Variant report

Variant	esv3518033
Chromosome Location	chr19:21278465-21747567
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4548)
CpG islands
(count:4886)
Chromatin interactive
region (count:75)
LncRNA
region (count:128)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:4548 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:21309568-21309872	K562	blood:	n/a	n/a
2	ARID3A	chr19:21688183-21688449	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:21317764-21318041	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:21324511-21325033	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:21380495-21380772	K562	blood:	n/a	n/a
6	ARID3A	chr19:21392842-21393238	HepG2	liver:	n/a	n/a
7	ARID3A	chr19:21334536-21334657	HepG2	liver:	n/a	n/a
8	ARID3A	chr19:21541510-21541771	HepG2	liver:	n/a	n/a
9	ARID3A	chr19:21511352-21511789	K562	blood:	n/a	n/a
10	ARID3A	chr19:21640718-21641255	K562	blood:	n/a	n/a
11	ARID3A	chr19:21643535-21643787	K562	blood:	n/a	n/a
12	ARID3A	chr19:21505863-21506155	K562	blood:	n/a	n/a
13	ARID3A	chr19:21326481-21326923	K562	blood:	n/a	n/a
14	ARID3A	chr19:21385779-21386015	K562	blood:	n/a	n/a
15	ARID3A	chr19:21298266-21298592	K562	blood:	n/a	n/a
16	ARID3A	chr19:21688150-21688402	K562	blood:	n/a	n/a
17	ARID3A	chr19:21324594-21324991	K562	blood:	n/a	n/a
18	ARID3A	chr19:21511981-21512446	HepG2	liver:	n/a	n/a
19	ARID3A	chr19:21311642-21311836	K562	blood:	n/a	n/a
20	ARID3A	chr19:21689384-21689643	HepG2	liver:	n/a	n/a
21	ARID3A	chr19:21665809-21666009	K562	blood:	n/a	n/a
22	ARID3A	chr19:21310732-21311042	K562	blood:	n/a	n/a
23	ARID3A	chr19:21645154-21645383	K562	blood:	n/a	n/a
24	ARID3A	chr19:21320974-21321431	HepG2	liver:	n/a	n/a
25	ATF1	chr19:21380399-21380892	K562	blood:	n/a	n/a
26	ATF1	chr19:21579646-21580081	K562	blood:	n/a	n/a
27	ATF1	chr19:21311655-21311901	K562	blood:	n/a	n/a
28	ATF1	chr19:21512075-21512439	K562	blood:	n/a	n/a
29	ATF1	chr19:21309871-21310055	K562	blood:	n/a	n/a
30	ATF1	chr19:21640599-21641215	K562	blood:	n/a	n/a
31	ATF1	chr19:21688140-21688844	K562	blood:	n/a	n/a
32	ATF1	chr19:21676045-21676231	K562	blood:	n/a	n/a
33	ATF1	chr19:21646705-21647025	K562	blood:	n/a	n/a
34	ATF1	chr19:21324532-21324958	K562	blood:	n/a	n/a
35	ATF1	chr19:21516826-21516854	K562	blood:	n/a	n/a
36	ATF1	chr19:21323783-21324152	K562	blood:	n/a	n/a
37	ATF2	chr19:21688277-21688624	H1-hESC	embryonic stem cell:	n/a	n/a
38	ATF2	chr19:21579789-21580107	GM12878	blood:	n/a	n/a
39	ATF2	chr19:21405239-21405611	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr19:21512025-21512405	GM12878	blood:	n/a	n/a
41	ATF3	chr19:21380345-21380653	K562	blood:	n/a	n/a
42	ATF3	chr19:21640597-21640905	K562	blood:	n/a	n/a
43	ATF3	chr19:21643486-21643778	K562	blood:	n/a	n/a
44	ATF3	chr19:21640913-21641295	K562	blood:	n/a	n/a
45	ATF3	chr19:21640984-21641150	K562	blood:	n/a	n/a
46	BACH1	chr19:21377763-21378071	H1-hESC	embryonic stem cell:	n/a	n/a
47	BACH1	chr19:21688505-21688907	H1-hESC	embryonic stem cell:	n/a	n/a
48	BACH1	chr19:21665696-21666180	K562	blood:	n/a	n/a
49	BACH1	chr19:21511633-21511637	K562	blood:	n/a	n/a
50	BACH1	chr19:21334389-21334437	K562	blood:	n/a	n/a

