Variant report

Variant	esv8805
Chromosome Location	chr12:11166558-11222811
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:338)
CpG islands
(count:671)
Chromatin interactive
region (count:4)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:338 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:11176072-11176303	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:11168444-11168649	HepG2	liver:	n/a	n/a
3	BATF	chr12:11216721-11217010	GM12878	blood:	n/a	n/a
4	BATF	chr12:11186631-11186911	GM12878	blood:	n/a	n/a
5	BATF	chr12:11186566-11186883	GM12878	blood:	n/a	n/a
6	BCL11A	chr12:11186584-11186913	GM12878	blood:	n/a	n/a
7	BHLHE40	chr12:11168360-11168714	HepG2	liver:	n/a	n/a
8	BRCA1	chr12:11168480-11168660	HepG2	liver:	n/a	n/a
9	CEBPB	chr12:11170024-11170162	HepG2	liver:	n/a	chr12:11170139-11170150
10	CEBPB	chr12:11167458-11167736	HepG2	liver:	n/a	chr12:11167582-11167593
11	CEBPB	chr12:11222658-11222813	HepG2	liver:	n/a	n/a
12	CTCF	chr12:11178862-11178967	Hela-S3	cervix:	n/a	n/a
13	CTCF	chr12:11178820-11178970	GM12866	blood:	n/a	n/a
14	CTCF	chr12:11178795-11179005	H1-hESC	embryonic stem cell:	n/a	n/a
15	CTCF	chr12:11178880-11179030	GM12873	blood:	n/a	n/a
16	CTCF	chr12:11209740-11209890	HepG2	liver:	n/a	n/a
17	CTCF	chr12:11207523-11207552	GM10248	blood:	n/a	n/a
18	CTCF	chr12:11178820-11178970	HepG2	liver:	n/a	n/a
19	CTCF	chr12:11178780-11178930	WI-38	lung:	n/a	n/a
20	CTCF	chr12:11178880-11179030	AoAF	blood vessel:	n/a	n/a
21	CTCF	chr12:11178900-11179050	BJ	skin:	n/a	n/a
22	CTCF	chr12:11178800-11178950	HFF-Myc	foreskin:	n/a	n/a
23	CTCF	chr12:11178800-11178950	GM12874	blood:	n/a	n/a
24	CTCF	chr12:11178831-11178990	Gliobla	brain:	n/a	n/a
25	CTCF	chr12:11178780-11178930	RPTEC	kidney:	n/a	n/a
26	CTCF	chr12:11178880-11179030	HEK293	kidney:	n/a	n/a
27	CTCF	chr12:11178840-11178990	HUVEC	blood vessel:	n/a	n/a
28	CTCF	chr12:11178690-11179157	MCF-7	breast:	n/a	n/a
29	CTCF	chr12:11178840-11178990	GM12873	blood:	n/a	n/a
30	CTCF	chr12:11178806-11179001	K562	blood:	n/a	n/a
31	CTCF	chr12:11178820-11178970	HA-sp	spinal cord:	n/a	n/a
32	CTCF	chr12:11178840-11178990	GM12872	blood:	n/a	n/a
33	CTCF	chr12:11178800-11178950	HFF	foreskin:	n/a	n/a
34	CTCF	chr12:11178800-11178950	HBMEC	blood vessel:	n/a	n/a
35	CTCF	chr12:11178720-11178870	NHDF-neo	bronchial:	n/a	n/a
36	CTCF	chr12:11178840-11178990	Hela-S3	cervix:	n/a	n/a
37	CTCF	chr12:11209872-11209908	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr12:11187719-11187757	GM13976	blood:	n/a	n/a
39	CTCF	chr12:11178880-11179030	A549	lung:	n/a	n/a
40	CTCF	chr12:11183077-11183136	GM10248	blood:	n/a	n/a
41	CTCF	chr12:11209880-11210030	GM12872	blood:	n/a	n/a
42	CTCF	chr12:11178820-11178970	MCF-7	breast:	n/a	n/a
43	CTCF	chr12:11169160-11169310	HEK293	kidney:	n/a	n/a
44	CTCF	chr12:11178700-11178850	HCM	heart:	n/a	n/a
45	CTCF	chr12:11178779-11179099	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr12:11178760-11178910	GM12869	blood:	n/a	n/a
47	CTCF	chr12:11178880-11179030	GM12864	blood:	n/a	n/a
48	CTCF	chr12:11178792-11179011	MCF-7	breast:	n/a	n/a
49	CTCF	chr12:11178840-11178990	HepG2	liver:	n/a	n/a
50	CTCF	chr12:11178720-11178870	RPTEC	kidney:	n/a	n/a

