Variant report

Variant	esv3503818
Chromosome Location	chr12:11202420-11231544
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:106)
CpG islands
(count:122)
Chromatin interactive
region (count:1)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:106 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:11224069-11224255	HepG2	liver:	n/a	n/a
2	BATF	chr12:11228218-11228560	GM12878	blood:	n/a	n/a
3	BATF	chr12:11225254-11225547	GM12878	blood:	n/a	n/a
4	BATF	chr12:11216721-11217010	GM12878	blood:	n/a	n/a
5	BCL11A	chr12:11228248-11228517	GM12878	blood:	n/a	n/a
6	BHLHE40	chr12:11228293-11228667	GM12878	blood:	n/a	n/a
7	CEBPB	chr12:11222658-11222813	HepG2	liver:	n/a	n/a
8	CEBPB	chr12:11223987-11224332	HepG2	liver:	n/a	n/a
9	CEBPB	chr12:11226186-11226481	HepG2	liver:	n/a	n/a
10	CTCF	chr12:11207523-11207552	GM10248	blood:	n/a	n/a
11	CTCF	chr12:11230498-11230623	Lung_OC	lung:	n/a	n/a
12	CTCF	chr12:11209880-11210030	GM12872	blood:	n/a	n/a
13	CTCF	chr12:11209740-11209890	HepG2	liver:	n/a	n/a
14	CTCF	chr12:11209872-11209908	H1-hESC	embryonic stem cell:	n/a	n/a
15	CTCF	chr12:11209820-11209970	HEK293	kidney:	n/a	n/a
16	CTCF	chr12:11209700-11209850	MCF-7	breast:	n/a	n/a
17	CTCF	chr12:11206452-11206523	Kidney_OC	kidney:	n/a	n/a
18	E2F4	chr12:11220752-11221188	MCF10A-Er-Src	breast:	n/a	n/a
19	E2F4	chr12:11205619-11205672	MCF10A-Er-Src	breast:	n/a	n/a
20	EBF1	chr12:11226243-11226583	GM12878	blood:	n/a	chr12:11226441-11226451 chr12:11226441-11226450 chr12:11226439-11226452
21	EP300	chr12:11223962-11224277	HepG2	liver:	n/a	n/a
22	EP300	chr12:11228364-11228516	GM12878	blood:	n/a	n/a
23	FOXA1	chr12:11223802-11224380	HepG2	liver:	n/a	n/a
24	FOXA1	chr12:11223913-11224415	HepG2	liver:	n/a	n/a
25	FOXA1	chr12:11223974-11224466	HepG2	liver:	n/a	n/a
26	FOXA1	chr12:11223940-11224452	HepG2	liver:	n/a	n/a
27	FOXA2	chr12:11223617-11224724	HepG2	liver:	n/a	n/a
28	FOXA2	chr12:11223920-11224357	HepG2	liver:	n/a	n/a
29	FOXA2	chr12:11223986-11224245	A549	lung:	n/a	n/a
30	GATA3	chr12:11221936-11222225	MCF-7	breast:	n/a	n/a
31	HDAC2	chr12:11223990-11224345	HepG2	liver:	n/a	n/a
32	IRF1	chr12:11208646-11208659	K562	blood:	n/a	n/a
33	JUN	chr12:11209520-11209528	H1-hESC	embryonic stem cell:	n/a	n/a
34	JUN	chr12:11212501-11212751	HepG2	liver:	n/a	chr12:11212602-11212615
35	JUND	chr12:11224111-11224296	HepG2	liver:	n/a	n/a
36	JUND	chr12:11212422-11212743	HepG2	liver:	n/a	n/a
37	JUND	chr12:11202320-11202631	HepG2	liver:	n/a	chr12:11202474-11202483
38	JUND	chr12:11206169-11206422	HepG2	liver:	n/a	n/a
39	KAP1	chr12:11204620-11205519	K562	blood:	n/a	n/a
40	MAFF	chr12:11206268-11206470	HepG2	liver:	n/a	n/a
41	MAFK	chr12:11203223-11203352	HepG2	liver:	n/a	chr12:11203251-11203262 chr12:11203247-11203262 chr12:11203250-11203264 chr12:11203251-11203262 chr12:11203252-11203263 chr12:11203252-11203263
42	MAFK	chr12:11230418-11230581	HepG2	liver:	n/a	chr12:11230570-11230581 chr12:11230528-11230539 chr12:11230527-11230538 chr12:11230527-11230538 chr12:11230570-11230581
43	MAFK	chr12:11206179-11206474	HepG2	liver:	n/a	n/a
44	MAFK	chr12:11208768-11208866	HepG2	liver:	n/a	chr12:11208809-11208820 chr12:11208808-11208822 chr12:11208810-11208821 chr12:11208810-11208821 chr12:11208809-11208820
45	MAFK	chr12:11220562-11220586	HepG2	liver:	n/a	n/a
46	MAFK	chr12:11203144-11203399	HepG2	liver:	n/a	chr12:11203251-11203262 chr12:11203247-11203262 chr12:11203250-11203264 chr12:11203251-11203262 chr12:11203252-11203263 chr12:11203252-11203263
47	MAZ	chr12:11206868-11206964	HepG2	liver:	n/a	n/a
48	MYC	chr12:11226626-11226646	H1-hESC	embryonic stem cell:	n/a	n/a
49	NANOG	chr12:11224022-11224335	H1-hESC	embryonic stem cell:	n/a	n/a
50	NFIC	chr12:11228182-11228652	GM12878	blood:	n/a	chr12:11228325-11228341

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:11215083-11215133	HCPEpiC	choroid plexus:	n/a
2	chr12:11216351-11216401	AG10803	skin:	n/a