(count:4886 , 50 per page) page: 1 2 3 4 5 6 7 ... 98

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:21657926-21657976	HepG2	liver:	n/a
2	chr19:21540538-21540588	GM19239	blood:	n/a
3	chr19:21324796-21324846	IMR90	lung:	fetal
4	chr19:21512166-21512216	HNPCEpiC	eye:	n/a
5	chr19:21512127-21512177	PFSK-1	brain:	n/a
6	chr19:21688263-21688313	HIPEpiC	eye:	n/a
7	chr19:21657926-21657976	HepG2	liver:	n/a
8	chr19:21540538-21540588	GM19239	blood:	n/a
9	chr19:21324796-21324846	IMR90	lung:	fetal
10	chr19:21512166-21512216	HNPCEpiC	eye:	n/a
11	chr19:21512127-21512177	PFSK-1	brain:	n/a
12	chr19:21688263-21688313	HIPEpiC	eye:	n/a
13	chr19:21646605-21646655	GM19239	blood:	n/a
14	chr19:21541917-21541967	Jurkat	blood:	n/a
15	chr19:21688828-21688878	AoSMC	blood vessel:	n/a
16	chr19:21324444-21324494	Caco-2	colon:	n/a
17	chr19:21688647-21688697	H1-hESC	embryonic stem cell:	embryo
18	chr19:21658645-21658695	ovcar-3	ovarian:	n/a
19	chr19:21540536-21540586	GM12892	blood:	n/a
20	chr19:21579911-21579961	MCF-7	breast:	n/a
21	chr19:21512258-21512308	AG10803	skin:	n/a
22	chr19:21512127-21512177	GM19239	blood:	n/a
23	chr19:21666788-21666838	HEK293	kidney:	embryo
24	chr19:21324130-21324180	Hepatocyte	liver:	n/a
25	chr19:21540946-21540996	NHDF-neo	bronchial:	n/a
26	chr19:21688905-21688955	HIPEpiC	eye:	n/a
27	chr19:21688397-21688447	HAEpiC	amniotic membrane:	n/a
28	chr19:21646470-21646520	HUVEC	blood vessel:	n/a
29	chr19:21512166-21512216	NHBE	bronchial:	n/a
30	chr19:21688755-21688805	Jurkat	blood:	n/a
31	chr19:21541699-21541749	H1-hESC	embryonic stem cell:	embryo
32	chr19:21324130-21324180	LNCaP	prostate:	n/a
33	chr19:21608124-21608174	HUVEC	blood vessel:	n/a
34	chr19:21687300-21687350	HRPEpiC	eye:	n/a
35	chr19:21688755-21688805	BE2_C	brain:	n/a
36	chr19:21579911-21579961	T-47D	breast:	n/a
37	chr19:21688739-21688789	NHDF-neo	bronchial:	n/a
38	chr19:21513138-21513188	IMR90	lung:	fetal
39	chr19:21591496-21591546	GM06990	blood:	n/a
40	chr19:21688739-21688789	Hepatocyte	liver:	n/a
41	chr19:21541358-21541408	A549	lung:	n/a
42	chr19:21687792-21687842	GM12878	blood:	n/a
43	chr19:21579877-21579927	HCT-116	colon:	n/a
44	chr19:21540946-21540996	SAEC	small airway:	n/a
45	chr19:21657650-21657700	H1-hESC	embryonic stem cell:	embryo
46	chr19:21324707-21324757	ProgFib	skin:	n/a
47	chr19:21513650-21513700	SK-N-SH	brain:	n/a
48	chr19:21687300-21687350	Hepatocyte	liver:	n/a
49	chr19:21579787-21579837	SK-N-SH	brain:	n/a
50	chr19:21512127-21512177	H1-hESC	embryonic stem cell:	embryo