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:11176386-11176436	ECC-1	luminal epithelium:	n/a
2	chr12:11215083-11215133	HAEpiC	amniotic membrane:	n/a
3	chr12:11185058-11185108	GM12891	blood:	n/a
4	chr12:11184037-11184087	HMEC	breast:	n/a
5	chr12:11176574-11176624	RPTEC	kidney:	n/a
6	chr12:11184347-11184397	PFSK-1	brain:	n/a
7	chr12:11215083-11215133	GM12892	blood:	n/a
8	chr12:11215083-11215133	HIPEpiC	eye:	n/a
9	chr12:11176574-11176624	ECC-1	luminal epithelium:	n/a
10	chr12:11216351-11216401	Hepatocyte	liver:	n/a
11	chr12:11184415-11184465	AG09319	gingival:	n/a
12	chr12:11176574-11176624	HCM	heart:	n/a
13	chr12:11176386-11176436	Hela-S3	cervix:	n/a
14	chr12:11216351-11216401	T-47D	breast:	n/a
15	chr12:11185058-11185108	HAEpiC	amniotic membrane:	n/a
16	chr12:11215083-11215133	SK-N-SH	brain:	n/a
17	chr12:11215083-11215133	MCF-7	breast:	n/a
18	chr12:11184149-11184199	HEK293	kidney:	embryo
19	chr12:11176574-11176624	HepG2	liver:	n/a
20	chr12:11176574-11176624	Hepatocyte	liver:	n/a
21	chr12:11216351-11216401	SK-N-SH_RA	brain:	n/a
22	chr12:11174898-11174948	Hela-S3	cervix:	n/a
23	chr12:11184005-11184055	NB4	blood:	n/a
24	chr12:11216351-11216401	PFSK-1	brain:	n/a
25	chr12:11184415-11184465	HRPEpiC	eye:	n/a
26	chr12:11176574-11176624	NB4	blood:	n/a
27	chr12:11184415-11184465	AG10803	skin:	n/a
28	chr12:11176574-11176624	Jurkat	blood:	n/a
29	chr12:11184149-11184199	SKMC	muscle:	n/a
30	chr12:11184005-11184055	HCPEpiC	choroid plexus:	n/a
31	chr12:11185058-11185108	RPTEC	kidney:	n/a
32	chr12:11174898-11174948	SK-N-SH_RA	brain:	n/a
33	chr12:11184005-11184055	RPTEC	kidney:	n/a
34	chr12:11215083-11215133	HCM	heart:	n/a
35	chr12:11176574-11176624	SK-N-MC	brain:	n/a
36	chr12:11215083-11215133	AoSMC	blood vessel:	n/a
37	chr12:11174898-11174948	SK-N-SH	brain:	n/a
38	chr12:11184005-11184055	U87	brain:	n/a
39	chr12:11184149-11184199	HRCEpiC	kidney:	n/a
40	chr12:11184415-11184465	PFSK-1	brain:	n/a
41	chr12:11176386-11176436	BJ	skin:	n/a
42	chr12:11176574-11176624	HMEC	breast:	n/a
43	chr12:11174898-11174948	AG09319	gingival:	n/a
44	chr12:11184005-11184055	NH-A	brain:	n/a
45	chr12:11176386-11176436	HCPEpiC	choroid plexus:	n/a
46	chr12:11176574-11176624	NT2-D1	testis:	n/a
47	chr12:11216351-11216401	PrEC	prostate:	n/a
48	chr12:11185058-11185108	GM06990	blood:	n/a
49	chr12:11215083-11215133	ECC-1	luminal epithelium:	n/a
50	chr12:11216351-11216401	PANC-1	pancreas:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:11210669..11211248-chr5:109800405..109801099,2	MCF-7	breast:
2	chr12:11169301..11171201-chr12:11322573..11325255,2	MCF-7	breast:
3	chr12:11157746..11159406-chr12:11165545..11167423,2	K562	blood:
4	chr12:11009323..11011109-chr12:11168207..11170860,2	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRH1-1	chr12:11187381-11187484	NONHSAT026912
2	lnc-PRH1-1	chr12:11199619-11199713	NONHSAT026914
3	lnc-PRH1-1	chr12:11199619-11199787	NR_037918
4	lnc-PRH1-1	chr12:11187381-11187484	NR_037918
5	lnc-TAS2R46-1	chr12:11200931-11201855	NONHSAT026917
6	lnc-PRH1-1	chr12:11199619-11199640	NONHSAT026908
7	lnc-PRH1-1	chr12:11199619-11199787	NONHSAT026907
8	lnc-PRH1-1	chr12:11199612-11199787	NONHSAT026916
9	lnc-PRH1-1	chr12:11199619-11199787	NONHSAT026912
10	lnc-PRH1-1	chr12:11199619-11199736	NONHSAT026915

