRH1-1	chr12:11199619-11199787	NONHSAT026907
5	lnc-PRH1-1	chr12:11199619-11199713	NONHSAT026914
6	lnc-PRH1-1	chr12:11199619-11199787	NR_037918
7	lnc-PRH1-1	chr12:11199619-11199640	NONHSAT026908
8	lnc-TAS2R46-1	chr12:11200931-11201855	NONHSAT026917
9	lnc-TAS2R43-1	chr12:11229915-11230841	NONHSAT140056
10	lnc-PRH1-1	chr12:11199619-11199736	NONHSAT026915
11	lnc-PRH1-1	chr12:11199619-11199787	NONHSAT026912
12	lnc-TAS2R43-1	chr12:11229368-11231770	NONHSAT026918

No data

Variant related genes	Relation type
TAS2R46	TF binding region
ENSG00000256400	TF binding region
PRR4	TF binding region
TAS2R63P	TF binding region
TAS2R30	TF binding region
TAS2R43	TF binding region
TAS2R64P	TF binding region
TAS2R46	CpG island
ENSG00000256400	CpG island
PRR4	CpG island
TAS2R63P	CpG island
TAS2R30	CpG island
TAS2R43	CpG island
TAS2R64P	CpG island
ENSG00000212127	chromatin interactions
ENSG00000111215	chromatin interactions
ENSG00000256537	chromatin interactions
ENSG00000256712	chromatin interactions

Extended variants
information (count: 5445 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:5445 , 50 per page) page: 1 2 3 4 5 6 7 ... 109

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs551562179	chr12:11190227-11190228	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs192597413	chr12:11190231-11190232	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs571391662	chr12:11190244-11190245	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs535324557	chr12:11190283-11190284	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs375277150	chr12:11190302-11190303	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs377045680	chr12:11190324-11190325	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs527476484	chr12:11190325-11190326	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs72475493	chr12:11190327-11190328	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs555263848	chr12:11190332-11190333	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs72475494	chr12:11190333-11190334	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs567338078	chr12:11190343-11190344	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs79873803	chr12:11190356-11190357	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs78975659	chr12:11190359-11190360	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs369578444	chr12:11190367-11190368	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs373751165	chr12:11190377-11190378	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs372347584	chr12:11190390-11190391	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs376422179	chr12:11190398-11190399	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs370810155	chr12:11190399-11190400	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs571673726	chr12:11190410-11190411	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs569219847	chr12:11190417-11190418	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs142826116	chr12:11190423-11190424	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs34685383	chr12:11190432-11190433	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs200709048	chr12:11190466-11190467	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs201681419	chr12:11190469-11190470	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs142916449	chr12:11190473-11190474	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs35002798	chr12:11190474-11190475	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs370892131	chr12:11190485-11190486	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs374524973	chr12:11190493-11190494	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs578131240	chr12:11190498-11190499	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs368773499	chr12:11190501-11190502	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs534387616	chr12:11190511-11190512	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs117872967	chr12:11190514-11190515	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs185560561	chr12:11190551-11190552	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs74496168	chr12:11190553-11190554	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs371947751	chr12:11190578-11190579	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs375287903	chr12:11190583-11190584	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs367973612	chr12:11190596-11190597	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs372160736	chr12:11190597-11190598	Weak transcription Strong transcription Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs113640705	chr12:11190602-11190603	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs111390160	chr12:11190612-11190613	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs576496171	chr12:11190616-11190617	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs536945996	chr12:11190626-11190627	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs75495041	chr12:11190633-11190634	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs565162394	chr12:11190669-11190670	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs527524825	chr12:11190676-11190677	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs76601099	chr12:11190696-11190697	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs75851772	chr12:11190731-11190732	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs73051048	chr12:11190744-11190745	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs35253973	chr12:11190763-11190764	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
50	rs560669228	chr12:11190772-11190773	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Squamous cell cancer	19607727	CNVD
Prostate cancer	16573809	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Acute myeloid leukemia	17237825	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD
Acute myeloid leukemia	20729466	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1263 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11136600-11196400	Weak transcription	Primary T helper cells PMA-I stimulated	--
2	chr12:11137400-11203000	Weak transcription	Hela-S3	cervix
3	chr12:11166000-11192000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
4	chr12:11166200-11210000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
5	chr12:11166600-11199600	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr12:11167400-11201800	Weak transcription	Stomach Smooth Muscle	stomach
7	chr12:11168800-11201000	Weak transcription	Colon Smooth Muscle	Colon
8	chr12:11168800-11205800	Weak transcription	Osteobl	bone
9	chr12:11169400-11201600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr12:11169400-11219400	Weak transcription	HUVEC	blood vessel
11	chr12:11169800-11198800	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr12:11171000-11225600	Weak transcription	HSMMtube	muscle
13	chr12:11174400-11200800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr12:11174600-11192000	Weak transcription	Brain Angular Gyrus	brain
15	chr12:11175000-11204600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
16	chr12:11176400-11203000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr12:11176400-11211200	Weak transcription	Aorta	Aorta
18	chr12:11177000-11200200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr12:11178400-11201000	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr12:11178400-11201000	Weak transcription	Brain Anterior Caudate	brain
21	chr12:11178400-11203400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
22	chr12:11178600-11191400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr12:11178800-11197400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr12:11179000-11191400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr12:11179000-11195200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr12:11179000-11198200	Weak transcription	Placenta	Placenta
27	chr12:11179000-11201000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr12:11179000-11203400	Weak transcription	Duodenum Smooth Muscle	Duodenum
29	chr12:11179000-11223800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr12:11179200-11190800	Weak transcription	Fetal Lung	lung
31	chr12:11179200-11203200	Weak transcription	Fetal Muscle Trunk	muscle
32	chr12:11179400-11222000	Weak transcription	Fetal Kidney	kidney
33	chr12:11180200-11203200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
34	chr12:11180600-11191800	Weak transcription	Brain Hippocampus Middle	brain
35	chr12:11180600-11202600	Weak transcription	Cortex derived primary cultured neurospheres	brain
36	chr12:11181000-11190800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr12:11181000-11196200	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr12:11181000-11196800	Weak transcription	Adipose Nuclei	Adipose
39	chr12:11181000-11197000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr12:11181000-11197400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr12:11181000-11197400	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr12:11181000-11198800	Weak transcription	HepG2	liver
43	chr12:11181000-11199000	Weak transcription	Primary B cells from peripheral blood	blood
44	chr12:11181000-11201000	Weak transcription	Brain Cingulate Gyrus	brain
45	chr12:11181000-11201000	Weak transcription	Left Ventricle	heart
46	chr12:11181000-11201000	Weak transcription	Sigmoid Colon	Sigmoid Colon
47	chr12:11181000-11202800	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr12:11181000-11203400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr12:11181000-11217400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr12:11181000-11220000	Weak transcription	Gastric	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links