3	chr12:11216351-11216401	HAEpiC	amniotic membrane:	n/a
4	chr12:11215083-11215133	GM19239	blood:	n/a
5	chr12:11216351-11216401	HepG2	liver:	n/a
6	chr12:11215083-11215133	GM12891	blood:	n/a
7	chr12:11215083-11215133	HEK293	kidney:	embryo
8	chr12:11215083-11215133	MCF10A-Er-Src	breast:	n/a
9	chr12:11215083-11215133	PrEC	prostate:	n/a
10	chr12:11216351-11216401	HPAEpiC	pulmonary alveolar:	n/a
11	chr12:11216351-11216401	SK-N-SH	brain:	n/a
12	chr12:11216351-11216401	NH-A	brain:	n/a
13	chr12:11216351-11216401	HRE	kidney:	n/a
14	chr12:11215083-11215133	U87	brain:	n/a
15	chr12:11215083-11215133	SK-N-SH_RA	brain:	n/a
16	chr12:11216351-11216401	ovcar-3	ovarian:	n/a
17	chr12:11215083-11215133	A549	lung:	n/a
18	chr12:11216351-11216401	BE2_C	brain:	n/a
19	chr12:11216351-11216401	HRPEpiC	eye:	n/a
20	chr12:11216351-11216401	GM12891	blood:	n/a
21	chr12:11215083-11215133	AG04450	lung:	fetal
22	chr12:11215083-11215133	HRPEpiC	eye:	n/a
23	chr12:11215083-11215133	PANC-1	pancreas:	n/a
24	chr12:11215083-11215133	HCF	heart:	n/a
25	chr12:11216351-11216401	HCM	heart:	n/a
26	chr12:11215083-11215133	HEEpiC	esophagus:	n/a
27	chr12:11216351-11216401	SAEC	small airway:	n/a
28	chr12:11216351-11216401	PFSK-1	brain:	n/a
29	chr12:11215083-11215133	NH-A	brain:	n/a
30	chr12:11216351-11216401	HCT-116	colon:	n/a
31	chr12:11216351-11216401	GM06990	blood:	n/a
32	chr12:11215083-11215133	SK-N-MC	brain:	n/a
33	chr12:11216351-11216401	HNPCEpiC	eye:	n/a
34	chr12:11216351-11216401	RPTEC	kidney:	n/a
35	chr12:11215083-11215133	HepG2	liver:	n/a
36	chr12:11215083-11215133	Hela-S3	cervix:	n/a
37	chr12:11216351-11216401	HMEC	breast:	n/a
38	chr12:11215083-11215133	ProgFib	skin:	n/a
39	chr12:11215083-11215133	NB4	blood:	n/a
40	chr12:11216351-11216401	IMR90	lung:	fetal
41	chr12:11215083-11215133	AG09319	gingival:	n/a
42	chr12:11215083-11215133	HNPCEpiC	eye:	n/a
43	chr12:11216351-11216401	ProgFib	skin:	n/a
44	chr12:11215083-11215133	ECC-1	luminal epithelium:	n/a
45	chr12:11215083-11215133	AG04449	skin:	fetal
46	chr12:11216351-11216401	H1-hESC	embryonic stem cell:	embryo
47	chr12:11215083-11215133	HCT-116	colon:	n/a
48	chr12:11216351-11216401	T-47D	breast:	n/a
49	chr12:11215083-11215133	AoSMC	blood vessel:	n/a
50	chr12:11216351-11216401	Jurkat	blood:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:11210669..11211248-chr5:109800405..109801099,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TAS2R43-1	chr12:11229368-11231770	NONHSAT026918
2	lnc-TAS2R43-1	chr12:11229915-11230841	NONHSAT140056

No data

Variant related genes	Relation type
TAS2R46	TF binding region
PRR4	TF binding region
TAS2R63P	TF binding region
TAS2R64P	TF binding region
TAS2R46	CpG island
PRR4	CpG island
TAS2R63P	CpG island
TAS2R64P	CpG island

Extended variants
information (count: 1840 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:1840 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs547813160	chr12:11202421-11202422	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
2	rs73051092	chr12:11202425-11202426	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
3	rs73051093	chr12:11202441-11202442	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
4	rs546913747	chr12:11202454-11202455	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
5	rs61912887	chr12:11202462-11202463	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs76875116	chr12:11202481-11202482	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
7	rs184644301	chr12:11202513-11202514	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
8	rs548820791	chr12:11202515-11202516	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
9	rs2257110	chr12:11202522-11202523	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs537448955	chr12:11202539-11202540	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