(count:75 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr19:21324608..21326238-chr19:21328530..21331210,2	MCF-7	breast:
2	chr19:21329795..21332186-chr19:21344748..21346568,2	K562	blood:
3	chr19:21596819..21599115-chr19:21600673..21603133,2	MCF-7	breast:
4	chr19:21500655..21502261-chr19:21504561..21506244,2	K562	blood:
5	chr14:39639460..39640068-chr19:21325033..21325860,2	Hela-S3	cervix:
6	chr19:21462003..21463957-chr19:21465037..21467413,2	MCF-7	breast:
7	chr19:21581402..21583289-chr19:21587139..21589283,2	K562	blood:
8	chr19:21578989..21580670-chr19:21582551..21584236,2	K562	blood:
9	chr19:21665376..21665988-chr8:46940890..46941394,3	MCF-7	breast:
10	chr19:21509704..21512429-chr19:21517111..21519937,3	K562	blood:
11	chr19:21268071..21270842-chr19:21283139..21285114,2	K562	blood:
12	chr19:21552085..21554128-chr19:21570405..21572893,2	K562	blood:
13	chr19:21628308..21630512-chr19:21641046..21643091,2	K562	blood:
14	chr19:21578623..21581183-chr19:21590706..21592354,2	MCF-7	breast:
15	chr19:21573567..21575254-chr19:21579047..21580611,2	K562	blood:
16	chr19:21687245..21689707-chr19:21740240..21743085,2	MCF-7	breast:
17	chr19:21691065..21693260-chr19:21696883..21699244,2	MCF-7	breast:
18	chr19:21504637..21507576-chr19:21510636..21512879,2	MCF-7	breast:
19	chr19:21687904..21690838-chr19:21705351..21707923,2	K562	blood:
20	chr19:21617556..21619117-chr19:21620797..21622887,2	MCF-7	breast:
21	chr19:21665377..21666059-chr20:61799030..61799530,2	MCF-7	breast:
22	chr19:21503005..21505616-chr19:21507489..21509547,2	K562	blood:
23	chr19:21596819..21599115-chr19:21600673..21603133,2	MCF-7	breast:
24	chr19:21665377..21666008-chr8:46940755..46941391,3	MCF-7	breast:
25	chr19:21276747..21278755-chr19:21280292..21281905,2	K562	blood:
26	chr19:21392274..21393855-chr19:21395475..21398127,2	K562	blood:
27	chr19:21520831..21523621-chr19:21524615..21527542,2	K562	blood:
28	chr19:21520831..21523621-chr19:21524615..21527542,2	K562	blood:
29	chr19:21619589..21622487-chr19:21622888..21624863,2	K562	blood:
30	chr19:21257717..21259573-chr19:21372943..21374798,2	K562	blood:
31	chr19:21511256..21513599-chr19:21513725..21515814,2	MCF-7	breast:
32	chr19:21328122..21331831-chr19:21332882..21335579,3	K562	blood:
33	chr19:21329795..21332186-chr19:21344748..21346568,2	K562	blood:
34	chr19:21617556..21619117-chr19:21620797..21622887,2	MCF-7	breast:
35	chr19:21510924..21513197-chr19:21688433..21691004,2	MCF-7	breast:
36	chr19:21496090..21497696-chr19:21505089..21507534,2	K562	blood:
37	chr19:21268213..21268800-chr19:21327512..21328424,2	MCF-7	breast:
38	chr19:21325138..21326653-chr19:21327405..21328910,2	K562	blood:
39	chr19:21319136..21321232-chr19:21323817..21326389,2	K562	blood:
40	chr19:21691065..21693260-chr19:21696883..21699244,2	MCF-7	breast:
41	chr19:21552085..21554128-chr19:21570405..21572893,2	K562	blood:
42	chr19:21691580..21693623-chr19:22017806..22019839,2	MCF-7	breast:
43	chr19:21482877..21485011-chr19:21492555..21495180,2	K562	blood:
44	chr19:21647822..21649740-chr19:21686771..21689396,2	MCF-7	breast:
45	chr19:21614539..21617498-chr19:21618431..21621735,3	K562	blood:
46	chr19:21482877..21485011-chr19:21492555..21495180,2	K562	blood:
47	chr19:21501353..21503397-chr19:21510480..21512126,2	MCF-7	breast:
48	chr19:21496090..21497696-chr19:21505089..21507534,2	K562	blood:
49	chr19:21392274..21393855-chr19:21395475..21398127,2	K562	blood:
50	chr19:21614539..21617498-chr19:21618431..21621735,3	K562	blood:

