Variant report

Variant	esv3509631
Chromosome Location	chr7:66101713-66137585
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1312)
CpG islands
(count:551)
Chromatin interactive
region (count:75)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:1312 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:66122346-66122452	K562	blood:	n/a	n/a
2	ARID3A	chr7:66119116-66119616	K562	blood:	n/a	n/a
3	ARID3A	chr7:66119183-66119719	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:66104611-66105223	K562	blood:	n/a	n/a
5	ATF1	chr7:66104717-66105151	K562	blood:	n/a	n/a
6	ATF1	chr7:66119167-66119664	K562	blood:	n/a	n/a
7	ATF2	chr7:66119716-66120068	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr7:66118840-66119779	GM12878	blood:	n/a	n/a
9	ATF2	chr7:66118932-66119634	GM12878	blood:	n/a	n/a
10	ATF2	chr7:66119169-66119662	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr7:66119162-66119631	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF3	chr7:66119105-66119640	A549	lung:	n/a	chr7:66119369-66119380 chr7:66119491-66119500 chr7:66119500-66119509
13	ATF3	chr7:66119127-66119687	K562	blood:	n/a	chr7:66119369-66119380 chr7:66119491-66119500 chr7:66119500-66119509
14	ATF3	chr7:66119168-66119702	A549	lung:	n/a	chr7:66119369-66119380 chr7:66119491-66119500 chr7:66119500-66119509
15	BACH1	chr7:66119044-66120214	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr7:66136663-66136908	GM12878	blood:	n/a	n/a
17	BCL3	chr7:66118929-66120075	A549	lung:	n/a	chr7:66119961-66119970 chr7:66119921-66119934 chr7:66119448-66119457 chr7:66119665-66119678
18	BCL3	chr7:66119260-66119740	GM12878	blood:	n/a	chr7:66119448-66119457 chr7:66119665-66119678
19	BCL3	chr7:66119035-66119833	A549	lung:	n/a	chr7:66119448-66119457 chr7:66119665-66119678
20	BCL3	chr7:66119135-66119682	GM12878	blood:	n/a	chr7:66119448-66119457 chr7:66119665-66119678
21	BCLAF1	chr7:66118954-66119662	GM12878	blood:	n/a	chr7:66119448-66119457
22	BCLAF1	chr7:66118933-66119785	GM12878	blood:	n/a	chr7:66119448-66119457 chr7:66119665-66119678
23	BHLHE40	chr7:66119077-66119999	K562	blood:	n/a	chr7:66119491-66119507 chr7:66119250-66119266
24	BHLHE40	chr7:66104677-66105571	K562	blood:	n/a	n/a
25	BHLHE40	chr7:66119049-66119955	GM12878	blood:	n/a	chr7:66119491-66119507 chr7:66119250-66119266
26	BHLHE40	chr7:66120241-66120374	K562	blood:	n/a	n/a
27	BHLHE40	chr7:66103210-66103286	HepG2	liver:	n/a	n/a
28	BHLHE40	chr7:66118327-66118594	K562	blood:	n/a	n/a
29	BRCA1	chr7:66119207-66119728	H1-hESC	embryonic stem cell:	n/a	n/a
30	BRCA1	chr7:66119935-66120048	HepG2	liver:	n/a	n/a
31	BRCA1	chr7:66119104-66119557	GM12878	blood:	n/a	n/a
32	BRCA1	chr7:66119085-66119705	HepG2	liver:	n/a	n/a
33	BRCA1	chr7:66108653-66108717	GM12878	blood:	n/a	n/a
34	BRCA1	chr7:66119118-66119652	Hela-S3	cervix:	n/a	n/a
35	BRCA1	chr7:66106227-66106309	Hela-S3	cervix:	n/a	n/a
36	CBX3	chr7:66118815-66120480	K562	blood:	n/a	n/a
37	CBX3	chr7:66104404-66105221	K562	blood:	n/a	n/a
38	CBX3	chr7:66127900-66128288	K562	blood:	n/a	n/a
39	CBX3	chr7:66118903-66119724	K562	blood:	n/a	n/a
40	CBX3	chr7:66104699-66105168	K562	blood:	n/a	n/a
41	CBX3	chr7:66120040-66120476	K562	blood:	n/a	n/a
42	CCNT2	chr7:66119053-66120118	K562	blood:	n/a	chr7:66119500-66119509
43	CCNT2	chr7:66104577-66105204	K562	blood:	n/a	n/a
44	CEBPB	chr7:66104805-66105084	K562	blood:	n/a	n/a
45	CEBPB	chr7:66133743-66133943	K562	blood:	n/a	n/a
46	CEBPB	chr7:66119195-66119676	K562	blood:	n/a	n/a
47	CEBPB	chr7:66118074-66118505	K562	blood:	n/a	n/a
48	CEBPB	chr7:66133756-66133932	HepG2	liver:	n/a	n/a
49	CEBPB	chr7:66119398-66119595	HepG2	liver:	n/a	n/a
50	CEBPB	chr7:66120042-66120401	Hela-S3	cervix:	n/a	n/a

(count:551 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:66120042-66120092	SAEC	small airway:	n/a
2	chr7:66119851-66119901	AG04449	skin:	fetal
3	chr7:66120042-66120092	SAEC	small airway:	n/a
4	chr7:66119851-66119901	AG04449	skin:	fetal
5	chr7:66119851-66119901	ProgFib	skin:	n/a
6	chr7:66119076-66119126	NT2-D1	testis:	n/a
7	chr7:66120042-66120092	PrEC	prostate:	n/a
8	chr7:66120042-66120092	HNPCEpiC	eye:	n/a