11	rs568446339	chr12:11202568-11202569	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
12	rs570902689	chr12:11202576-11202577	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
13	rs539788975	chr12:11202577-11202578	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
14	rs199776885	chr12:11202598-11202599	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
15	rs111525211	chr12:11202631-11202632	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
16	rs533931993	chr12:11202634-11202635	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs368684094	chr12:11202647-11202648	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs371105914	chr12:11202687-11202688	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs573132768	chr12:11202711-11202712	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs536011662	chr12:11202718-11202719	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs146309522	chr12:11202719-11202720	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs189526070	chr12:11202740-11202741	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs553792147	chr12:11202774-11202775	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs544289570	chr12:11202826-11202827	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs138270861	chr12:11202852-11202853	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs142864282	chr12:11202865-11202866	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
27	rs540568609	chr12:11202876-11202877	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
28	rs560455886	chr12:11202913-11202914	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
29	rs191129402	chr12:11202934-11202935	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
30	rs370053966	chr12:11202958-11202959	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
31	rs542762631	chr12:11202989-11202990	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
32	rs71453410	chr12:11203030-11203031	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
33	rs570178271	chr12:11203050-11203051	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
34	rs531477246	chr12:11203052-11203053	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
35	rs2597988	chr12:11203065-11203066	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs556405247	chr12:11203098-11203099	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs368099536	chr12:11203104-11203105	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs527276609	chr12:11203116-11203117	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs74062429	chr12:11203191-11203192	Weak transcription ZNF genes & repeats Strong transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs575362755	chr12:11203238-11203239	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
41	rs146104635	chr12:11203281-11203282	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
42	rs75285008	chr12:11203282-11203283	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
43	rs77309086	chr12:11203288-11203289	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
44	rs113795634	chr12:11203322-11203323	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
45	rs184859114	chr12:11203338-11203339	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
46	rs72475502	chr12:11203340-11203341	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
47	rs555888684	chr12:11203346-11203347	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
48	rs201674259	chr12:11203364-11203365	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
49	rs569342266	chr12:11203365-11203366	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a
50	rs201892522	chr12:11203366-11203367	ZNF genes & repeats Weak transcription Strong transcription	TF binding region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Squamous cell cancer	19607727	CNVD
