Variant report

Variant	esv3514269
Chromosome Location	chr19:23983125-24280811
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3759)
CpG islands
(count:1711)
Chromatin interactive
region (count:123)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3759 , 50 per page) page: 1 2 3 4 5 6 7 ... 76

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:24183499-24185659	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:24237256-24237537	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:24246086-24246527	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:24277965-24278090	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:24269634-24269992	K562	blood:	n/a	n/a
6	ARID3A	chr19:24183498-24185658	K562	blood:	n/a	n/a
7	ARID3A	chr19:24216225-24216482	HepG2	liver:	n/a	n/a
8	ATF1	chr19:24246636-24246650	K562	blood:	n/a	n/a
9	ATF1	chr19:24097373-24097798	K562	blood:	n/a	n/a
10	ATF1	chr19:24006791-24007164	K562	blood:	n/a	n/a
11	ATF1	chr19:24183491-24185180	K562	blood:	n/a	n/a
12	ATF1	chr19:24269666-24270047	K562	blood:	n/a	n/a
13	ATF1	chr19:24082792-24082903	K562	blood:	n/a	n/a
14	ATF2	chr19:24244936-24245412	GM12878	blood:	n/a	n/a
15	ATF2	chr19:24244964-24245381	GM12878	blood:	n/a	n/a
16	ATF2	chr19:24269632-24269953	GM12878	blood:	n/a	n/a
17	ATF3	chr19:24184490-24185088	A549	lung:	n/a	n/a
18	ATF3	chr19:24184616-24185158	A549	lung:	n/a	n/a
19	ATF3	chr19:24183982-24184391	A549	lung:	n/a	n/a
20	ATF3	chr19:24184009-24184195	K562	blood:	n/a	n/a
21	ATF3	chr19:24184039-24184181	K562	blood:	n/a	n/a
22	ATF3	chr19:24183577-24183767	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF3	chr19:24183418-24183789	H1-hESC	embryonic stem cell:	n/a	n/a
24	ATF3	chr19:24183370-24183793	A549	lung:	n/a	n/a
25	ATF3	chr19:24097347-24097690	K562	blood:	n/a	n/a
26	ATF3	chr19:24184025-24184182	HepG2	liver:	n/a	n/a
27	BACH1	chr19:24216294-24216452	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr19:24000521-24000697	K562	blood:	n/a	n/a
29	BACH1	chr19:24184571-24185665	K562	blood:	n/a	n/a
30	BACH1	chr19:24183495-24184312	K562	blood:	n/a	n/a
31	BACH1	chr19:24270502-24270514	K562	blood:	n/a	n/a
32	BATF	chr19:24237342-24237641	GM12878	blood:	n/a	n/a
33	BATF	chr19:24245028-24245377	GM12878	blood:	n/a	n/a
34	BATF	chr19:24237294-24237770	GM12878	blood:	n/a	n/a
35	BATF	chr19:24253070-24253438	GM12878	blood:	n/a	chr19:24253275-24253286
36	BATF	chr19:24184007-24184218	GM12878	blood:	n/a	n/a
37	BATF	chr19:24184550-24184857	GM12878	blood:	n/a	n/a
38	BCL11A	chr19:24237418-24237685	GM12878	blood:	n/a	n/a
39	BCL11A	chr19:24183582-24183758	H1-hESC	embryonic stem cell:	n/a	n/a
40	BCL11A	chr19:24183982-24184247	GM12878	blood:	n/a	n/a
41	BCL11A	chr19:24183530-24183739	H1-hESC	embryonic stem cell:	n/a	n/a
42	BCL3	chr19:24256609-24257007	GM12878	blood:	n/a	n/a
43	BCL3	chr19:24183980-24184379	A549	lung:	n/a	n/a
44	BCL3	chr19:24184372-24184984	A549	lung:	n/a	n/a
45	BCL3	chr19:24269789-24270455	GM12878	blood:	n/a	n/a
46	BCL3	chr19:24269688-24270514	A549	lung:	n/a	n/a
47	BCL3	chr19:24183959-24184238	A549	lung:	n/a	n/a
48	BCL3	chr19:24269800-24270463	A549	lung:	n/a	n/a
49	BCL3	chr19:24239339-24239678	GM12878	blood:	n/a	n/a
50	BCL3	chr19:24183572-24183744	GM12878	blood:	n/a	n/a

