Variant report

Variant	esv5999
Chromosome Location	chr6:31206410-31285897
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1054)
CpG islands
(count:4891)
Chromatin interactive
region (count:39)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1054 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:31213940-31214200	HepG2	liver:	n/a	n/a
2	ATF1	chr6:31239808-31240131	K562	blood:	n/a	n/a
3	ATF1	chr6:31272445-31272772	K562	blood:	n/a	n/a
4	ATF2	chr6:31272219-31272895	GM12878	blood:	n/a	n/a
5	ATF2	chr6:31235142-31236449	GM12878	blood:	n/a	n/a
6	ATF2	chr6:31234577-31234827	GM12878	blood:	n/a	n/a
7	ATF2	chr6:31272379-31272838	GM12878	blood:	n/a	n/a
8	ATF2	chr6:31239651-31240115	GM12878	blood:	n/a	n/a
9	ATF2	chr6:31235265-31236206	GM12878	blood:	n/a	n/a
10	BACH1	chr6:31239252-31239443	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr6:31239693-31240306	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr6:31276089-31276266	H1-hESC	embryonic stem cell:	n/a	n/a
13	BATF	chr6:31241012-31241391	GM12878	blood:	n/a	n/a
14	BATF	chr6:31241031-31241428	GM12878	blood:	n/a	n/a
15	BCL11A	chr6:31241100-31241317	GM12878	blood:	n/a	n/a
16	BCL11A	chr6:31241052-31241373	GM12878	blood:	n/a	n/a
17	BCL11A	chr6:31234485-31235770	GM12878	blood:	n/a	n/a
18	BCL3	chr6:31235264-31235791	GM12878	blood:	n/a	n/a
19	BCL3	chr6:31235297-31235807	GM12878	blood:	n/a	n/a
20	BCLAF1	chr6:31235169-31236336	GM12878	blood:	n/a	n/a
21	BCLAF1	chr6:31239585-31240141	GM12878	blood:	n/a	chr6:31240011-31240020
22	BCLAF1	chr6:31234491-31234960	GM12878	blood:	n/a	n/a
23	BCLAF1	chr6:31239341-31240264	GM12878	blood:	n/a	chr6:31240011-31240020
24	BCLAF1	chr6:31235268-31236420	GM12878	blood:	n/a	n/a
25	BHLHE40	chr6:31239743-31240181	GM12878	blood:	n/a	n/a
26	BHLHE40	chr6:31239841-31240041	K562	blood:	n/a	n/a
27	BHLHE40	chr6:31239789-31240109	HepG2	liver:	n/a	n/a
28	BHLHE40	chr6:31213852-31214037	HepG2	liver:	n/a	n/a
29	BHLHE40	chr6:31238745-31238982	GM12878	blood:	n/a	n/a
30	BRCA1	chr6:31213867-31214194	Hela-S3	cervix:	n/a	n/a
31	BRCA1	chr6:31239757-31239881	GM12878	blood:	n/a	n/a
32	BRCA1	chr6:31239860-31240081	Hela-S3	cervix:	n/a	n/a
33	CBX3	chr6:31213615-31214272	HCT-116	colon:	n/a	n/a
34	CBX3	chr6:31272647-31272911	K562	blood:	n/a	n/a
35	CBX3	chr6:31273672-31273874	K562	blood:	n/a	n/a
36	CEBPB	chr6:31277750-31277899	A549	lung:	n/a	n/a
37	CEBPB	chr6:31253886-31253955	K562	blood:	n/a	chr6:31253908-31253917
38	CEBPB	chr6:31253791-31254077	HepG2	liver:	n/a	chr6:31253908-31253917
39	CEBPB	chr6:31238263-31238458	IMR90	lung:	n/a	n/a
40	CEBPB	chr6:31221629-31221783	K562	blood:	n/a	chr6:31221632-31221643
41	CEBPB	chr6:31221496-31221819	HepG2	liver:	n/a	chr6:31221632-31221643
42	CEBPB	chr6:31253836-31254077	A549	lung:	n/a	chr6:31253908-31253917
43	CEBPB	chr6:31215549-31215785	IMR90	lung:	n/a	chr6:31215653-31215664
44	CEBPB	chr6:31215509-31215838	HepG2	liver:	n/a	chr6:31215653-31215664
45	CEBPB	chr6:31215581-31215811	A549	lung:	n/a	chr6:31215653-31215664
46	CEBPB	chr6:31240022-31240046	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr6:31221417-31221797	MCF-7	breast:	n/a	chr6:31221632-31221643
48	CEBPB	chr6:31253830-31254055	IMR90	lung:	n/a	chr6:31253908-31253917
49	CEBPB	chr6:31215557-31215720	H1-hESC	embryonic stem cell:	n/a	chr6:31215653-31215664
50	CEBPB	chr6:31277693-31277960	HepG2	liver:	n/a	n/a

