Variant report

Variant	esv3519235
Chromosome Location	chr1:189704508-189783359
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:264)
CpG islands
(count:122)
Chromatin interactive
region (count:11)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:264 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:189743917-189744230	HepG2	liver:	n/a	n/a
2	ATF1	chr1:189759191-189759268	K562	blood:	n/a	n/a
3	BACH1	chr1:189774960-189775194	H1-hESC	embryonic stem cell:	n/a	n/a
4	BCL3	chr1:189743704-189744394	A549	lung:	n/a	chr1:189744338-189744347
5	CEBPB	chr1:189731420-189731730	HepG2	liver:	n/a	chr1:189731575-189731586
6	CEBPB	chr1:189743902-189744361	MCF-7	breast:	n/a	chr1:189743903-189743914
7	CEBPB	chr1:189738671-189738934	HepG2	liver:	n/a	n/a
8	CEBPB	chr1:189739895-189740150	A549	lung:	n/a	n/a
9	CEBPB	chr1:189743808-189744388	MCF-7	breast:	n/a	chr1:189743903-189743914
10	CEBPB	chr1:189743808-189744409	A549	lung:	n/a	chr1:189743903-189743914
11	CEBPB	chr1:189718405-189718652	A549	lung:	n/a	chr1:189718486-189718497
12	CEBPB	chr1:189718442-189718647	HepG2	liver:	n/a	chr1:189718486-189718497
13	CEBPB	chr1:189738790-189738826	H1-hESC	embryonic stem cell:	n/a	n/a
14	CEBPB	chr1:189738620-189739003	IMR90	lung:	n/a	n/a
15	CEBPB	chr1:189769201-189769380	A549	lung:	n/a	chr1:189769331-189769342 chr1:189769332-189769343
16	CEBPB	chr1:189738746-189738942	A549	lung:	n/a	n/a
17	CEBPB	chr1:189769228-189769482	HepG2	liver:	n/a	chr1:189769331-189769342 chr1:189769332-189769343
18	CEBPB	chr1:189731505-189731602	K562	blood:	n/a	chr1:189731575-189731586
19	CTCF	chr1:189772560-189772710	BE2_C	brain:	n/a	n/a
20	CTCF	chr1:189718660-189718729	MCF-7	breast:	n/a	n/a
21	CTCF	chr1:189738460-189738610	AG04450	lung:	n/a	n/a
22	CTCF	chr1:189772660-189772810	HCT-116	colon:	n/a	n/a
23	CTCF	chr1:189756934-189756961	GM10248	blood:	n/a	n/a
24	CTCF	chr1:189772620-189772770	Hela-S3	cervix:	n/a	n/a
25	CTCF	chr1:189772620-189772770	HRPEpiC	eye:	n/a	n/a
26	CTCF	chr1:189772560-189772710	HBMEC	blood vessel:	n/a	n/a
27	CTCF	chr1:189747632-189747687	GM13976	blood:	n/a	n/a
28	CTCF	chr1:189772600-189772750	HRE	kidney:	n/a	n/a
29	CTCF	chr1:189772620-189772770	HBMEC	blood vessel:	n/a	n/a
30	CTCF	chr1:189745863-189745931	GM20000	blood:	n/a	n/a
31	CTCF	chr1:189772620-189772770	A549	lung:	n/a	n/a
32	CTCF	chr1:189772555-189772759	H1-hESC	embryonic stem cell:	n/a	n/a
33	CTCF	chr1:189713056-189713086	Pancreas_OC	pancreas:	n/a	n/a
34	CTCF	chr1:189772620-189772770	BE2_C	brain:	n/a	n/a
35	CTCF	chr1:189750940-189751090	HAc	cerebellar:	n/a	n/a
36	CTCF	chr1:189772580-189772730	MCF-7	breast:	n/a	n/a
37	CTCF	chr1:189772640-189772790	HEK293	kidney:	n/a	n/a
38	CTCF	chr1:189772580-189772730	GM12873	blood:	n/a	n/a
39	CTCF	chr1:189728266-189728301	Lung_OC	lung:	n/a	n/a
40	CTCF	chr1:189772540-189772690	GM12866	blood:	n/a	n/a
41	CTCF	chr1:189772560-189772710	GM12873	blood:	n/a	n/a
42	CTCF	chr1:189772640-189772790	HCT-116	colon:	n/a	n/a
43	CTCF	chr1:189772560-189772710	MCF-7	breast:	n/a	n/a
44	CTCF	chr1:189772600-189772750	GM12868	blood:	n/a	n/a
45	CTCF	chr1:189772600-189772750	RPTEC	kidney:	n/a	n/a
46	CTCF	chr1:189772620-189772770	HPAF	blood vessel:	n/a	n/a
47	CTCF	chr1:189772600-189772750	GM12872	blood:	n/a	n/a
48	CTCF	chr1:189772620-189772770	HCPEpiC	choroid plexus:	n/a	n/a
49	E2F4	chr1:189721194-189721701	MCF10A-Er-Src	breast:	n/a	n/a
50	E2F4	chr1:189776518-189776660	MCF10A-Er-Src	breast:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:189744005-189744055	GM19239	blood:	n/a
2	chr1:189744005-189744055	Caco-2	colon:	n/a
3	chr1:189722103-189722153	NHDF-neo	bronchial:	n/a
4	chr1:189722103-189722153	HRE	kidney:	n/a
5	chr1:189744005-189744055	LNCaP	prostate:	n/a
6	chr1:189744005-189744055	GM06990	blood:	n/a
7	chr1:189744005-189744055	HRE	kidney:	n/a
8	chr1:189722103-189722153	HRCEpiC	kidney:	n/a
9	chr1:189722103-189722153	BE2_C	brain:	n/a
10	chr1:189722103-189722153	HIPEpiC	eye:	n/a
11	chr1:189722103-189722153	HL-60	blood:	n/a
12	chr1:189744005-189744055	GM12892	blood:	n/a
13	chr1:189722103-189722153	LNCaP	prostate:	n/a
14	chr1:189744005-189744055	HEEpiC	esophagus:	n/a
15	chr1:189744005-189744055	BE2_C	brain:	n/a
16	chr1:189722103-189722153	MCF-7	breast:	n/a
17	chr1:189744005-189744055	AG04449	skin:	fetal
18	chr1:189722103-189722153	T-47D	breast:	n/a
19	chr1:189722103-189722153	AG09309	skin:	n/a
20	chr1:189744005-189744055	ovcar-3	ovarian:	n/a
21	chr1:189744005-189744055	CMK	blood:	n/a
22	chr1:189744005-189744055	PrEC	prostate:	n/a
23	chr1:189744005-189744055	AG04450	lung:	fetal
24	chr1:189744005-189744055	IMR90	lung:	fetal
25	chr1:189744005-189744055	AG09319	gingival:	n/a
26	chr1:189744005-189744055	GM12878	blood:	n/a
27	chr1:189722103-189722153	ProgFib	skin:	n/a
28	chr1:189744005-189744055	K562	blood:	n/a
29	chr1:189744005-189744055	GM12891	blood:	n/a
30	chr1:189722103-189722153	RPTEC	kidney:	n/a
31	chr1:189722103-189722153	U87	brain:	n/a
32	chr1:189722103-189722153	ECC-1	luminal epithelium:	n/a
33	chr1:189722103-189722153	ovcar-3	ovarian:	n/a
34	chr1:189722103-189722153	AG09319	gingival:	n/a
35	chr1:189722103-189722153	A549	lung:	n/a
36	chr1:189744005-189744055	NHBE	bronchial:	n/a