9	chr7:66121172-66121222	PFSK-1	brain:	n/a
10	chr7:66121172-66121222	HRPEpiC	eye:	n/a
11	chr7:66121172-66121222	HRCEpiC	kidney:	n/a
12	chr7:66105984-66106034	PFSK-1	brain:	n/a
13	chr7:66121172-66121222	ECC-1	luminal epithelium:	n/a
14	chr7:66119479-66119529	AG04450	lung:	fetal
15	chr7:66116545-66116595	HEK293	kidney:	embryo
16	chr7:66119851-66119901	Jurkat	blood:	n/a
17	chr7:66105984-66106034	GM12892	blood:	n/a
18	chr7:66116545-66116595	Jurkat	blood:	n/a
19	chr7:66116545-66116595	LNCaP	prostate:	n/a
20	chr7:66120042-66120092	HUVEC	blood vessel:	n/a
21	chr7:66119479-66119529	Hepatocyte	liver:	n/a
22	chr7:66116545-66116595	HCT-116	colon:	n/a
23	chr7:66120042-66120092	SK-N-SH	brain:	n/a
24	chr7:66120395-66120445	NB4	blood:	n/a
25	chr7:66105984-66106034	HIPEpiC	eye:	n/a
26	chr7:66120395-66120445	NT2-D1	testis:	n/a
27	chr7:66121172-66121222	NB4	blood:	n/a
28	chr7:66119076-66119126	GM12891	blood:	n/a
29	chr7:66105984-66106034	HNPCEpiC	eye:	n/a
30	chr7:66119851-66119901	HCPEpiC	choroid plexus:	n/a
31	chr7:66120042-66120092	HCF	heart:	n/a
32	chr7:66118400-66118450	AG09319	gingival:	n/a
33	chr7:66118400-66118450	AG04449	skin:	fetal
34	chr7:66119851-66119901	SK-N-MC	brain:	n/a
35	chr7:66105984-66106034	ECC-1	luminal epithelium:	n/a
36	chr7:66120395-66120445	K562	blood:	n/a
37	chr7:66119076-66119126	HCPEpiC	choroid plexus:	n/a
38	chr7:66119076-66119126	MCF10A-Er-Src	breast:	n/a
39	chr7:66119479-66119529	SK-N-MC	brain:	n/a
40	chr7:66118400-66118450	CMK	blood:	n/a
41	chr7:66119851-66119901	AG04450	lung:	fetal
42	chr7:66120042-66120092	HCPEpiC	choroid plexus:	n/a
43	chr7:66121172-66121222	AG09319	gingival:	n/a
44	chr7:66119479-66119529	IMR90	lung:	fetal
45	chr7:66119479-66119529	ECC-1	luminal epithelium:	n/a
46	chr7:66119076-66119126	Hepatocyte	liver:	n/a
47	chr7:66118400-66118450	Hela-S3	cervix:	n/a
48	chr7:66105984-66106034	ProgFib	skin:	n/a
49	chr7:66105984-66106034	MCF-7	breast:	n/a
50	chr7:66119076-66119126	T-47D	breast:	n/a

(count:75 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:66117974..66122051-chr7:66130047..66133734,5	K562	blood:
2	chr7:66119236..66121485-chr7:66204940..66206778,2	K562	blood:
3	chr7:66091921..66093533-chr7:66126836..66128952,2	K562	blood:
4	chr7:66091949..66098427-chr7:66102890..66108956,6	K562	blood:
5	chr7:66130351..66133208-chr7:66135142..66136772,2	K562	blood:
6	chr7:66119490..66121348-chr7:66145844..66148158,2	K562	blood:
7	chr7:66117717..66119604-chr7:66204829..66207389,2	K562	blood:
8	chr7:66055924..66057616-chr7:66118024..66120875,2	K562	blood:
9	chr7:66125049..66126880-chr7:66129177..66130739,2	K562	blood:
10	chr7:66119671..66121376-chr7:66145999..66148457,2	MCF-7	breast:
11	chr7:66133503..66137997-chr7:66139253..66143655,5	MCF-7	breast:
12	chr7:66102739..66106974-chr7:66106983..66113666,6	K562	blood:
13	chr7:66137517..66139901-chr7:66146060..66148754,2	K562	blood:
14	chr7:66119315..66119930-chr7:66205425..66206247,2	NB4	blood:
15	chr7:66117820..66120556-chr7:66129006..66130726,2	MCF-7	breast:
16	chr7:66093935..66096906-chr7:66098680..66103505,6	MCF-7	breast:
17	chr7:66117771..66119349-chr7:66203886..66206364,2	MCF-7	breast:
18	chr7:66118965..66120049-chr7:66146710..66147584,5	MCF-7	breast:
19	chr7:66057103..66058075-chr7:66118859..66119855,2	MCF-7	breast:
20	chr6:27100755..27103538-chr7:66129131..66132077,2	K562	blood:
21	chr20:62205090..62205853-chr7:66119345..66120093,2	Hela-S3	cervix:
22	chr7:66121223..66123141-chr7:66144196..66146928,3	MCF-7	breast:
23	chr15:65477549..65478089-chr7:66119158..66119930,2	NB4	blood:
24	chr2:10262501..10263375-chr7:66119471..66120046,2	Hela-S3	cervix:
25	chr14:50233938..50234677-chr7:66119528..66120183,2	Hela-S3	cervix:
26	chr7:66108448..66114561-chr7:66117849..66121082,8	MCF-7	breast:
27	chr7:66119683..66120356-chr7:66146838..66147583,2	Hela-S3	cervix:
28	chr7:66127237..66129875-chr7:66131480..66133745,3	K562	blood:
29	chr7:66091844..66094640-chr7:66118336..66122170,5	MCF-7	breast:
30	chr7:66119503..66123638-chr7:66124009..66126767,3	K562	blood:
31	chr7:66092456..66095854-chr7:66117562..66119715,4	MCF-7	breast:
32	chr7:66119464..66119965-chr7:66146773..66147348,2	MCF-7	breast:
33	chr7:66116638..66119241-chr7:66120094..66122874,2	K562	blood:
34	chr7:66092574..66099199-chr7:66101866..66108717,9	K562	blood:
35	chr7:66120659..66123648-chr7:66152144..66153650,2	K562	blood:
36	chr7:66125049..66126880-chr7:66129177..66130739,2	K562	blood:
37	chr7:66102739..66106974-chr7:66106983..66113666,6	K562	blood:
38	chr5:172260720..172261679-chr7:66119494..66120203,2	Hela-S3	cervix:
39	chr7:66130351..66133208-chr7:66135142..66136772,2	K562	blood:
40	chr7:66118854..66122954-chr7:66127904..66133734,8	K562	blood:
41	chr7:66118570..66121104-chr7:66386256..66388029,2	K562	blood:
42	chr7:66118152..66121117-chr7:66145225..66147766,4	MCF-7	breast:
43	chr7:66112224..66114650-chr7:66117842..66120552,3	K562	blood:
44	chr7:66118921..66119611-chr7:66204868..66205819,2	HCT-116	colon:
45	chr6:31619887..31620869-chr7:66119424..66120022,2	Hela-S3	cervix:
46	chr7:66116638..66119241-chr7:66120094..66122874,2	K562	blood:
47	chr7:66100884..66103090-chr7:66203638..66205871,2	MCF-7	breast:
48	chr11:65728585..65729440-chr7:66119233..66119914,2	Hela-S3	cervix:
49	chr7:66092282..66095042-chr7:66105235..66108100,2	MCF-7	breast:
50	chr7:66107277..66110029-chr7:66113989..66116084,2	MCF-7	breast:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RABGEF1-2	chr7:66119506-66119613	NR_110037
2	lnc-RABGEF1-2	chr7:66119538-66119613	ENSG00000226824.2
3	lnc-RABGEF1-2	chr7:66134217-66134589	NR_110037
4	lnc-RABGEF1-2	chr7:66134217-66134285	ENSG00000226824.2
5	lnc-RABGEF1-2	chr7:66133763-66133900	NONHSAT121218
6	lnc-RABGEF1-2	chr7:66134730-66134842	ENSG00000226824.2
7	lnc-RABGEF1-2	chr7:66133437-66133471	NONHSAT121218
8	lnc-RABGEF1-2	chr7:66133751-66133900	ENSG00000226824.2
9	lnc-RABGEF1-2	chr7:66119573-66119613	ENSG00000226824.2
10	lnc-RABGEF1-2	chr7:66132385-66132597	ENSG00000226824.2
11	lnc-RABGEF1-2	chr7:66131101-66131286	ENSG00000226824.2
12	lnc-RABGEF1-2	chr7:66130157-66130274	ENSG00000226824.2
13	lnc-RABGEF1-2	chr7:66133751-66133900	ENSG00000226824.2
14	lnc-RABGEF1-2	chr7:66119525-66119613	ENSG00000226824.2
15	lnc-RABGEF1-2	chr7:66132385-66132597	NR_110037
16	lnc-RABGEF1-2	chr7:66133751-66133900	NR_110037
17	lnc-RABGEF1-2	chr7:66134126-66134718	NONHSAT121218

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	KCTD7	hsa-miR-92a-3p	chr7:66106745-66106769

Variant related genes	Relation type
ENSG00000226824	TF binding region
ENSG00000226824	CpG island
ENSG00000104228	chromatin interactions
ENSG00000154710	chromatin interactions
ENSG00000120899	chromatin interactions
ENSG00000196787	chromatin interactions
ENSG00000101384	chromatin interactions
ENSG00000130589	chromatin interactions
ENSG00000171848	chromatin interactions
ENSG00000165516	chromatin interactions
ENSG00000113719	chromatin interactions
ENSG00000126522	chromatin interactions
ENSG00000204444	chromatin interactions
ENSG00000272831	chromatin interactions
ENSG00000145623	chromatin interactions
ENSG00000226824	chromatin interactions
ENSG00000166855	chromatin interactions
ENSG00000143933	chromatin interactions
ENSG00000106609	chromatin interactions
ENSG00000232559	chromatin interactions
ENSG00000249740	chromatin interactions
ENSG00000204463	chromatin interactions
ENSG00000243335	chromatin interactions
ENSG00000175467	chromatin interactions

Extended variants
information (count: 1499 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:1499 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs539366684	chr7:66101714-66101715	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs552525760	chr7:66101734-66101735	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs1610759	chr7:66101747-66101748	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs369171160	chr7:66101752-66101753	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs62469069	chr7:66101792-66101793	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs553692084	chr7:66101802-66101803	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs2901263	chr7:66101855-66101856	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs1796224	