Variant report

Variant esv3584654
Chromosome Location chr12:11433876-11523026
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11407400-11440200 Weak transcription Primary T cells from cord blood blood
2 chr12:11433400-11434000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:11433400-11434200 Strong transcription Adipose Nuclei Adipose
4 chr12:11433800-11434000 ZNF genes & repeats Liver Liver
5 chr12:11434200-11434400 ZNF genes & repeats Adipose Nuclei Adipose
6 chr12:11449800-11450600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
7 chr12:11450200-11450600 Enhancers Stomach Mucosa stomach
8 chr12:11450200-11450800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
9 chr12:11450200-11450800 Active TSS HUES6 Cell Line embryonic stem cell
10 chr12:11450200-11450800 Active TSS HUES64 Cell Line embryonic stem cell
11 chr12:11450200-11450800 Active TSS iPS-20b Cell Line embryonic stem cell
12 chr12:11450400-11450800 Active TSS iPS-15b Cell Line embryonic stem cell
13 chr12:11450400-11450800 Active TSS Rectal Mucosa Donor 31 rectum
14 chr12:11460200-11460800 Enhancers HUVEC blood vessel
15 chr12:11461200-11462200 Enhancers Spleen Spleen
16 chr12:11467000-11467200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:11473600-11475800 Enhancers Fetal Heart heart
18 chr12:11474600-11475000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr12:11475400-11478200 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr12:11478200-11479200 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr12:11478800-11479400 Enhancers HMEC breast
22 chr12:11479000-11479200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr12:11479200-11480200 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr12:11479200-11493000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr12:11486800-11487000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr12:11493000-11493200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr12:11493000-11493400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
28 chr12:11493000-11494200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:11494200-11496400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr12:11496600-11496800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr12:11496800-11499400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr12:11497200-11497800 Enhancers HepG2 liver
33 chr12:11497800-11498600 Enhancers Fetal Intestine Small intestine
34 chr12:11498200-11498600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
35 chr12:11504000-11505000 Enhancers HUVEC blood vessel
36 chr12:11505000-11510400 Weak transcription HUVEC blood vessel
37 chr12:11506600-11507000 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr12:11510000-11511000 Enhancers Primary neutrophils fromperipheralblood blood
39 chr12:11510000-11511200 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr12:11510400-11511000 Enhancers HUVEC blood vessel
41 chr12:11511000-11512400 Weak transcription HUVEC blood vessel
42 chr12:11511200-11519600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr12:11512400-11514000 Enhancers HUVEC blood vessel
44 chr12:11513000-11513800 Enhancers HMEC breast
45 chr12:11513000-11514000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr12:11513000-11514000 Enhancers NHEK skin
47 chr12:11513400-11513600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr12:11513600-11514200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr12:11513600-11521200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr12:11516600-11517000 Enhancers HepG2 liver

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