37	chr1:189744005-189744055	HMEC	breast:	n/a
38	chr1:189722103-189722153	AG10803	skin:	n/a
39	chr1:189722103-189722153	K562	blood:	n/a
40	chr1:189744005-189744055	SK-N-MC	brain:	n/a
41	chr1:189722103-189722153	IMR90	lung:	fetal
42	chr1:189744005-189744055	AG09309	skin:	n/a
43	chr1:189744005-189744055	Jurkat	blood:	n/a
44	chr1:189744005-189744055	HL-60	blood:	n/a
45	chr1:189722103-189722153	SK-N-SH_RA	brain:	n/a
46	chr1:189744005-189744055	NH-A	brain:	n/a
47	chr1:189722103-189722153	Hepatocyte	liver:	n/a
48	chr1:189722103-189722153	AG04449	skin:	fetal
49	chr1:189722103-189722153	HCM	heart:	n/a
50	chr1:189744005-189744055	HUVEC	blood vessel:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:189709848..189710556-chr1:189743646..189744501,3	MCF-7	breast:
2	chr1:189746682..189748361-chr1:189748606..189750164,2	MCF-7	breast:
3	chr1:189740038..189741669-chr1:189745873..189748337,2	K562	blood:
4	chr1:189740038..189741669-chr1:189745873..189748337,2	K562	blood:
5	chr1:189778329..189781313-chr1:189784587..189786793,2	MCF-7	breast:
6	chr1:189705345..189707314-chr1:189708117..189710746,3	MCF-7	breast:
7	chr1:189705345..189707314-chr1:189708117..189710746,3	MCF-7	breast:
8	chr1:189709848..189710556-chr1:189743646..189744501,3	MCF-7	breast:
9	chr1:189746682..189748361-chr1:189748606..189750164,2	MCF-7	breast:
10	chr1:189705156..189706947-chr1:189708552..189710958,2	K562	blood:
11	chr1:189705156..189706947-chr1:189708552..189710958,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RGS18-7	chr1:189746390-189746467	XLOC_000503
2	lnc-RGS18-7	chr1:189744595-189744695	XLOC_000503
3	lnc-RGS18-7	chr1:189760709-189760893	XLOC_000503

No data

Variant related genes	Relation type
ENSG00000232212	TF binding region
ENSG00000232212	CpG island
SOX11	miRNA target sites
SOX13	miRNA target sites

Extended variants
information (count: 752 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:752 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs573140979	chr1:189720601-189720602	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs80001584	chr1:189720647-189720648	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs558782303	chr1:189720660-189720661	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs374865761	chr1:189720670-189720671	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs577955118	chr1:189720765-189720766	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs188315819	chr1:189720792-189720793	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs114323314	chr1:189720832-189720833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs569510345	chr1:189720857-189720858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs542519628	chr1:189720921-189720922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs536872109	chr1:189720926-189720927	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs559333309	chr1:189721015-189721016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs35037402	chr1:189721020-189721021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs397982357	chr1:189721021-189721022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs200369523	chr1:189721042-189721043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs371316466	chr1:189721049-189721050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs528051691	chr1:189721104-189721105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs79172661	chr1:189721115-189721116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs193184064	chr1:189721130-189721131	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs144685573	chr1:189721164-189721165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs376703998	chr1:189721200-189721201	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs183867830	chr1:189721243-189721244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs569407752	chr1:189721402-189721403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs530361302	chr1:189721478-189721479	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs546957543	chr1:189721506-189721507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs375290358	chr1:189721629-189721630	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs566906364	chr1:189721768-189721769	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs147617086	chr1:189721786-189721787	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs10800627	chr1:189721806-189721807	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs142120935	chr1:189721846-189721847	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs187913855	chr1:189721847-189721848	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs150179180	chr1:189721871-189721872	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs201980294	chr1:189721878-189721879	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs573863441	chr1:189721931-189721932	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs542934394	chr1:189721951-189721952	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs552988576	chr1:189721952-189721953	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs574357445	chr1:189721967-189721968	