(count:4891 , 50 per page) page: 1 2 3 4 5 6 7 ... 98

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31239266-31239316	GM12892	blood:	n/a
2	chr6:31276797-31276847	PrEC	prostate:	n/a
3	chr6:31239247-31239297	AG09319	gingival:	n/a
4	chr6:31238751-31238801	AG09309	skin:	n/a
5	chr6:31276105-31276155	MCF-7	breast:	n/a
6	chr6:31239910-31239960	CMK	blood:	n/a
7	chr6:31238788-31238838	Caco-2	colon:	n/a
8	chr6:31275881-31275931	HCPEpiC	choroid plexus:	n/a
9	chr6:31240045-31240095	HMEC	breast:	n/a
10	chr6:31276187-31276237	RPTEC	kidney:	n/a
11	chr6:31276434-31276484	HCF	heart:	n/a
12	chr6:31239266-31239316	GM12892	blood:	n/a
13	chr6:31276797-31276847	PrEC	prostate:	n/a
14	chr6:31239247-31239297	AG09319	gingival:	n/a
15	chr6:31238751-31238801	AG09309	skin:	n/a
16	chr6:31276105-31276155	MCF-7	breast:	n/a
17	chr6:31239910-31239960	CMK	blood:	n/a
18	chr6:31238788-31238838	Caco-2	colon:	n/a
19	chr6:31275881-31275931	HCPEpiC	choroid plexus:	n/a
20	chr6:31240045-31240095	HMEC	breast:	n/a
21	chr6:31276187-31276237	RPTEC	kidney:	n/a
22	chr6:31276434-31276484	HCF	heart:	n/a
23	chr6:31240651-31240701	K562	blood:	n/a
24	chr6:31239324-31239374	SK-N-SH_RA	brain:	n/a
25	chr6:31240814-31240864	SKMC	muscle:	n/a
26	chr6:31276667-31276717	HIPEpiC	eye:	n/a
27	chr6:31250765-31250815	ProgFib	skin:	n/a
28	chr6:31276187-31276237	GM19239	blood:	n/a
29	chr6:31239243-31239293	SKMC	muscle:	n/a
30	chr6:31237029-31237079	IMR90	lung:	fetal
31	chr6:31240047-31240097	HCPEpiC	choroid plexus:	n/a
32	chr6:31242584-31242634	NB4	blood:	n/a
33	chr6:31237034-31237084	SKMC	muscle:	n/a
34	chr6:31239767-31239817	PANC-1	pancreas:	n/a
35	chr6:31239295-31239345	HIPEpiC	eye:	n/a
36	chr6:31237405-31237455	GM12878	blood:	n/a
37	chr6:31275767-31275817	HRPEpiC	eye:	n/a
38	chr6:31251137-31251187	HCF	heart:	n/a
39	chr6:31275551-31275601	SK-N-SH	brain:	n/a
40	chr6:31239175-31239225	HIPEpiC	eye:	n/a
41	chr6:31239259-31239309	ProgFib	skin:	n/a
42	chr6:31238388-31238438	SAEC	small airway:	n/a
43	chr6:31275718-31275768	MCF-7	breast:	n/a
44	chr6:31207788-31207838	PrEC	prostate:	n/a
45	chr6:31276418-31276468	NHDF-neo	bronchial:	n/a
46	chr6:31276667-31276717	HRPEpiC	eye:	n/a
47	chr6:31238036-31238086	ovcar-3	ovarian:	n/a
48	chr6:31275881-31275931	H1-hESC	embryonic stem cell:	embryo
49	chr6:31276418-31276468	RPTEC	kidney:	n/a
50	chr6:31239295-31239345	AG09309	skin:	n/a