No data

Variant related genes	Relation type
TAS2R46	TF binding region
TAS2R19	TF binding region
TAS2R31	TF binding region
ENSG00000268301	TF binding region
PRR4	TF binding region
TAS2R63P	TF binding region
TAS2R46	CpG island
TAS2R19	CpG island
TAS2R31	CpG island
ENSG00000268301	CpG island
PRR4	CpG island
TAS2R63P	CpG island
ENSG00000256712	chromatin interactions
ENSG00000212127	chromatin interactions
ENSG00000111215	chromatin interactions
ENSG00000256537	chromatin interactions

Extended variants
information (count: 3227 )
Associated
traits (count: 97 )

Variant overlapped rSNPs/rCNVs (count:3227 , 50 per page) page: 1 2 3 4 5 6 7 ... 65

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1901189	chr12:11166574-11166575	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs1901190	chr12:11166578-11166579	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
3	rs201419568	chr12:11166581-11166582	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs531382410	chr12:11166589-11166590	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs79136508	chr12:11166591-11166592	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs566487892	chr12:11166706-11166707	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs201624325	chr12:11166716-11166717	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs11054165	chr12:11166735-11166736	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs551387728	chr12:11166753-11166754	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs142794647	chr12:11166812-11166813	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs527297182	chr12:11166824-11166825	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs373522951	chr12:11166839-11166840	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs539716946	chr12:11166842-11166843	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs372146389	chr12:11166854-11166855	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs76637522	chr12:11166875-11166876	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs553546066	chr12:11166897-11166898	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs61912293	chr12:11166911-11166912	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs188742327	chr12:11166921-11166922	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200113212	chr12:11166936-11166937	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs563854473	chr12:11166940-11166941	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs7310849	chr12:11166968-11166969	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs192833466	chr12:11166972-11166973	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs182558618	chr12:11166973-11166974	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs148945610	chr12:11166976-11166977	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs575324500	chr12:11166977-11166978	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs544231178	chr12:11166998-11166999	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs570252989	chr12:11167012-11167013	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs559026235	chr12:11167152-11167153	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs536188084	chr12:11167162-11167163	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs200095249	chr12:11167170-11167171	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs549423115	chr12:11167178-11167179	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs73055714	chr12:11167192-11167193	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs73055715	chr12:11167206-11167207	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs68093605	chr12:11167220-11167221	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs577893380	chr12:11167222-11167223	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs10845289	chr12:11167226-11167227	Enhancers Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs560306454	chr12:11167236-11167237	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs79630510	chr12:11167243-11167244	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs138071152	chr12:11167244-11167245	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs542841496	chr12:11167249-11167250	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs535037740	chr12:11167252-11167253	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs78531511	chr12:11167263-11167264	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs531419113	chr12:11167265-11167266	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs547982743	chr12:11167273-11167274	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs551416733	chr12:11167281-11167282	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs571227638	chr12:11167297-11167298	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs533686603	chr12:11167326-11167327	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs546929106	chr12:11167336-11167337	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs76659338	chr12:11167375-11167376	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs558246187	chr12:11167386-11167387	Enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:97)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Squamous cell cancer	19607727	CNVD
Prostate cancer	16573809	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Acute myeloid leukemia	17237825	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Bipolar disorder	19114987	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD

Chromatin state (count:869 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11114400-11180200	Weak transcription	Primary B cells from peripheral blood	blood
2	chr12:11122000-11170200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr12:11122200-11168000	Weak transcription	HUVEC	blood vessel
4	chr12:11129200-11167600	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr12:11134800-11166800	Weak transcription	NHDF-Ad	bronchial
6	chr12:11136400-11180200	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr12:11136600-11180200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr12:11136600-11196400	Weak transcription	Primary T helper cells PMA-I stimulated	--
9	chr12:11137400-11203000	Weak transcription	Hela-S3	cervix
10	chr12:11143400-11167600	Weak transcription	Fetal Intestine Small	intestine
11	chr12:11143400-11178800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr12:11145400-11177600	Weak transcription	Primary monocytes fromperipheralblood	blood
13	chr12:11146200-11167400	Weak transcription	Fetal Intestine Large	intestine
14	chr12:11147000-11168400	Weak transcription	Liver	Liver
15	chr12:11147000-11178600	Weak transcription	Fetal Stomach	stomach
16	chr12:11147000-11185400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr12:11147200-11168600	Weak transcription	Spleen	Spleen
18	chr12:11147200-11169200	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr12:11147200-11171200	Weak transcription	Primary hematopoietic stem cells	blood
20	chr12:11147200-11176200	Weak transcription	Aorta	Aorta
21	chr12:11147200-11180400	Weak transcription	Pancreas	Pancrea
22	chr12:11148400-11178200	Weak transcription	Dnd41	blood
23	chr12:11149000-11168600	Weak transcription	Left Ventricle	heart
24	chr12:11154000-11169000	Weak transcription	Primary T cells from cord blood	blood
25	chr12:11154200-11167400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr12:11154200-11168000	Weak transcription	Fetal Muscle Leg	muscle
27	chr12:11154200-11174200	Weak transcription	Primary B cells from cord blood	blood
28	chr12:11154200-11178000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr12:11154200-11178200	Weak transcription	A549	lung
30	chr12:11154200-11178800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr12:11154400-11168000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr12:11159400-11168600	Weak transcription	Gastric	stomach
33	chr12:11159400-11182000	Weak transcription	NHEK	skin
34	chr12:11159600-11178200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
35	chr12:11161400-11178200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr12:11161400-11179200	Weak transcription	Fetal Kidney	kidney
37	chr12:11162400-11172800	Weak transcription	Fetal Brain Female	brain
38	chr12:11162600-11167800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr12:11163400-11177600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr12:11163400-11178000	Weak transcription	GM12878-XiMat	blood
41	chr12:11163600-11178800	Weak transcription	Ovary	ovary
42	chr12:11163800-11178000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr12:11164400-11178600	Weak transcription	Fetal Thymus	thymus
44	chr12:11164600-11168200	Weak transcription	Stomach Mucosa	stomach
45	chr12:11164800-11171800	Weak transcription	Lung	lung
46	chr12:11165000-11170000	Weak transcription	Fetal Muscle Trunk	muscle
47	chr12:11165000-11180800	Weak transcription	HSMM	muscle
48	chr12:11165200-11170800	Enhancers	Brain Substantia Nigra	brain
49	chr12:11165400-11167600	Enhancers	Brain Inferior Temporal Lobe	brain
50	chr12:11165400-11180200	Weak transcription	Esophagus	oesophagus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links