Variant report

Variant	esv3510143
Chromosome Location	chr11:101416267-101418689
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 103 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:103 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs76879966	chr11:101416284-101416285	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs12801413	chr11:101416306-101416307	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs12803724	chr11:101416418-101416419	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs562081730	chr11:101416426-101416427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs192177996	chr11:101416441-101416442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs79817589	chr11:101416446-101416447	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs79005670	chr11:101416449-101416450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs4492784	chr11:101416602-101416603	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs531757961	chr11:101416608-101416609	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs552471650	chr11:101416611-101416612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs184239915	chr11:101416683-101416684	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs61916054	chr11:101416716-101416717	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs537995893	chr11:101416726-101416727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs113059971	chr11:101416752-101416753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs372528114	chr11:101416785-101416786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs377202641	chr11:101416787-101416788	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs370333563	chr11:101416788-101416789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs113718464	chr11:101416811-101416812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs564663461	chr11:101416835-101416836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs527650068	chr11:101416842-101416843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs546936090	chr11:101416843-101416844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs188576496	chr11:101416866-101416867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs566723927	chr11:101416936-101416937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs12288109	chr11:101416966-101416967	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs538773437	chr11:101416970-101416971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs181698243	chr11:101417025-101417026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs576404377	chr11:101417063-101417064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs546094368	chr11:101417066-101417067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs556402312	chr11:101417082-101417083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs201109716	chr11:101417102-101417103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs12786241	chr11:101417122-101417123	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs576319138	chr11:101417124-101417125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs114744588	chr11:101417147-101417148	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs73575778	chr11:101417150-101417151	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs527818443	chr11:101417196-101417197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs569033655	chr11:101417205-101417206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs12807755	chr11:101417236-101417237	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs564493061	chr11:101417271-101417272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs533317910	chr11:101417274-101417275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs557821218	chr11:101417291-101417292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs552508649	chr11:101417331-101417332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs11224841	chr11:101417340-101417341	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs531628648	chr11:101417343-101417344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs548110471	chr11:101417386-101417387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs568214047	chr11:101417438-101417439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs533673684	chr11:101417449-101417450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs117844362	chr11:101417452-101417453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs570125663	chr11:101417455-101417456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs539752095	chr11:101417464-101417465	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs184472383	chr11:101417508-101417509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Melanoma	22183965	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Mantle cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal cancer	21851588	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101401200-101425800	Weak transcription	Ovary	ovary
2	chr11:101416400-101437400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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