chr7:66101860-66101861	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs1796223	chr7:66101868-66101869	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs2420822	chr7:66101873-66101874	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs2159468	chr7:66101874-66101875	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs188287051	chr7:66101914-66101915	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs376963666	chr7:66101966-66101967	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs575341499	chr7:66101977-66101978	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs180804763	chr7:66101983-66101984	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs575711520	chr7:66101992-66101993	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs116435886	chr7:66102067-66102068	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs561539187	chr7:66102102-66102103	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs372159806	chr7:66102119-66102120	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs544430891	chr7:66102136-66102137	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs150835208	chr7:66102169-66102170	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs530268939	chr7:66102183-66102184	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs186440978	chr7:66102197-66102198	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs1638732	chr7:66102218-66102219	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs189259289	chr7:66102234-66102235	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs150016646	chr7:66102272-66102273	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs376780492	chr7:66102273-66102274	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs62469070	chr7:66102295-66102296	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs537950001	chr7:66102307-66102308	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs548039422	chr7:66102426-66102427	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs568238019	chr7:66102430-66102431	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs544511360	chr7:66102440-66102441	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs533795194	chr7:66102473-66102474	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs369044247	chr7:66102533-66102534	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs562528794	chr7:66102535-66102536	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs576763721	chr7:66102539-66102540	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs56904178	chr7:66102551-66102552	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs191980066	chr7:66102576-66102577	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs560802410	chr7:66102584-66102585	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs28671466	chr7:66102587-66102588	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs371872600	chr7:66102589-66102590	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs544681095	chr7:66102591-66102592	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs62469071	chr7:66102625-66102626	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs574953925	chr7:66102642-66102643	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs572025987	chr7:66102681-66102682	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs62469072	chr7:66102713-66102714	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs370642650	chr7:66102774-66102775	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs560727490	chr7:66102803-66102804	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs562795834	chr7:66102807-66102808	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs536884884	chr7:66102825-66102826	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Follicular lymphoma	20505157	CNVD
Biliary cancer	19435499	CNVD
Williams-beuren syndrome	22470819	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Astrocytoma	22246337	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
Salivary gland tumor	18059337	CNVD
Multiple myeloma	17550852	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Bladder cancer	21909424	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	17952125	CNVD
