Variant report

Variant	esv988069
Chromosome Location	chr6:36942299-36951067
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr6:36948845-36949027	H1-hESC	embryonic stem cell:	n/a	n/a
2	CTCF	chr6:36948840-36948990	GM12875	blood:	n/a	chr6:36948861-36948879 chr6:36948973-36948986
3	CTCF	chr6:36947200-36947350	NHLF	lung:	n/a	n/a
4	CTCF	chr6:36945184-36945490	GM19239	blood:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
5	CTCF	chr6:36947200-36947350	GM12873	blood:	n/a	n/a
6	CTCF	chr6:36947114-36947421	K562	blood:	n/a	n/a
7	CTCF	chr6:36947200-36947350	HL-60	blood:	n/a	n/a
8	CTCF	chr6:36948752-36949042	H1-hESC	embryonic stem cell:	n/a	chr6:36948861-36948879 chr6:36948973-36948986 chr6:36948787-36948795
9	CTCF	chr6:36947180-36947330	HCT-116	colon:	n/a	n/a
10	CTCF	chr6:36947180-36947330	GM12869	blood:	n/a	n/a
11	CTCF	chr6:36945140-36945290	HCM	heart:	n/a	n/a
12	CTCF	chr6:36948820-36948970	HA-sp	spinal cord:	n/a	chr6:36948861-36948879
13	CTCF	chr6:36948800-36948950	HCPEpiC	choroid plexus:	n/a	chr6:36948861-36948879
14	CTCF	chr6:36947236-36947405	GM12878	blood:	n/a	n/a
15	CTCF	chr6:36948760-36948910	RPTEC	kidney:	n/a	chr6:36948861-36948879 chr6:36948787-36948795
16	CTCF	chr6:36947220-36947370	HFF-Myc	foreskin:	n/a	n/a
17	CTCF	chr6:36945217-36945445	A549	lung:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
18	CTCF	chr6:36945280-36945430	GM12864	blood:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
19	CTCF	chr6:36945240-36945390	SK-N-SH_RA	brain:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
20	CTCF	chr6:36948780-36948930	HVMF	connective:	n/a	chr6:36948861-36948879 chr6:36948787-36948795
21	CTCF	chr6:36945200-36945350	SAEC	small airway:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
22	CTCF	chr6:36945240-36945390	GM12873	blood:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
23	CTCF	chr6:36945223-36945373	HUVEC	blood vessel:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
24	CTCF	chr6:36947187-36947395	GM10248	blood:	n/a	n/a
25	CTCF	chr6:36945245-36945344	Kidney_OC	kidney:	n/a	n/a
26	CTCF	chr6:36945240-36945390	Caco-2	colon:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
27	CTCF	chr6:36947200-36947350	BE2_C	brain:	n/a	n/a
28	CTCF	chr6:36948720-36948870	NHDF-neo	bronchial:	n/a	chr6:36948787-36948795
29	CTCF	chr6:36947180-36947330	GM12874	blood:	n/a	n/a
30	CTCF	chr6:36948860-36949010	K562	blood:	n/a	chr6:36948861-36948879 chr6:36948973-36948986
31	CTCF	chr6:36947091-36947463	A549	lung:	n/a	n/a
32	CTCF	chr6:36945240-36945390	AoAF	blood vessel:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
33	CTCF	chr6:36945240-36945410	GM20000	blood:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
34	CTCF	chr6:36945220-36945370	GM12873	blood:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
35	CTCF	chr6:36945220-36945370	GM12868	blood:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
36	CTCF	chr6:36948780-36948930	GM12878	blood:	n/a	chr6:36948861-36948879 chr6:36948787-36948795
37	CTCF	chr6:36945218-36945459	H1-hESC	embryonic stem cell:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
38	CTCF	chr6:36948740-36948890	RPTEC	kidney:	n/a	chr6:36948861-36948879 chr6:36948787-36948795
39	CTCF	chr6:36947220-36947370	A549	lung:	n/a	n/a
40	CTCF	chr6:36948767-36949045	IMR90	lung:	n/a	chr6:36948861-36948879 chr6:36948973-36948986 chr6:36948787-36948795
41	CTCF	chr6:36948740-36948890	HRPEpiC	eye:	n/a	chr6:36948861-36948879 chr6:36948787-36948795
42	CTCF	chr6:36947020-36947418	MCF-7	breast:	n/a	n/a
43	CTCF	chr6:36948700-36948850	HepG2	liver:	n/a	chr6:36948787-36948795
44	CTCF	chr6:36945280-36945430	AG04450	lung:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
45	CTCF	chr6:36947400-36947550	WI-38	lung:	n/a	n/a
46	CTCF	chr6:36945024-36945524	K562	blood:	n/a	chr6:36945089-36945102 chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945333-36945354 chr6:36945082-36945095 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347
47	CTCF	chr6:36948820-36948901	GM19240	blood:	n/a	chr6:36948861-36948879
48	CTCF	chr6:36947160-36947310	GM12866	blood:	n/a	n/a
49	CTCF	chr6:36948760-36948910	GM06990	blood:	n/a	chr6:36948861-36948879 chr6:36948787-36948795
50	CTCF	chr6:36945200-36945350	HFF-Myc	foreskin:	n/a	chr6:36945336-36945346 chr6:36945332-36945348 chr6:36945331-36945349 chr6:36945334-36945347 chr6:36945334-36945347