(count:1711 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:24154607-24154657	SKMC	muscle:	n/a
2	chr19:24156884-24156934	RPTEC	kidney:	n/a
3	chr19:24216269-24216319	LNCaP	prostate:	n/a
4	chr19:24154607-24154657	SKMC	muscle:	n/a
5	chr19:24156884-24156934	RPTEC	kidney:	n/a
6	chr19:24216269-24216319	LNCaP	prostate:	n/a
7	chr19:24270468-24270518	Jurkat	blood:	n/a
8	chr19:24182718-24182768	NH-A	brain:	n/a
9	chr19:24154730-24154780	AG10803	skin:	n/a
10	chr19:24182688-24182738	SK-N-SH	brain:	n/a
11	chr19:24155489-24155539	AG04450	lung:	fetal
12	chr19:24154730-24154780	AG04449	skin:	fetal
13	chr19:24184660-24184710	GM06990	blood:	n/a
14	chr19:24184660-24184710	GM19239	blood:	n/a
15	chr19:24152294-24152344	HCT-116	colon:	n/a
16	chr19:24270073-24270123	AG04450	lung:	fetal
17	chr19:24216269-24216319	MCF-7	breast:	n/a
18	chr19:24182596-24182646	AG10803	skin:	n/a
19	chr19:24184660-24184710	A549	lung:	n/a
20	chr19:24216269-24216319	GM12891	blood:	n/a
21	chr19:24182837-24182887	BE2_C	brain:	n/a
22	chr19:24184660-24184710	AG09319	gingival:	n/a
23	chr19:24184851-24184901	BE2_C	brain:	n/a
24	chr19:24270007-24270057	RPTEC	kidney:	n/a
25	chr19:24182688-24182738	PFSK-1	brain:	n/a
26	chr19:24216269-24216319	PANC-1	pancreas:	n/a
27	chr19:24184753-24184803	HRPEpiC	eye:	n/a
28	chr19:24154730-24154780	IMR90	lung:	fetal
29	chr19:24184550-24184600	HMEC	breast:	n/a
30	chr19:24156884-24156934	AG04450	lung:	fetal
31	chr19:24184393-24184443	Hepatocyte	liver:	n/a
32	chr19:24154607-24154657	T-47D	breast:	n/a
33	chr19:24270468-24270518	NHDF-neo	bronchial:	n/a
34	chr19:24184660-24184710	ECC-1	luminal epithelium:	n/a
35	chr19:24269890-24269940	RPTEC	kidney:	n/a
36	chr19:24184933-24184983	GM06990	blood:	n/a
37	chr19:24182688-24182738	T-47D	breast:	n/a
38	chr19:24097753-24097803	BJ	skin:	n/a
39	chr19:24152294-24152344	RPTEC	kidney:	n/a
40	chr19:24269890-24269940	HL-60	blood:	n/a
41	chr19:24182718-24182768	HNPCEpiC	eye:	n/a
42	chr19:24184933-24184983	T-47D	breast:	n/a
43	chr19:24216269-24216319	HEEpiC	esophagus:	n/a
44	chr19:24270073-24270123	BE2_C	brain:	n/a
45	chr19:24184660-24184710	AoSMC	blood vessel:	n/a
46	chr19:24270007-24270057	AoSMC	blood vessel:	n/a
47	chr19:24269975-24270025	AG09309	skin:	n/a
48	chr19:24269968-24270018	BE2_C	brain:	n/a
49	chr19:24097753-24097803	U87	brain:	n/a
50	chr19:24182604-24182654	BJ	skin:	n/a

