Variant report

Variant esv3507650
Chromosome Location chr3:88348625-88460502
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:88347800-88350000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr3:88348600-88350000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:88350000-88351000 Enhancers Rectal Mucosa Donor 31 rectum
4 chr3:88350000-88352000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr3:88351000-88358600 Weak transcription Right Atrium heart
6 chr3:88352200-88352800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
7 chr3:88355200-88360000 Enhancers HUES48 Cell Line embryonic stem cell
8 chr3:88355400-88357400 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr3:88355600-88357000 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr3:88355600-88359000 Enhancers iPS-18 Cell Line embryonic stem cell
11 chr3:88355600-88359800 Enhancers HUES6 Cell Line embryonic stem cell
12 chr3:88355800-88359400 Enhancers HUES64 Cell Line embryonic stem cell
13 chr3:88356000-88356200 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr3:88356000-88356200 Enhancers H1 Cell Line embryonic stem cell
15 chr3:88356200-88356800 Weak transcription H1 Cell Line embryonic stem cell
16 chr3:88356200-88358400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr3:88356800-88357000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr3:88356800-88357200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr3:88356800-88357200 Enhancers Brain Germinal Matrix brain
20 chr3:88356800-88357200 Bivalent Enhancer Fetal Muscle Trunk muscle
21 chr3:88356800-88357200 Enhancers Pancreas Pancrea
22 chr3:88356800-88357600 Enhancers H1 Cell Line embryonic stem cell
23 chr3:88357000-88357200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
24 chr3:88357000-88357400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
25 chr3:88357000-88357800 Enhancers H9 Cell Line embryonic stem cell
26 chr3:88357400-88358000 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr3:88357400-88358800 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr3:88358000-88359000 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr3:88358400-88359200 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr3:88359000-88361000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr3:88360800-88362200 Enhancers Fetal Lung lung
32 chr3:88361000-88361200 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr3:88361000-88361800 Enhancers Fetal Stomach stomach
34 chr3:88365000-88366000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr3:88370400-88371200 Enhancers Hela-S3 cervix
36 chr3:88370600-88370800 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr3:88370800-88371000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:88371000-88371200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:88371200-88371400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr3:88373800-88374800 Enhancers HepG2 liver
41 chr3:88374000-88374400 Enhancers HUES6 Cell Line embryonic stem cell
42 chr3:88374200-88374400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr3:88383600-88384000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr3:88399800-88400200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr3:88405600-88406000 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr3:88406200-88406600 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr3:88411200-88411800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr3:88411400-88412200 Enhancers Rectal Mucosa Donor 31 rectum
49 chr3:88411600-88411800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr3:88418000-88419200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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