Prostate cancer	16573809	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Acute myeloid leukemia	17237825	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD
Acute myeloid leukemia	20729466	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:319 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11137400-11203000	Weak transcription	Hela-S3	cervix
2	chr12:11166200-11210000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr12:11168800-11205800	Weak transcription	Osteobl	bone
4	chr12:11169400-11219400	Weak transcription	HUVEC	blood vessel
5	chr12:11171000-11225600	Weak transcription	HSMMtube	muscle
6	chr12:11175000-11204600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr12:11176400-11203000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr12:11176400-11211200	Weak transcription	Aorta	Aorta
9	chr12:11178400-11203400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr12:11179000-11203400	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr12:11179000-11223800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr12:11179200-11203200	Weak transcription	Fetal Muscle Trunk	muscle
13	chr12:11179400-11222000	Weak transcription	Fetal Kidney	kidney
14	chr12:11180200-11203200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr12:11180600-11202600	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr12:11181000-11202800	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr12:11181000-11203400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr12:11181000-11217400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr12:11181000-11220000	Weak transcription	Gastric	stomach
20	chr12:11181000-11224800	Weak transcription	Fetal Stomach	stomach
21	chr12:11181200-11202600	Weak transcription	Fetal Intestine Small	intestine
22	chr12:11181200-11203000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr12:11181600-11209400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
24	chr12:11184200-11213000	Weak transcription	Thymus	Thymus
25	chr12:11186200-11203400	Weak transcription	Ovary	ovary
26	chr12:11192600-11203800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
27	chr12:11193200-11224200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr12:11194600-11210000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
29	chr12:11195800-11203400	Weak transcription	Fetal Brain Male	brain
30	chr12:11196200-11202800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr12:11196600-11202800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr12:11196600-11211400	Weak transcription	Fetal Heart	heart
33	chr12:11196600-11215000	Weak transcription	NHLF	lung
34	chr12:11197000-11202600	Weak transcription	Brain Germinal Matrix	brain
35	chr12:11197200-11202600	Weak transcription	Fetal Brain Female	brain
36	chr12:11197400-11203000	Weak transcription	GM12878-XiMat	blood
37	chr12:11197400-11203600	Weak transcription	Primary T helper cells PMA-I stimulated	--
38	chr12:11197600-11203000	Weak transcription	Pancreatic Islets	Pancreatic Islet
39	chr12:11197800-11203000	Weak transcription	Primary T helper cells fromperipheralblood	blood
40	chr12:11197800-11203200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr12:11198000-11230200	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr12:11198200-11205000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr12:11199200-11202800	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr12:11199200-11203000	Weak transcription	Small Intestine	intestine
45	chr12:11199600-11202600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
46	chr12:11199600-11202800	Weak transcription	Duodenum Mucosa	Duodenum
47	chr12:11199600-11203000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr12:11199600-11203200	Weak transcription	Primary T cells from cord blood	blood
49	chr12:11199600-11203600	Weak transcription	Liver	Liver
50	chr12:11199600-11214200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links