(count:128 , 50 per page) page: 1 2 3

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF429-1	chr19:21681001-21682100	ENSG00000248094
2	lnc-ZNF738-5	chr19:21465045-21465156	ucscGeneNc_uc002nqb_2
3	lnc-ZNF708-3	chr19:21473948-21474588	NONHSAT063696
4	lnc-ZNF708-9	chr19:21427914-21428043	NONHSAT063692
5	lnc-ZNF429-1	chr19:21681001-21682695	NONHSAT063715
6	lnc-ZNF738-1	chr19:21541735-21541945	NR_027130
7	lnc-ZNF708-2	chr19:21637185-21637274	ENSG00000268119.1
8	lnc-ZNF429-1	chr19:21674016-21674113	ENSG00000248094
9	lnc-ZNF429-1	chr19:21665939-21666056	ENSG00000248094
10	lnc-ZNF738-4	chr19:21605715-21605751	NONHSAT063702
11	lnc-ZNF429-1	chr19:21674016-21674113	ENSG00000268658.1
12	lnc-ZNF429-1	chr19:21668907-21668955	NONHSAT063711
13	lnc-ZNF100-3	chr19:21737442-21737754	ENSG00000268081.1
14	lnc-ZNF429-1	chr19:21676922-21677133	ENSG00000248094
15	lnc-ZNF429-1	chr19:21668379-21668468	ENSG00000268658.1
16	lnc-ZNF738-5	chr19:21465851-21465953	ucscGeneNc_uc002nqb_2
17	lnc-ZNF429-1	chr19:21673603-21673679	ENSG00000248094
18	lnc-ZNF738-5	chr19:21472841-21472991	ucscGeneNc_uc002nqb_2
19	lnc-ZNF429-1	chr19:21672467-21672572	NONHSAT063711
20	lnc-ZNF429-1	chr19:21668379-21668468	ENSG00000248094
21	lnc-ZNF429-1	chr19:21677896-21678009	ENSG00000248094
22	lnc-ZNF429-1	chr19:21673205-21673316	NONHSAT063714
23	lnc-ZNF429-1	chr19:21677896-21678009	NONHSAT063714
24	lnc-ZNF429-1	chr19:21673205-21673316	ENSG00000268658.1
25	lnc-ZNF708-5	chr19:21458825-21459134	NONHSAT063694
26	lnc-ZNF708-11	chr19:21704145-21704698	NONHSAT063722
27	lnc-ZNF708-7	chr19:21544979-21546181	ucscGeneNc_uc002nqe_1
28	lnc-ZNF429-1	chr19:21677896-21678009	ENSG00000268658.1
29	lnc-ZNF429-1	chr19:21673205-21673316	NONHSAT063713
30	lnc-ZNF429-1	chr19:21673791-21673904	ENSG00000248094
31	lnc-ZNF429-1	chr19:21666176-21666333	ENSG00000248094
32	lnc-ZNF431-2	chr19:21367295-21367400	NONHSAT063688
33	lnc-ZNF100-3	chr19:21744136-21747283	XLOC_013263
34	lnc-ZNF708-2	chr19:21631931-21632179	ENSG00000268119.1
35	lnc-ZNF429-3	chr19:21688787-21688882	NONHSAT063719
36	lnc-ZNF429-1	chr19:21671061-21671224	NONHSAT063714
37	lnc-ZNF429-1	chr19:21676922-21677133	NONHSAT063711
38	lnc-ZNF429-1	chr19:21668689-21668955	NONHSAT063713
39	lnc-ZNF708-2	chr19:21639263-21639390	ENSG00000268119.1
40	lnc-ZNF429-1	chr19:21679454-21679524	ENSG00000268658.1
41	lnc-ZNF429-1	chr19:21674011-21674113	NONHSAT063713
42	lnc-ZNF429-1	chr19:21676922-21677133	ENSG00000268658.1
43	lnc-ZNF429-1	chr19:21673205-21673316	ENSG00000248094
44	lnc-ZNF429-1	chr19:21677896-21678009	NONHSAT063711
45	lnc-ZNF429-1	chr19:21671113-21671258	ENSG00000268658.1
46	lnc-ZNF429-1	chr19:21676068-21676649	NONHSAT063711
47	lnc-ZNF708-2	chr19:21636352-21636579	ENSG00000268119.1
48	lnc-ZNF429-1	chr19:21676922-21677133	NONHSAT063713
49	lnc-ZNF429-1	chr19:21666176-21666333	NONHSAT063711
50	lnc-ZNF738-4	chr19:21588080-21588658	NONHSAT063702