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:36947277-36947327	HCT-116	colon:	n/a
2	chr6:36948816-36948866	HIPEpiC	eye:	n/a
3	chr6:36947277-36947327	PANC-1	pancreas:	n/a
4	chr6:36948816-36948866	GM19239	blood:	n/a
5	chr6:36948816-36948866	HPAEpiC	pulmonary alveolar:	n/a
6	chr6:36947277-36947327	HCPEpiC	choroid plexus:	n/a
7	chr6:36947277-36947327	AG04449	skin:	fetal
8	chr6:36948816-36948866	K562	blood:	n/a
9	chr6:36947277-36947327	BE2_C	brain:	n/a
10	chr6:36947277-36947327	HRPEpiC	eye:	n/a
11	chr6:36948816-36948866	ECC-1	luminal epithelium:	n/a
12	chr6:36947277-36947327	PFSK-1	brain:	n/a
13	chr6:36948816-36948866	PFSK-1	brain:	n/a
14	chr6:36947277-36947327	ECC-1	luminal epithelium:	n/a
15	chr6:36948816-36948866	SAEC	small airway:	n/a
16	chr6:36948816-36948866	Hepatocyte	liver:	n/a
17	chr6:36948816-36948866	RPTEC	kidney:	n/a
18	chr6:36948816-36948866	T-47D	breast:	n/a
19	chr6:36947277-36947327	Caco-2	colon:	n/a
20	chr6:36947277-36947327	U87	brain:	n/a
21	chr6:36948816-36948866	NT2-D1	testis:	n/a
22	chr6:36947277-36947327	K562	blood:	n/a
23	chr6:36948816-36948866	HCPEpiC	choroid plexus:	n/a
24	chr6:36947277-36947327	HCM	heart:	n/a
25	chr6:36947277-36947327	BJ	skin:	n/a
26	chr6:36947277-36947327	ProgFib	skin:	n/a
27	chr6:36947277-36947327	NHBE	bronchial:	n/a
28	chr6:36947277-36947327	GM12892	blood:	n/a
29	chr6:36947277-36947327	HCF	heart:	n/a
30	chr6:36948816-36948866	Hela-S3	cervix:	n/a
31	chr6:36947277-36947327	ovcar-3	ovarian:	n/a
32	chr6:36948816-36948866	HEEpiC	esophagus:	n/a
33	chr6:36948816-36948866	AoSMC	blood vessel:	n/a
34	chr6:36947277-36947327	T-47D	breast:	n/a
35	chr6:36948816-36948866	NHBE	bronchial:	n/a
36	chr6:36947277-36947327	LNCaP	prostate:	n/a
37	chr6:36947277-36947327	A549	lung:	n/a
38	chr6:36947277-36947327	HIPEpiC	eye:	n/a
39	chr6:36948816-36948866	HAEpiC	amniotic membrane:	n/a
40	chr6:36947277-36947327	AoSMC	blood vessel:	n/a
41	chr6:36948816-36948866	PrEC	prostate:	n/a
42	chr6:36948816-36948866	CMK	blood:	n/a
43	chr6:36947277-36947327	Jurkat	blood:	n/a
44	chr6:36948816-36948866	NB4	blood:	n/a
45	chr6:36948816-36948866	BJ	skin:	n/a
46	chr6:36948816-36948866	GM12892	blood:	n/a
47	chr6:36947277-36947327	SAEC	small airway:	n/a
48	chr6:36948816-36948866	SK-N-SH	brain:	n/a
49	chr6:36948816-36948866	HEK293	kidney:	embryo
50	chr6:36948816-36948866	HepG2	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:36943380..36943959-chr6:36986086..36986598,2	MCF-7	breast:
2	chr6:36930754..36936310-chr6:36950773..36956274,7	MCF-7	breast:
3	chr6:36939940..36941614-chr6:36949156..36950933,2	MCF-7	breast:
4	chr6:36646638..36649501-chr6:36950264..36953112,2	MCF-7	breast:
5	chr6:36941974..36945038-chr6:36952808..36956933,4	MCF-7	breast:
6	chr6:36948207..36949609-chr6:36985741..36986646,4	MCF-7	breast:
7	chr6:36859467..36861214-chr6:36946657..36948783,2	MCF-7	breast:
8	chr6:36733989..36734544-chr6:36946725..36947333,2	MCF-7	breast:
9	chr6:36881755..36882648-chr6:36946922..36947744,2	MCF-7	breast:
10	chr6:36925903..36928788-chr6:36946034..36948612,2	MCF-7	breast:
11	chr6:36937337..36939324-chr6:36946513..36949209,3	MCF-7	breast:
12	chr6:36938832..36941814-chr6:36942476..36945654,4	MCF-7	breast:
13	chr6:36947258..36950041-chr6:36986048..36987573,2	MCF-7	breast:
14	chr6:36949522..36951437-chr6:36961267..36963379,2	K562	blood:
15	chr6:36944786..36946944-chr6:36988246..36989759,2	MCF-7	breast:
16	chr6:36937337..36939387-chr6:36947202..36951298,3	MCF-7	breast:
17	chr6:36950922..36953739-chr6:37176914..37178749,2	MCF-7	breast:
18	chr6:36942964..36945268-chr6:37137836..37139724,2	K562	blood:
19	chr6:36949230..36952224-chr6:37136925..37139369,2	K562	blood:
20	chr6:36853647..36856578-chr6:36948651..36952350,3	K562	blood:
21	chr6:36882074..36882765-chr6:36946753..36947291,2	MCF-7	breast:
22	chr6:36855815..36857675-chr6:36943714..36945345,2	K562	blood:

Variant related genes	Relation type
MTCH1	TF binding region
MTCH1	CpG island
ENSG00000137409	chromatin interactions
ENSG00000137193	chromatin interactions
ENSG00000164530	chromatin interactions
ENSG00000146192	chromatin interactions

Extended variants