(count:123 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr19:24127186..24129970-chr19:24140101..24141968,2	K562	blood:
2	chr16:47538608..47539209-chr19:24184105..24184774,2	MCF-7	breast:
3	chr19:23990207..23992454-chr19:24002314..24004892,2	K562	blood:
4	chr11:85194574..85195759-chr19:24184744..24186176,10	MCF-7	breast:
5	chr19:24173529..24175347-chr19:24179956..24182069,2	MCF-7	breast:
6	chr19:24214690..24216513-chr19:24269521..24272423,2	K562	blood:
7	chr19:24183682..24186477-chr21:9825292..9827311,2	MCF-7	breast:
8	chr19:24000616..24002168-chr19:24002694..24005183,2	MCF-7	breast:
9	chr19:24190718..24193776-chr19:24211395..24214103,3	K562	blood:
10	chr19:24184300..24184982-chr6:133593600..133594102,2	MCF-7	breast:
11	chr19:24121908..24123986-chr19:24125230..24127009,2	MCF-7	breast:
12	chr19:23597097..23600084-chr19:24215418..24217838,2	MCF-7	breast:
13	chr19:24190718..24193776-chr19:24211395..24214103,3	K562	blood:
14	chr19:24216051..24217841-chr19:24269020..24271219,2	MCF-7	breast:
15	chr19:24173529..24175347-chr19:24179956..24182069,2	MCF-7	breast:
16	chr16:47538731..47540646-chr19:24183961..24186504,3	K562	blood:
17	chr19:24269905..24270406-chr19:47616316..47616816,2	Hela-S3	cervix:
18	chr19:24208713..24212092-chr19:24216129..24218537,3	K562	blood:
19	chr19:24184131..24186954-chr5:71145411..71148367,2	K562	blood:
20	chr19:24097916..24099582-chr19:24104881..24106475,2	K562	blood:
21	chr11:85193664..85196579-chr19:24184471..24186975,3	MCF-7	breast:
22	chr19:24266915..24268889-chr19:24271542..24273329,2	MCF-7	breast:
23	chr19:24098019..24099596-chr19:24100994..24103194,2	K562	blood:
24	chr19:23456603..23457127-chr19:24215859..24216611,4	MCF-7	breast:
25	chr19:24183455..24185005-chr21:9825897..9828322,2	K562	blood:
26	chr19:24183976..24186954-chr5:71145411..71148382,3	K562	blood:
27	chr19:24183629..24184220-chr2:230045099..230046085,2	MCF-7	breast:
28	chr19:24264646..24268309-chr19:24268403..24270705,3	MCF-7	breast:
29	chr19:24193099..24195417-chr19:24269900..24272452,2	K562	blood:
30	chr19:24183126..24185198-chr5:71145386..71148247,2	MCF-7	breast:
31	chr19:24184128..24185106-chr2:133038164..133039151,2	MCF-7	breast:
32	chr19:23598051..23598951-chr19:24216258..24216783,2	NB4	blood:
33	chr19:24183615..24184637-chr4:70296138..70296644,3	K562	blood:
34	chr19:24046219..24048369-chr19:24050993..24053040,2	MCF-7	breast:
35	chr17:33477724..33478250-chr19:24185482..24186473,2	HCT-116	colon:
36	chr19:24269806..24272597-chr19:24274053..24277432,4	K562	blood:
37	chr19:24184476..24185016-chr6:133593470..133593971,2	MCF-7	breast:
38	chr16:33963729..33966726-chr19:24184116..24187308,5	K562	blood:
39	chr19:24097706..24100500-chr19:24267529..24270344,3	K562	blood:
40	chr19:24121908..24123986-chr19:24125230..24127009,2	MCF-7	breast:
41	chr19:24179938..24183018-chr19:24183132..24186058,3	K562	blood:
42	chr19:24095542..24098509-chr19:24107269..24108889,2	K562	blood:
43	chr19:24214690..24216513-chr19:24269521..24272423,2	K562	blood:
44	chr19:24182607..24185200-chr5:71145273..71148251,3	MCF-7	breast:
45	chr11:85194679..85195667-chr19:24185002..24186153,3	MCF-7	breast:
46	chr19:24217068..24219436-chr19:24220648..24223132,2	K562	blood:
47	chr19:24183492..24185607-chr21:9824150..9825768,2	K562	blood:
48	chr11:85195169..85196687-chr19:24184953..24186982,2	MCF-7	breast:
49	chr17:33477647..33478335-chr19:24185255..24186286,3	MCF-7	breast:
50	chr16:47538624..47539255-chr19:24184251..24185320,3	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPSAP58-2	chr19:24014399-24014998	NONHSAT063934
2	lnc-ZNF254-1	chr19:24240733-24240767	NONHSAT063955
3	lnc-RPSAP58-3	chr19:24051557-24054170	NONHSAT063941
4	lnc-ZNF681-2	chr19:24140533-24140732	ENSG00000104777
5	lnc-RPSAP58-4	chr19:24110590-24112089	ENSG00000269397.1
6	lnc-RPSAP58-3	chr19:24047842-24047979	NONHSAT063941
7	lnc-ZNF681-2	chr19:24101883-24103000	ENSG00000104777
8	lnc-ZNF254-1	chr19:24232253-24232641	NONHSAT063955
9	lnc-RPSAP58-2	chr19:23990628-23990741	NONHSAT063935
10	lnc-ZNF681-4	chr19:24231737-24231816	NONHSAT063954
11	lnc-ZNF726-2	chr19:24218834-24223805	NONHSAT063953
12	lnc-ZNF681-4	chr19:24240392-24241030	NONHSAT063954
13	lnc-ZNF681-4	chr19:24232042-24232758	NONHSAT063954
14	lnc-ZNF681-2	chr19:24140533-24141028	NONHSAT063949
15	lnc-RPSAP58-2	chr19:23991521-23992317	NONHSAT063935
16	lnc-RPSAP58-2	chr19:23990628-23990741	NONHSAT063933
17	lnc-ZNF681-4	chr19:24245777-24246420	NONHSAT063954
18	lnc-ZNF681-4	chr19:24231276-24231697	NONHSAT063954
19	lnc-ZNF681-4	chr19:24242644-24243263	NONHSAT063954
20	lnc-RPSAP58-3	chr19:24051517-24052736	NONHSAT063942
21	lnc-RPSAP58-3	chr19:24053508-24054170	NONHSAT063942
22	lnc-RPSAP58-2	chr19:24014399-24014998	NONHSAT063933
23	lnc-ZNF254-2	chr19:24118022-24118975	NONHSAT063946
24	lnc-ZNF681-2	chr19:24134950-24135238	NONHSAT063949
25	lnc-RPSAP58-2	chr19:23991521-23991616	NONHSAT063933
26	lnc-ZNF681-2	chr19:24134972-24135238	ENSG00000104777