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF714	hsa-miR-222-3p	chr19:21304966-21304986
2	ZNF493	hsa-miR-155-5p	chr19:21610187-21610212

Variant related genes	Relation type
ENSG00000269237	TF binding region
ENSG00000268119	TF binding region
RPL36AP51	TF binding region
ZNF429	TF binding region
ENSG00000268892	TF binding region
VN1R81P	TF binding region
VN1R83P	TF binding region
ENSG00000269839	TF binding region
ZNF738	TF binding region
VN1R82P	TF binding region
ENSG00000213976	TF binding region
ZNF493	TF binding region
LINC00664	TF binding region
ZNF431	TF binding region
ENSG00000268322	TF binding region
RNA5SP469	TF binding region
ENSG00000268705	TF binding region
ENSG00000256240	TF binding region
RPL7AP10	TF binding region
ZNF708	TF binding region
ENSG00000268731	TF binding region
ENSG00000268747	TF binding region
ENSG00000269237	CpG island
ENSG00000268119	CpG island
RPL36AP51	CpG island
ZNF429	CpG island
ENSG00000268892	CpG island
VN1R81P	CpG island
VN1R83P	CpG island
ENSG00000269839	CpG island
ZNF738	CpG island
VN1R82P	CpG island
ENSG00000213976	CpG island
ZNF493	CpG island
LINC00664	CpG island
ZNF431	CpG island
ENSG00000268322	CpG island
RNA5SP469	CpG island
ENSG00000268705	CpG island
ENSG00000256240	CpG island
RPL7AP10	CpG island
ZNF708	CpG island
ENSG00000268731	CpG island
ENSG00000268747	CpG island
ENSG00000196705	chromatin interactions
ENSG00000268322	chromatin interactions
ENSG00000172687	chromatin interactions
ENSG00000196268	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000268995	chromatin interactions
ENSG00000269237	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000198521	chromatin interactions
ENSG00000268119	chromatin interactions
ENSG00000197013	chromatin interactions
ENSG00000188229	chromatin interactions
ENSG00000182400	chromatin interactions
ENSG00000240522	chromatin interactions
ENSG00000182141	chromatin interactions
ENSG00000160352	chromatin interactions
WEE1	miRNA target sites
MED13	miRNA target sites
SPATS2	miRNA target sites
KCNG3	miRNA target sites
NDEL1	miRNA target sites
IRF2BP2	miRNA target sites
ZNF326	miRNA target sites
C2orf42	miRNA target sites
RUNX1T1	miRNA target sites
VPS4A	miRNA target sites
TDP1	miRNA target sites
PHKA1	miRNA target sites
GPR180	miRNA target sites

Extended variants
information (count: 18537 )
Associated
traits (count: 45 )

Variant overlapped rSNPs/rCNVs (count:18537 , 50 per page) page: 1 2 3 4 5 6 7 ... 371

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs184510517	chr19:21278502-21278503	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs566720712	chr19:21278507-21278508	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs535581089	chr19:21278540-21278541	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs75814775	chr19:21278600-21278601	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs555790382	chr19:21278613-21278614	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs143518052	chr19:21278616-21278617	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs148009128	chr19:21278637-21278638	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs558164216	chr19:21278656-21278657	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs369185543	chr19:21278717-21278718	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs578027186	chr19:21278721-21278722	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs546382846	chr19:21278734-21278735	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs540527469	chr19:21278779-21278780	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs559814323	chr19:21278840-21278841	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs373409555	chr19:21278852-21278853	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs73022639	chr19:21278906-21278907	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs542372105	chr19:21278912-21278913	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs562574081	chr19:21278950-21278951	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs531283156	chr19:21278954-21278955	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs189522848	chr19:21278970-21278971	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs564528865	chr19:21278986-21278987	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs34136415	chr19:21279011-21279012	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs373751646	chr19:21279049-21279050	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs181342426	chr19:21279066-21279067	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs199928739	chr19:21279103-21279104	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs201771651	chr19:21279104-21279105	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs72242396	chr19:21279105-21279106	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs386388718	chr19:21279107-21279108	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs72532380	chr19:21279108-21279109	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs71176810	chr19:21279109-21279110	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs141609403	chr19:21279127-21279128	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs144614039	chr19:21279145-21279146	Weak transcription ZNF genes & repeats Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs74929985	chr19:21279235-21279236	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs549233047	chr19:21279259-21279260	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs139001424	chr19:21279276-21279277	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs537939107	chr19:21279284-21279285	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs550241756	chr19:21279300-21279301	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs189062536	chr19:21279301-21279302	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs142277804	chr19:21279326-21279327	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs116340980	chr19:21279345-21279346	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs554070858	chr19:21279361-21279362	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs73022640	chr19:21279386-21279387	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs542834140	chr19:21279450-21279451	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs562526632	chr19:21279471-21279472	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs78119361	chr19:21279483-21279484	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs186997253	chr19:21279492-21279493	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs576127265	chr19:21279537-21279538	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs544700381	chr19:21279552-21279553	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs146359821	chr19:21279568-21279569	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs190684694	chr19:21279575-21279576	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs180833707	chr19:21279592-21279593	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:45)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	22522925	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Glioma	20126413	CNVD