information (count: 395 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:395 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs151302521	chr6:36942301-36942302	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs544376082	chr6:36942310-36942311	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs181852023	chr6:36942360-36942361	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs578203918	chr6:36942404-36942405	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs748406	chr6:36942417-36942418	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs111872926	chr6:36942426-36942427	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs560737582	chr6:36942454-36942455	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs113791458	chr6:36942464-36942465	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs114720216	chr6:36942472-36942473	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs386700217	chr6:36942481-36942482	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs80294140	chr6:36942482-36942483	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs733461	chr6:36942483-36942484	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs146647192	chr6:36942493-36942494	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs141197178	chr6:36942564-36942565	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs545820977	chr6:36942653-36942654	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs532539141	chr6:36942663-36942664	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs112003093	chr6:36942669-36942670	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs150199143	chr6:36942673-36942674	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs111601872	chr6:36942716-36942717	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs575974424	chr6:36942724-36942725	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs748408	chr6:36942746-36942747	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs530897451	chr6:36942763-36942764	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs535364278	chr6:36942777-36942778	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs555681551	chr6:36942813-36942814	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs189735364	chr6:36942818-36942819	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs117122969	chr6:36942877-36942878	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs745506	chr6:36942928-36942929	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs138770357	chr6:36942933-36942934	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs540793716	chr6:36942961-36942962	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs745505	chr6:36942979-36942980	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs3997729	chr6:36943016-36943017	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs745504	chr6:36943040-36943041	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs542951363	chr6:36943073-36943074	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs563238682	chr6:36943103-36943104	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs182073187	chr6:36943124-36943125	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs544223982	chr6:36943157-36943158	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs563999346	chr6:36943165-36943166	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs4636007	chr6:36943171-36943172	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs532871417	chr6:36943184-36943185	Strong transcription Weak transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs188042872	chr6:36943212-36943213	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs559912815	chr6:36943237-36943238	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs2293384	chr6:36943262-36943263	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs191316094	chr6:36943284-36943285	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs548988299	chr6:36943297-36943298	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs369033339	chr6:36943346-36943347	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs148957702	chr6:36943370-36943371	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs537820523	chr6:36943396-36943397	Strong transcription Weak transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs372986933	chr6:36943401-36943402	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs374210762	chr6:36943410-36943411	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs200342013	chr6:36943413-36943414	Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Lung cancer	19153074	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	21693616	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Breast cancer	16397240	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Osteosarcoma	21197465	CNVD