(count:39 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31164078..31166363-chr6:31260745..31263696,2	K562	blood:
2	chr6:31238976..31240351-chr6:31324393..31325523,6	HCT-116	colon:
3	chr6:31274011..31276374-chr6:31277383..31280033,2	K562	blood:
4	chr6:31260192..31262611-chr6:31284045..31286889,2	K562	blood:
5	chr6:31164078..31167331-chr6:31260118..31263696,3	K562	blood:
6	chr6:31282655..31287685-chr6:31288202..31290762,5	K562	blood:
7	chr6:31279746..31282778-chr6:31284004..31286802,3	K562	blood:
8	chr6:31274576..31277552-chr6:31281409..31285159,3	MCF-7	breast:
9	chr6:31260319..31263250-chr6:31266330..31267976,2	K562	blood:
10	chr6:31273049..31275255-chr6:31283813..31285352,2	MCF-7	breast:
11	chr6:29855138..29856405-chr6:31238835..31239948,4	HCT-116	colon:
12	chr6:31209841..31212396-chr6:31219604..31221505,2	K562	blood:
13	chr6:31260315..31262066-chr6:31270612..31272546,2	MCF-7	breast:
14	chr6:31176797..31178729-chr6:31234671..31236847,2	K562	blood:
15	chr6:31238404..31240559-chr6:31321762..31324439,3	MCF-7	breast:
16	chr6:31262379..31263887-chr6:31264452..31266692,2	MCF-7	breast:
17	chr6:31209841..31212396-chr6:31219604..31221505,2	K562	blood:
18	chr6:31274551..31276643-chr6:31277971..31279738,2	MCF-7	breast:
19	chr6:31187490..31190169-chr6:31217260..31219687,2	K562	blood:
20	chr6:31235298..31236799-chr6:31321704..31323597,2	K562	blood:
21	chr6:31208671..31211485-chr6:31212417..31214896,3	MCF-7	breast:
22	chr6:31273049..31275255-chr6:31283813..31285352,2	MCF-7	breast:
23	chr6:31234807..31237311-chr6:31237898..31240961,3	K562	blood:
24	chr6:31233619..31236964-chr6:31319655..31321766,4	MCF-7	breast:
25	chr6:31260192..31262611-chr6:31284045..31286889,2	K562	blood:
26	chr6:31260315..31262066-chr6:31270612..31272546,2	MCF-7	breast:
27	chr6:31129596..31132185-chr6:31285768..31288675,2	MCF-7	breast:
28	chr6:31251382..31252914-chr6:31343854..31345706,2	MCF-7	breast:
29	chr6:31272067..31274682-chr6:31275532..31277366,2	MCF-7	breast:
30	chr6:31283440..31285991-chr6:31367270..31369843,2	K562	blood:
31	chr6:31260319..31263250-chr6:31266330..31267976,2	K562	blood:
32	chr6:31256122..31258941-chr6:31260246..31262615,2	MCF-7	breast:
33	chr6:31232397..31234509-chr6:31319658..31321454,2	MCF-7	breast:
34	chr6:31262379..31263887-chr6:31264452..31266692,2	MCF-7	breast:
35	chr6:31208671..31211485-chr6:31212417..31214896,3	MCF-7	breast:
36	chr6:31272998..31275186-chr6:31333057..31335314,2	K562	blood:
37	chr6:31279746..31282778-chr6:31284004..31286802,3	K562	blood:
38	chr6:29910138..29911769-chr6:31239456..31240978,2	MCF-7	breast:
39	chr6:31251033..31253649-chr6:31335443..31337577,2	MCF-7	breast:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HLA-C-4	chr6:31275592-31275824	NONHSAT108751
2	lnc-HLA-C-2	chr6:31237115-31237443	NONHSAT108746
3	lnc-HLA-C-2	chr6:31236531-31236950	NONHSAT108747
4	lnc-HLA-C-3	chr6:31253395-31253655	NONHSAT108749
5	lnc-HLA-C-1	chr6:31262721-31262790	ENSG00000256166
6	lnc-HLA-C-1	chr6:31261992-31262072	ENSG00000256166
7	lnc-HLA-C-1	chr6:31261685-31261898	ENSG00000256166
8	lnc-HLA-C-2	chr6:31236526-31236950	NONHSAT108746
9	lnc-HLA-C-3	chr6:31249994-31250026	NONHSAT108749
10	lnc-HLA-C-4	chr6:31276254-31276326	NONHSAT108751
11	lnc-HLA-C-3	chr6:31249491-31249789	NONHSAT108749
12	lnc-HLA-C-1	chr6:31269249-31269419	ENSG00000256166

No data

Variant related genes	Relation type
ENSG00000229836	TF binding region
RPL3P2	TF binding region
HLA-C	TF binding region
USP8P1	TF binding region
WASF5P	TF binding region
ENSG00000256166	TF binding region
ENSG00000229836	CpG island
RPL3P2	CpG island
HLA-C	CpG island
USP8P1	CpG island
WASF5P	CpG island
ENSG00000256166	CpG island
ENSG00000229836	chromatin interactions
ENSG00000234745	chromatin interactions
ENSG00000204525	chromatin interactions
ENSG00000271581	chromatin interactions
ENSG00000227766	chromatin interactions
ENSG00000206344	chromatin interactions
ENSG00000272501	chromatin interactions
ENSG00000206337	chromatin interactions
ENSG00000206503	chromatin interactions
ENSG00000206341	chromatin interactions
ENSG00000231402	chromatin interactions
ENSG00000228432	chromatin interactions
ENSG00000230521	chromatin interactions
ENSG00000230994	chromatin interactions

Extended variants
information (count: 3558 )
Associated
traits (count: 123 )