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs371308141	chr1:189721970-189721971	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs572835157	chr1:189721995-189721996	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs553655263	chr1:189722066-189722067	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs10737561	chr1:189722078-189722079	Flanking Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs530586721	chr1:189722094-189722095	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs138639855	chr1:189722108-189722109	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs543888527	chr1:189722117-189722118	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs561175818	chr1:189722118-189722119	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs192530620	chr1:189722135-189722136	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs541895782	chr1:189722136-189722137	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs183465451	chr1:189722141-189722142	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs532797012	chr1:189722195-189722196	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs188238628	chr1:189722220-189722221	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs569238142	chr1:189722234-189722235	Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	20688739	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21611746	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17899364	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Lung adenocarcinoma	17086460	CNVD
Glioblastoma multiforme	22286061	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:189720600-189720800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr1:189720800-189721600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr1:189721600-189722400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr1:189721600-189722600	Enhancers	Fetal Heart	heart
5	chr1:189721600-189723000	Enhancers	Fetal Lung	lung
6	chr1:189721800-189722000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr1:189722000-189722600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr1:189722000-189722600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr1:189722400-189723000	Enhancers	Hela-S3	cervix
10	chr1:189722600-189722800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr1:189733200-189734200	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr1:189733400-189734000	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr1:189733400-189734000	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr1:189733400-189734400	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr1:189743400-189743600	Enhancers	A549	lung
16	chr1:189743600-189744800	Flanking Active TSS	A549	lung
17	chr1:189744000-189744600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr1:189744000-189745000	Enhancers	Muscle Satellite Cultured Cells	--
19	chr1:189744000-189745200	Enhancers	Fetal Heart	heart
20	chr1:189744200-189745000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr1:189744200-189745000	Enhancers	NH-A	brain
22	chr1:189744400-189744800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr1:189744400-189745000	Enhancers	Hela-S3	cervix
24	chr1:189744800-189745000	Enhancers	A549	lung
25	chr1:189745000-189745200	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr1:189745200-189746200	Weak transcription	Fetal Heart	heart
27	chr1:189746200-189746800	Enhancers	Fetal Heart	heart
28	chr1:189751000-189751800	Enhancers	Fetal Brain Male	brain
29	chr1:189751400-189751800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr1:189751800-189754800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr1:189754600-189755600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr1:189754800-189756200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr1:189755600-189756000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr1:189756000-189756200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
35	chr1:189756200-189756400	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr1:189756200-189756600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr1:189756200-189756600	Active TSS	Fetal Brain Female	brain
38	chr1:189756400-189756600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr1:189756400-189756600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr1:189756400-189756800	Active TSS	Brain Substantia Nigra	brain
41	chr1:189756600-189757600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr1:189757200-189757600	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr1:189761800-189765400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr1:189773400-189773800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr1:189773400-189773800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr1:189773400-189773800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr1:189773400-189774000	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr1:189773400-189774000	Enhancers	HUES48 Cell Line	embryonic stem cell
49	chr1:189773400-189774000	Enhancers	HUES64 Cell Line	embryonic stem cell
50	chr1:189773400-189774000	Enhancers	iPS-18 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links