Variant report

Variant	esv3693078
Chromosome Location	chr11:35179651-35217745
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:35212245-35212521	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:35194753-35195096	HepG2	liver:	n/a	n/a
3	ATF1	chr11:35182060-35182303	K562	blood:	n/a	n/a
4	ATF2	chr11:35208765-35209181	GM12878	blood:	n/a	n/a
5	ATF2	chr11:35187309-35188167	GM12878	blood:	n/a	n/a
6	ATF2	chr11:35187310-35187972	GM12878	blood:	n/a	n/a
7	ATF3	chr11:35188083-35188607	A549	lung:	n/a	n/a
8	BACH1	chr11:35202998-35203161	K562	blood:	n/a	n/a
9	BATF	chr11:35193580-35193816	GM12878	blood:	n/a	n/a
10	BATF	chr11:35208723-35209029	GM12878	blood:	n/a	chr11:35208842-35208853
11	BATF	chr11:35208829-35209017	GM12878	blood:	n/a	chr11:35208842-35208853
12	BCL11A	chr11:35208728-35208997	GM12878	blood:	n/a	n/a
13	BCL3	chr11:35188029-35188590	A549	lung:	n/a	n/a
14	BCLAF1	chr11:35187159-35188035	GM12878	blood:	n/a	n/a
15	BHLHE40	chr11:35184420-35184646	K562	blood:	n/a	n/a
16	BHLHE40	chr11:35185288-35185608	GM12878	blood:	n/a	n/a
17	BHLHE40	chr11:35184377-35184627	GM12878	blood:	n/a	n/a
18	BHLHE40	chr11:35187198-35187964	GM12878	blood:	n/a	n/a
19	BHLHE40	chr11:35209179-35209242	GM12878	blood:	n/a	n/a
20	BRCA1	chr11:35196390-35196411	GM12878	blood:	n/a	n/a
21	BRCA1	chr11:35188193-35188725	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr11:35188913-35189191	HepG2	liver:	n/a	chr11:35189053-35189064 chr11:35189053-35189066 chr11:35189054-35189065 chr11:35189053-35189066 chr11:35189053-35189066 chr11:35189055-35189064
23	CEBPB	chr11:35212352-35212493	HepG2	liver:	n/a	n/a
24	CEBPB	chr11:35212634-35213008	H1-hESC	embryonic stem cell:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
25	CEBPB	chr11:35199694-35199864	K562	blood:	n/a	chr11:35199758-35199769 chr11:35199757-35199768
26	CEBPB	chr11:35212626-35213012	A549	lung:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
27	CEBPB	chr11:35199634-35199886	Hela-S3	cervix:	n/a	chr11:35199758-35199769 chr11:35199757-35199768
28	CEBPB	chr11:35194832-35195117	A549	lung:	n/a	chr11:35194988-35194999
29	CEBPB	chr11:35200310-35200761	A549	lung:	n/a	chr11:35200407-35200418 chr11:35200405-35200418 chr11:35200407-35200418
30	CEBPB	chr11:35187335-35187501	HepG2	liver:	n/a	n/a
31	CEBPB	chr11:35212629-35213012	K562	blood:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
32	CEBPB	chr11:35188887-35189233	IMR90	lung:	n/a	chr11:35189053-35189064 chr11:35189053-35189066 chr11:35189054-35189065 chr11:35189053-35189066 chr11:35189053-35189066 chr11:35189055-35189064
33	CEBPB	chr11:35212733-35212904	K562	blood:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
34	CEBPB	chr11:35212590-35213031	A549	lung:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
35	CEBPB	chr11:35194847-35195030	HepG2	liver:	n/a	chr11:35194988-35194999
36	CEBPB	chr11:35184446-35184683	A549	lung:	n/a	n/a
37	CEBPB	chr11:35195495-35195766	A549	lung:	n/a	chr11:35195595-35195606
38	CEBPB	chr11:35199588-35199948	HepG2	liver:	n/a	chr11:35199758-35199769 chr11:35199757-35199768
39	CEBPB	chr11:35199596-35199936	A549	lung:	n/a	chr11:35199758-35199769 chr11:35199757-35199768
40	CEBPB	chr11:35200311-35200770	ECC-1	luminal epithelium:	n/a	chr11:35200407-35200418 chr11:35200405-35200418 chr11:35200407-35200418
41	CEBPB	chr11:35187028-35188790	HCT-116	colon:	n/a	chr11:35188508-35188516 chr11:35187227-35187240
42	CEBPB	chr11:35194716-35195178	Hela-S3	cervix:	n/a	chr11:35194988-35194999
43	CEBPB	chr11:35194658-35195245	A549	lung:	n/a	chr11:35194988-35194999
44	CEBPB	chr11:35187092-35188561	Hela-S3	cervix:	n/a	chr11:35188508-35188516 chr11:35187227-35187240
45	CEBPB	chr11:35195477-35195782	HepG2	liver:	n/a	chr11:35195595-35195606
46	CEBPB	chr11:35188749-35189349	A549	lung:	n/a	chr11:35189053-35189064 chr11:35189053-35189066 chr11:35189054-35189065 chr11:35189053-35189066 chr11:35189053-35189066 chr11:35189055-35189064
47	CEBPB	chr11:35186816-35189336	HCT-116	colon:	n/a	chr11:35188508-35188516 chr11:35189053-35189064 chr11:35189053-35189066 chr11:35189054-35189065 chr11:35189053-35189066 chr11:35187227-35187240 chr11:35189053-35189066 chr11:35189055-35189064
48	CEBPB	chr11:35212608-35213012	ECC-1	luminal epithelium:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