Prostate cancer	18632612	CNVD
Schizophrenia	21346763	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD
Myelofibrosis	22110671	CNVD
Lung cancer	21911935	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Neurodevelopmental disorder	22521361	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:1382 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66094400-66103200	Weak transcription	Small Intestine	intestine
2	chr7:66094800-66103400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:66095000-66102400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:66095000-66103000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr7:66095000-66103000	Weak transcription	Fetal Kidney	kidney
6	chr7:66095000-66103000	Weak transcription	Fetal Lung	lung
7	chr7:66095000-66103200	Weak transcription	Psoas Muscle	Psoas
8	chr7:66095000-66103400	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr7:66095000-66103400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr7:66095000-66103400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr7:66095000-66104200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr7:66095000-66108800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr7:66095000-66109000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr7:66095000-66115200	Weak transcription	HMEC	breast
15	chr7:66095200-66103000	Weak transcription	Stomach Mucosa	stomach
16	chr7:66095200-66103200	Weak transcription	Pancreatic Islets	Pancreatic Islet
17	chr7:66095200-66118400	Weak transcription	Fetal Heart	heart
18	chr7:66095200-66118400	Weak transcription	HUVEC	blood vessel
19	chr7:66095400-66103200	Weak transcription	Pancreas	Pancrea
20	chr7:66095800-66102800	Weak transcription	Fetal Brain Male	brain
21	chr7:66095800-66103200	Weak transcription	Esophagus	oesophagus
22	chr7:66096000-66113800	Strong transcription	Fetal Stomach	stomach
23	chr7:66097000-66113400	Strong transcription	Fetal Brain Female	brain
24	chr7:66097600-66103000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
25	chr7:66097600-66103000	Weak transcription	Dnd41	blood
26	chr7:66097800-66118200	Weak transcription	Primary hematopoietic stem cells	blood
27	chr7:66098000-66102600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr7:66098000-66109800	Strong transcription	Adipose Nuclei	Adipose
29	chr7:66098000-66111000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr7:66098000-66111400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr7:66098000-66112800	Strong transcription	Fetal Muscle Trunk	muscle
32	chr7:66098000-66113200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr7:66098000-66113400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
34	chr7:66098200-66111200	Strong transcription	HUES6 Cell Line	embryonic stem cell
35	chr7:66098200-66112400	Strong transcription	Fetal Muscle Leg	muscle
36	chr7:66098400-66103800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr7:66098400-66112200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr7:66098400-66113200	Strong transcription	Spleen	Spleen
39	chr7:66098600-66105800	Strong transcription	Liver	Liver
40	chr7:66098600-66109400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr7:66098800-66111200	Strong transcription	Primary T cells from cord blood	blood
42	chr7:66099000-66103000	Weak transcription	HepG2	liver
43	chr7:66099200-66102400	Genic enhancers	Fetal Intestine Small	intestine
44	chr7:66099400-66105200	Strong transcription	Primary T helper naive cells from peripheral blood	blood
45	chr7:66099400-66111200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr7:66099600-66102800	Weak transcription	Rectal Mucosa Donor 29	rectum
47	chr7:66099600-66103200	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr7:66099800-66102200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
49	chr7:66099800-66102800	Weak transcription	Right Ventricle	heart
50	chr7:66099800-66103200	Weak transcription	HUES48 Cell Line	embryonic stem cell

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