No data

Variant related genes	Relation type
ENSG00000269662	TF binding region
ZNF726	TF binding region
ENSG00000269397	TF binding region
ENSG00000267924	TF binding region
ZNF92P3	TF binding region
ZNF254	TF binding region
RNA5-8SP4	TF binding region
ENSG00000268362	TF binding region
RPSAP58	TF binding region
ENSG00000269289	TF binding region
ENSG00000269662	CpG island
ZNF726	CpG island
ENSG00000269397	CpG island
ENSG00000267924	CpG island
ZNF92P3	CpG island
ZNF254	CpG island
RNA5-8SP4	CpG island
ENSG00000268362	CpG island
RPSAP58	CpG island
ENSG00000269289	CpG island
ENSG00000269416	chromatin interactions
ENSG00000142230	chromatin interactions
ENSG00000200434	chromatin interactions
ENSG00000133872	chromatin interactions
ENSG00000183850	chromatin interactions
ENSG00000268362	chromatin interactions
ENSG00000269289	chromatin interactions
ENSG00000221288	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000213096	chromatin interactions
ENSG00000213967	chromatin interactions
ENSG00000213971	chromatin interactions
ENSG00000239776	chromatin interactions
ENSG00000222268	chromatin interactions
ENSG00000202174	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000268058	chromatin interactions
ENSG00000269421	chromatin interactions
ENSG00000272256	chromatin interactions
PGRMC1	miRNA target sites
RALB	miRNA target sites

Extended variants
information (count: 12218 )
Associated
traits (count: 48 )

Variant overlapped rSNPs/rCNVs (count:12218 , 50 per page) page: 1 2 3 4 5 6 7 ... 245