Variant overlapped rSNPs/rCNVs (count:3558 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376882774	chr6:31206423-31206424	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs565776936	chr6:31206426-31206427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs72863883	chr6:31206445-31206446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs140877286	chr6:31206492-31206493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs201290245	chr6:31206518-31206519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs548315989	chr6:31206558-31206559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs569784076	chr6:31206578-31206579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs536870645	chr6:31206611-31206612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs3130531	chr6:31206616-31206617	Weak transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
10	rs553962202	chr6:31206637-31206638	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs192926397	chr6:31206672-31206673	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs150195378	chr6:31206681-31206682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs114070457	chr6:31206695-31206696	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs574584683	chr6:31206696-31206697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs541883607	chr6:31206700-31206701	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs542816692	chr6:31206701-31206702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs557180303	chr6:31206715-31206716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs2394893	chr6:31206719-31206720	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs546097359	chr6:31206739-31206740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs28397296	chr6:31206747-31206748	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
21	rs138695659	chr6:31206752-31206753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs73728438	chr6:31206768-31206769	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs559350647	chr6:31206780-31206781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs529715527	chr6:31206798-31206799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs567808310	chr6:31206811-31206812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs3134768	chr6:31206844-31206845	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs142057843	chr6:31206849-31206850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs184552222	chr6:31206851-31206852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs370938899	chr6:31206859-31206860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs375358672	chr6:31206863-31206864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs2894186	chr6:31206868-31206869	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs113718789	chr6:31206873-31206874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs570720069	chr6:31206896-31206897	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs534642800	chr6:31206917-31206918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs62399818	chr6:31206918-31206919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs2394894	chr6:31206920-31206921	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs28397297	chr6:31206948-31206949	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs143008131	chr6:31206971-31206972	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs114409607	chr6:31206976-31206977	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs2394895	chr6:31206979-31206980	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
41	rs546183677	chr6:31207015-31207016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs562838979	chr6:31207016-31207017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs188365383	chr6:31207031-31207032	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs573484729	chr6:31207035-31207036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs554201072	chr6:31207036-31207037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs144334674	chr6:31207046-31207047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs191280746	chr6:31207056-31207057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs574448753	chr6:31207077-31207078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs116005732	chr6:31207101-31207102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs576513864	chr6:31207102-31207103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:123)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Breast cancer	21364760	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1051 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31202600-31213600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:31209200-31209400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:31210600-31211400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
4	chr6:31210800-31211400	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr6:31210800-31211600	Enhancers	Primary T helper cells PMA-I stimulated	--
6	chr6:31210800-31211600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:31211000-31211600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr6:31211000-31211600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
9	chr6:31211000-31211600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr6:31211000-31211600	Enhancers	NHEK	skin
11	chr6:31211200-31211400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr6:31211200-31211400	Enhancers	Hela-S3	cervix
13	chr6:31211200-31211400	Enhancers	HMEC	breast
14	chr6:31211200-31211400	Bivalent Enhancer	NHDF-Ad	bronchial
15	chr6:31211200-31211600	Enhancers	Primary hematopoietic stem cells	blood
16	chr6:31211200-31211600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr6:31211200-31211600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr6:31211400-31213200	Weak transcription	HMEC	breast
19	chr6:31211400-31213600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr6:31211600-31212400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
21	chr6:31211600-31213000	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr6:31211600-31213000	Weak transcription	NHEK	skin
23	chr6:31211600-31213200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr6:31211600-31213200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr6:31211600-31213200	Weak transcription	Hela-S3	cervix
26	chr6:31211600-31213400	Weak transcription	Primary hematopoietic stem cells	blood
27	chr6:31211600-31213400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr6:31211600-31213600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr6:31211600-31213600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr6:31212000-31213400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr6:31213000-31214400	Enhancers	NHEK	skin
32	chr6:31213200-31213400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
33	chr6:31213200-31213400	Enhancers	Primary T helper cells PMA-I stimulated	--
34	chr6:31213200-31213400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr6:31213200-31213800	Enhancers	Hela-S3	cervix
36	chr6:31213200-31214000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr6:31213200-31214600	Enhancers	HMEC	breast
38	chr6:31213400-31213600	Enhancers	Primary hematopoietic stem cells	blood
39	chr6:31213400-31213600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr6:31213400-31214400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr6:31213400-31214400	Enhancers	Muscle Satellite Cultured Cells	--
42	chr6:31213400-31214400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr6:31213400-31214400	Enhancers	NHDF-Ad	bronchial
44	chr6:31213600-31214000	Enhancers	iPS-20b Cell Line	embryonic stem cell
45	chr6:31213600-31214000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
46	chr6:31213600-31214000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr6:31213600-31214000	Enhancers	Pancreas	Pancrea
48	chr6:31213600-31214200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr6:31213600-31214400	Enhancers	H1 Cell Line	embryonic stem cell
50	chr6:31213600-31214400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links