49	CEBPB	chr11:35212290-35213015	IMR90	lung:	n/a	chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825 chr11:35212816-35212825
50	CEBPB	chr11:35213858-35214172	HepG2	liver:	n/a	chr11:35213959-35213970

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:35188437-35188487	NT2-D1	testis:	n/a
2	chr11:35179802-35179852	NT2-D1	testis:	n/a
3	chr11:35195513-35195563	IMR90	lung:	fetal
4	chr11:35179802-35179852	HEK293	kidney:	embryo
5	chr11:35198201-35198251	GM12878	blood:	n/a
6	chr11:35186440-35186490	BE2_C	brain:	n/a
7	chr11:35195513-35195563	NH-A	brain:	n/a
8	chr11:35186440-35186490	PFSK-1	brain:	n/a
9	chr11:35179802-35179852	ProgFib	skin:	n/a
10	chr11:35195513-35195563	GM12878	blood:	n/a
11	chr11:35198201-35198251	BE2_C	brain:	n/a
12	chr11:35188437-35188487	Caco-2	colon:	n/a
13	chr11:35201133-35201183	Caco-2	colon:	n/a
14	chr11:35179802-35179852	T-47D	breast:	n/a
15	chr11:35188437-35188487	Hela-S3	cervix:	n/a
16	chr11:35201133-35201183	HCM	heart:	n/a
17	chr11:35201133-35201183	NHDF-neo	bronchial:	n/a
18	chr11:35201133-35201183	LNCaP	prostate:	n/a
19	chr11:35188437-35188487	CMK	blood:	n/a
20	chr11:35195513-35195563	HepG2	liver:	n/a
21	chr11:35195513-35195563	HIPEpiC	eye:	n/a
22	chr11:35198201-35198251	HCT-116	colon:	n/a
23	chr11:35198201-35198251	GM12891	blood:	n/a
24	chr11:35186440-35186490	SK-N-MC	brain:	n/a
25	chr11:35201133-35201183	HCPEpiC	choroid plexus:	n/a
26	chr11:35198201-35198251	SAEC	small airway:	n/a
27	chr11:35198201-35198251	SK-N-MC	brain:	n/a
28	chr11:35186440-35186490	CMK	blood:	n/a
29	chr11:35186440-35186490	HRPEpiC	eye:	n/a
30	chr11:35198201-35198251	HAEpiC	amniotic membrane:	n/a
31	chr11:35198201-35198251	A549	lung:	n/a
32	chr11:35201133-35201183	NH-A	brain:	n/a
33	chr11:35188437-35188487	SK-N-MC	brain:	n/a
34	chr11:35198201-35198251	AG09309	skin:	n/a
35	chr11:35195513-35195563	SKMC	muscle:	n/a
36	chr11:35188437-35188487	ProgFib	skin:	n/a
37	chr11:35201133-35201183	HMEC	breast:	n/a
38	chr11:35186440-35186490	GM12891	blood:	n/a
39	chr11:35195513-35195563	HRCEpiC	kidney:	n/a
40	chr11:35188437-35188487	HRE	kidney:	n/a
41	chr11:35195513-35195563	U87	brain:	n/a
42	chr11:35179802-35179852	Jurkat	blood:	n/a
43	chr11:35179802-35179852	H1-hESC	embryonic stem cell:	embryo
44	chr11:35179802-35179852	GM12891	blood:	n/a
45	chr11:35195513-35195563	Jurkat	blood:	n/a
46	chr11:35201133-35201183	HRE	kidney:	n/a
47	chr11:35198201-35198251	BJ	skin:	n/a
48	chr11:35186440-35186490	NH-A	brain:	n/a
49	chr11:35201133-35201183	GM12892	blood:	n/a
50	chr11:35195513-35195563	T-47D	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:35160028..35162902-chr11:35183937..35186481,3	MCF-7	breast:
2	chr11:35188706..35190323-chr11:35204261..35206876,2	K562	blood:
3	chr11:35195238..35197148-chr11:35385944..35388591,2	MCF-7	breast:
4	chr11:35188706..35190323-chr11:35204261..35206876,2	K562	blood:
5	chr11:35187046..35189640-chr11:35384110..35385949,2	MCF-7	breast:
6	chr11:35193443..35196303-chr11:35198924..35201669,2	MCF-7	breast:
7	chr11:35186608..35189447-chr11:35199235..35201624,2	MCF-7	breast:
8	chr11:35193443..35196303-chr11:35198924..35201669,2	MCF-7	breast:
9	chr11:35199491..35202638-chr11:35207456..35210593,3	MCF-7	breast:
10	chr11:35101233..35103768-chr11:35185557..35187275,2	MCF-7	breast:
11	chr11:35208296..35211320-chr11:35214358..35217497,3	K562	blood:
12	chr11:35199913..35203665-chr11:35205253..35207234,3	K562	blood:
13	chr11:35160960..35162794-chr11:35186248..35188654,2	MCF-7	breast:
14	chr11:35186608..35189447-chr11:35199235..35201624,2	MCF-7	breast:
15	chr11:35184295..35186190-chr11:35191742..35193747,2	MCF-7	breast:
16	chr11:35208907..35210567-chr11:35212909..35215234,2	MCF-7	breast:
17	chr11:35172301..35174738-chr11:35189496..35192114,2	MCF-7	breast:
18	chr11:35198118..35199850-chr11:35204330..35207060,2	K562	blood:
19	chr11:35186531..35188215-chr11:35413426..35415708,2	MCF-7	breast:
20	chr11:35184295..35186190-chr11:35191742..35193747,2	MCF-7	breast:
21	chr11:35199491..35202638-chr11:35207456..35210593,3	MCF-7	breast:
22	chr11:35208907..35210567-chr11:35212909..35215234,2	MCF-7	breast:
23	chr11:35183121..35185456-chr11:35188061..35190243,2	MCF-7	breast:
24	chr11:35183121..35185456-chr11:35188061..35190243,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PDHX-5	chr11:35211473-35211612	NONHSAT018779