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6511561	chr19:23983126-23983127	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs182666651	chr19:23983140-23983141	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs6511562	chr19:23983191-23983192	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs577898432	chr19:23983216-23983217	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs545253361	chr19:23983270-23983271	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs187702524	chr19:23983296-23983297	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs6511563	chr19:23983297-23983298	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs140881969	chr19:23983317-23983318	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs191837960	chr19:23983328-23983329	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs528112837	chr19:23983344-23983345	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs547255722	chr19:23983368-23983369	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs117402204	chr19:23983397-23983398	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs538968315	chr19:23983400-23983401	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs140687121	chr19:23983418-23983419	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs200482088	chr19:23983419-23983420	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs55764357	chr19:23983429-23983430	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs550726790	chr19:23983439-23983440	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs183973084	chr19:23983440-23983441	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs536703844	chr19:23983480-23983481	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs558737037	chr19:23983488-23983489	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs374138962	chr19:23983540-23983541	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs554812555	chr19:23983561-23983562	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs144845965	chr19:23983567-23983568	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs187467917	chr19:23983632-23983633	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs533974530	chr19:23983659-23983660	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs553212533	chr19:23983669-23983670	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs4293508	chr19:23983675-23983676	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs534418759	chr19:23983676-23983677	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs545339828	chr19:23983692-23983693	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs557155162	chr19:23983748-23983749	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs372198321	chr19:23983765-23983766	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs141867508	chr19:23983774-23983775	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs542695315	chr19:23983808-23983809	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs560852034	chr19:23983811-23983812	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs528065408	chr19:23983838-23983839	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs112875620	chr19:23983851-23983852	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs564553427	chr19:23983873-23983874	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs144892442	chr19:23983891-23983892	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs532625566	chr19:23983966-23983967	Weak transcription ZNF genes & repeats Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs71167707	chr19:23984054-23984055	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs66636004	chr19:23984057-23984058	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs71167708	chr19:23984083-23984084	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs7508015	chr19:23984110-23984111	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs200796081	chr19:23984137-23984138	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs397938953	chr19:23984138-23984139	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs530272643	chr19:23984199-23984200	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs548649706	chr19:23984241-23984242	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs143071180	chr19:23984249-23984250	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs192022376	chr19:23984279-23984280	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs534325519	chr19:23984292-23984293	Weak transcription Enhancers ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:48)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Renal cell carcinoma	18194544	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Autism	19287141	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD

Chromatin state (count:3952 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:23965600-24000400	Weak transcription	Pancreas	Pancrea
2	chr19:23972400-23990000	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr19:23972600-23989800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr19:23972800-23998800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr19:23973800-23990200	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr19:23973800-23993400	Weak transcription	Aorta	Aorta
7	chr19:23973800-24000400	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr19:23973800-24001200	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr19:23974200-23984000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr19:23974200-23987400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr19:23977000-23998000	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr19:23978800-23984800	Weak transcription	Fetal Lung	lung
13	chr19:23980000-24000600	Weak transcription	K562	blood
14	chr19:23980200-23983800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr19:23980200-23994800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr19:23980400-23985600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr19:23982000-23983400	Enhancers	Primary hematopoietic stem cells	blood
18	chr19:23982000-23983400	Active TSS	Primary T regulatory cells fromperipheralblood	blood
19	chr19:23982000-23983800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
20	chr19:23982000-23985400	Enhancers	Primary B cells from peripheral blood	blood
21	chr19:23982000-23985600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr19:23982000-23997000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr19:23982200-23983400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
24	chr19:23982200-24004400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr19:23982400-23983800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
26	chr19:23982600-23983200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
27	chr19:23982600-23984200	Enhancers	Fetal Thymus	thymus
28	chr19:23982600-23984800	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr19:23982800-23983400	Weak transcription	Thymus	Thymus
30	chr19:23982800-23983600	Weak transcription	Fetal Heart	heart
31	chr19:23982800-23983800	Weak transcription	HUES6 Cell Line	embryonic stem cell
32	chr19:23982800-23984400	Enhancers	Primary B cells from cord blood	blood
33	chr19:23982800-23984400	Enhancers	Primary T cells from cord blood	blood
34	chr19:23982800-23984600	Enhancers	Primary T cells fromperipheralblood	blood
35	chr19:23982800-23984800	Enhancers	Primary T helper naive cells from peripheral blood	blood
36	chr19:23982800-23984800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
37	chr19:23982800-23984800	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr19:23982800-23984800	Enhancers	Primary T helper cells fromperipheralblood	blood
39	chr19:23982800-23984800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
40	chr19:23982800-23985000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
41	chr19:23982800-23987400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr19:23982800-23993000	Weak transcription	Dnd41	blood
43	chr19:23983000-23983400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr19:23983000-23984400	Enhancers	Primary T killer memory cells from peripheral blood	blood
45	chr19:23983000-23984600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr19:23983200-23984400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
47	chr19:23983400-23983600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
48	chr19:23983400-23984400	Enhancers	Thymus	Thymus
49	chr19:23983400-23984600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
50	chr19:23983400-23984800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood

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