Variant report

Variant	esv8754
Chromosome Location	chr9:110432690-110433323
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:47 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs191475268	chr9:110432705-110432706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs12235793	chr9:110432715-110432716	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs183990690	chr9:110432717-110432718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs377304901	chr9:110432718-110432719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs187256278	chr9:110432757-110432758	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs544583696	chr9:110432786-110432787	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs191886653	chr9:110432805-110432806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs115758599	chr9:110432831-110432832	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs147377960	chr9:110432850-110432851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs370704207	chr9:110432876-110432877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs35867291	chr9:110432880-110432881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs373932307	chr9:110432887-110432888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs12235815	chr9:110432892-110432893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs13300194	chr9:110432894-110432895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs13300196	chr9:110432901-110432902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs57184779	chr9:110432903-110432904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs57465650	chr9:110432908-110432909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs561331897	chr9:110432912-110432913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs12000409	chr9:110432917-110432918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs71370245	chr9:110432923-110432924	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs12006144	chr9:110432928-110432929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs12006174	chr9:110432937-110432938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs12006146	chr9:110432938-110432939	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs12006147	chr9:110432944-110432945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs571745215	chr9:110432951-110432952	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs12006175	chr9:110432954-110432955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs377344810	chr9:110432958-110432959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs370720000	chr9:110432967-110432968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs59180432	chr9:110432968-110432969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs57728682	chr9:110432974-110432975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs59669253	chr9:110432984-110432985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs61010434	chr9:110432985-110432986	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs532582563	chr9:110433008-110433009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs551009141	chr9:110433009-110433010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs192457291	chr9:110433043-110433044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs370720009	chr9:110433055-110433056	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs377031692	chr9:110433063-110433064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs569244409	chr9:110433066-110433067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs57228638	chr9:110433079-110433080	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs61133901	chr9:110433081-110433082	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs537348533	chr9:110433101-110433102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs3983583	chr9:110433134-110433135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs538388501	chr9:110433209-110433210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs555597483	chr9:110433250-110433251	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs80289156	chr9:110433261-110433262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs534816171	chr9:110433295-110433296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs118151730	chr9:110433297-110433298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Fukuyama congenital muscular dystrophy	21572526	CNVD
Testicular germ cell tumor	18059402	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Barrett''s adenocarcinoma	18663352	CNVD

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110413000-110437000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:110426000-110435600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr9:110430400-110435800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr9:110430600-110436200	Weak transcription	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links