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CD44	hsa-miR-520c-3p	chr11:35211491-35211514
2	CD44	hsa-miR-373-3p	chr11:35211492-35211514

Variant related genes	Relation type
CD44	TF binding region
CD44	CpG island
ENSG00000026508	chromatin interactions

Extended variants
information (count: 1478 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:1478 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs353612	chr11:35179651-35179652	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs574801118	chr11:35179666-35179667	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs143094145	chr11:35179672-35179673	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs532472680	chr11:35179674-35179675	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs150463722	chr11:35179675-35179676	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs12282190	chr11:35179689-35179690	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs572312011	chr11:35179702-35179703	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs187701621	chr11:35179730-35179731	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs547713186	chr11:35179748-35179749	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs193241127	chr11:35179802-35179803	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs531969385	chr11:35179803-35179804	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs536551357	chr11:35179851-35179852	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs185717824	chr11:35179862-35179863	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs138257122	chr11:35179902-35179903	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs16926995	chr11:35179903-35179904	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs558645722	chr11:35179976-35179977	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs568761121	chr11:35179978-35179979	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs374178759	chr11:35180014-35180015	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs149645224	chr11:35180056-35180057	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs144370443	chr11:35180057-35180058	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs554155242	chr11:35180074-35180075	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs139815479	chr11:35180089-35180090	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs543729016	chr11:35180134-35180135	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs563508672	chr11:35180214-35180215	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs188649584	chr11:35180217-35180218	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs12283855	chr11:35180253-35180254	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs1885937	chr11:35180260-35180261	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs113455819	chr11:35180263-35180264	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs528584902	chr11:35180266-35180267	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs116246464	chr11:35180277-35180278	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs115162798	chr11:35180281-35180282	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs529979930	chr11:35180306-35180307	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs79435758	chr11:35180317-35180318	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs141583188	chr11:35180341-35180342	Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs577724184	chr11:35180412-35180413	Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
36	rs558359318	chr11:35180491-35180492	Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
37	rs61041005	chr11:35180516-35180517	Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs534416989	chr11:35180529-35180530	Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
39	rs146177599	chr11:35180594-35180595	Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