Chromatin state (count:10479 , 50 per page) page: 1 2 3 4 5 6 7 ... 210

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:21247400-21289600	Weak transcription	Aorta	Aorta
2	chr19:21265600-21286400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr19:21265600-21295800	Weak transcription	Small Intestine	intestine
4	chr19:21265600-21300000	Weak transcription	Brain Angular Gyrus	brain
5	chr19:21265600-21305200	Weak transcription	Psoas Muscle	Psoas
6	chr19:21265800-21282600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr19:21265800-21289800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr19:21265800-21290600	Weak transcription	Adipose Nuclei	Adipose
9	chr19:21265800-21297200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr19:21265800-21297200	Weak transcription	Brain Cingulate Gyrus	brain
11	chr19:21265800-21299600	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr19:21265800-21299800	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr19:21265800-21302200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr19:21265800-21302800	Weak transcription	Fetal Muscle Trunk	muscle
15	chr19:21265800-21303000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
16	chr19:21266000-21278800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr19:21266000-21286000	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr19:21266000-21287600	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr19:21266000-21287800	Weak transcription	Duodenum Mucosa	Duodenum
20	chr19:21266000-21288400	Weak transcription	Primary neutrophils fromperipheralblood	blood
21	chr19:21266000-21289400	Weak transcription	Primary hematopoietic stem cells	blood
22	chr19:21266000-21290800	Weak transcription	Brain Anterior Caudate	brain
23	chr19:21266000-21290800	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr19:21266000-21290800	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr19:21266000-21292600	Weak transcription	Fetal Kidney	kidney
26	chr19:21266000-21297400	Weak transcription	HUVEC	blood vessel
27	chr19:21266200-21288600	Weak transcription	Thymus	Thymus
28	chr19:21266200-21288800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr19:21266200-21289800	Weak transcription	Primary T cells fromperipheralblood	blood
30	chr19:21266200-21292400	Weak transcription	Primary T cells from cord blood	blood
31	chr19:21266200-21296600	Weak transcription	Primary T helper cells PMA-I stimulated	--
32	chr19:21266200-21301600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr19:21266400-21288200	Weak transcription	Brain Germinal Matrix	brain
34	chr19:21266600-21279600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
35	chr19:21266800-21292600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr19:21267000-21284200	Weak transcription	Fetal Muscle Leg	muscle
37	chr19:21267000-21292800	Strong transcription	HUES48 Cell Line	embryonic stem cell
38	chr19:21267200-21295800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr19:21267400-21281000	Weak transcription	HMEC	breast
40	chr19:21267400-21282200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr19:21267400-21284000	Weak transcription	Hela-S3	cervix
42	chr19:21267400-21284400	Weak transcription	Osteobl	bone
43	chr19:21267800-21284400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
44	chr19:21269200-21281200	Weak transcription	Fetal Intestine Large	intestine
45	chr19:21269800-21281000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr19:21270800-21286400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr19:21271200-21296000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr19:21272600-21284000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr19:21272600-21284000	Weak transcription	Dnd41	blood
50	chr19:21273600-21281800	Weak transcription	Monocytes-CD14+_RO01746	blood

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