40	rs574110645	chr11:35180616-35180617	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs59380647	chr11:35180688-35180689	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs139229112	chr11:35180701-35180702	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs142546884	chr11:35180710-35180711	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs191970655	chr11:35180721-35180722	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs150987297	chr11:35180760-35180761	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs111941461	chr11:35180774-35180775	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs184575029	chr11:35180793-35180794	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs550012352	chr11:35180809-35180810	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs370062497	chr11:35180811-35180812	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs542356442	chr11:35180824-35180825	Enhancers Weak transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	21364760	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung squamous cell carcinoma	20842114	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1925 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:35161200-35197400	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
2	chr11:35163800-35183400	Genic enhancers	Primary B cells from peripheral blood	blood
3	chr11:35167200-35179800	Weak transcription	Fetal Lung	lung
4	chr11:35167400-35185800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chr11:35167600-35184200	Genic enhancers	Primary T cells fromperipheralblood	blood
6	chr11:35167600-35186200	Genic enhancers	NHDF-Ad	bronchial
7	chr11:35167600-35186400	Genic enhancers	HMEC	breast
8	chr11:35167800-35185800	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr11:35172200-35196000	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr11:35173400-35180600	Genic enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
11	chr11:35174200-35180000	Weak transcription	HSMMtube	muscle
12	chr11:35174400-35179800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr11:35174400-35180400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr11:35174400-35184000	Weak transcription	GM12878-XiMat	blood
15	chr11:35175200-35180200	Enhancers	Primary T helper naive cells from peripheral blood	blood
16	chr11:35175800-35180800	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr11:35175800-35181800	Enhancers	Duodenum Mucosa	Duodenum
18	chr11:35176600-35182000	Enhancers	Sigmoid Colon	Sigmoid Colon
19	chr11:35176600-35184000	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr11:35177600-35180400	Strong transcription	Monocytes-CD14+_RO01746	blood
21	chr11:35177600-35182200	Enhancers	Colon Smooth Muscle	Colon
22	chr11:35177600-35191000	Genic enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr11:35177800-35179800	Enhancers	Primary T killer memory cells from peripheral blood	blood
24	chr11:35177800-35182600	Genic enhancers	Primary monocytes fromperipheralblood	blood
25	chr11:35177800-35186600	Genic enhancers	Osteobl	bone
26	chr11:35178000-35180000	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr11:35178000-35180600	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
28	chr11:35178000-35180600	Enhancers	Pancreas	Pancrea
29	chr11:35178000-35181600	Enhancers	Adipose Nuclei	Adipose
30	chr11:35178000-35183000	Genic enhancers	Fetal Muscle Leg	muscle
31	chr11:35178200-35179800	Enhancers	Thymus	Thymus
32	chr11:35178200-35180200	Enhancers	Spleen	Spleen
33	chr11:35178200-35181200	Enhancers	Skeletal Muscle Female	skeletal muscle
34	chr11:35178200-35181400	Genic enhancers	Primary T cells from cord blood	blood
35	chr11:35178400-35180600	Enhancers	Esophagus	oesophagus
36	chr11:35178400-35182000	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr11:35178600-35181600	Enhancers	Rectal Mucosa Donor 31	rectum
38	chr11:35178800-35180400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
39	chr11:35178800-35181200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr11:35179000-35180200	Enhancers	Breast Myoepithelial Primary Cells	Breast
41	chr11:35179000-35180800	Enhancers	Psoas Muscle	Psoas
42	chr11:35179000-35180800	Enhancers	HUVEC	blood vessel
43	chr11:35179000-35181200	Enhancers	Aorta	Aorta
44	chr11:35179000-35181800	Enhancers	Placenta	Placenta
45	chr11:35179000-35182000	Enhancers	Left Ventricle	heart
46	chr11:35179000-35186200	Genic enhancers	Hela-S3	cervix
47	chr11:35179000-35186400	Genic enhancers	NHLF	lung
48	chr11:35179200-35179800	Enhancers	HUES48 Cell Line	embryonic stem cell
49	chr11:35179200-35179800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr11:35179200-35180000	Transcr. at gene 5' and 3'	NHEK	skin

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