Gastric cancer	24379144	CNVD
Neuroblastoma	18923191	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:597 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:36931800-36948600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:36932400-36946800	Strong transcription	Fetal Brain Female	brain
3	chr6:36932400-36951800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr6:36932800-36947400	Strong transcription	Fetal Stomach	stomach
5	chr6:36933800-36946800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:36933800-36946800	Strong transcription	Brain Anterior Caudate	brain
7	chr6:36933800-36947200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:36934000-36946600	Strong transcription	Thymus	Thymus
9	chr6:36934000-36946800	Strong transcription	Primary T cells from cord blood	blood
10	chr6:36934000-36946800	Strong transcription	Primary T cells fromperipheralblood	blood
11	chr6:36934000-36946800	Strong transcription	Colon Smooth Muscle	Colon
12	chr6:36934000-36949600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
13	chr6:36934000-36951600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr6:36934200-36946600	Strong transcription	Duodenum Smooth Muscle	Duodenum
15	chr6:36934200-36946600	Strong transcription	NHDF-Ad	bronchial
16	chr6:36934200-36946800	Strong transcription	Brain Germinal Matrix	brain
17	chr6:36934200-36947000	Strong transcription	Osteobl	bone
18	chr6:36934200-36947200	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr6:36934200-36947400	Strong transcription	Cortex derived primary cultured neurospheres	brain
20	chr6:36934200-36949200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
21	chr6:36934200-36950400	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr6:36934400-36943000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr6:36934400-36946000	Strong transcription	Primary B cells from cord blood	blood
24	chr6:36934400-36946400	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr6:36934400-36946600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr6:36934400-36946600	Strong transcription	Aorta	Aorta
27	chr6:36934400-36946600	Strong transcription	Brain Cingulate Gyrus	brain
28	chr6:36934400-36946600	Strong transcription	Colonic Mucosa	Colon
29	chr6:36934400-36947200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr6:36934400-36947200	Strong transcription	NHLF	lung
31	chr6:36934400-36947400	Strong transcription	Primary B cells from peripheral blood	blood
32	chr6:36934400-36947800	Strong transcription	Dnd41	blood
33	chr6:36934400-36949200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
34	chr6:36934600-36947200	Strong transcription	Sigmoid Colon	Sigmoid Colon
35	chr6:36934600-36947400	Strong transcription	NH-A	brain
36	chr6:36934600-36947600	Strong transcription	Rectal Mucosa Donor 29	rectum
37	chr6:36934600-36949200	Strong transcription	Placenta	Placenta
38	chr6:36934800-36945400	Strong transcription	Brain Angular Gyrus	brain
39	chr6:36934800-36946800	Strong transcription	HUES48 Cell Line	embryonic stem cell
40	chr6:36934800-36947000	Strong transcription	Liver	Liver
41	chr6:36934800-36949600	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr6:36935000-36943000	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
43	chr6:36935000-36946200	Strong transcription	Fetal Lung	lung
44	chr6:36935000-36946400	Strong transcription	HSMMtube	muscle
45	chr6:36935000-36946600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
46	chr6:36935000-36946600	Strong transcription	Pancreas	Pancrea
47	chr6:36935000-36946600	Strong transcription	Rectal Smooth Muscle	rectum
48	chr6:36935000-36946600	Strong transcription	HUVEC	blood vessel
49	chr6:36935000-36946800	Strong transcription	H1 Cell Line	embryonic stem cell
50	chr6:36935000-36947000	Strong transcription	Primary T helper naive cells fromperipheralblood	blood

The 2.0 version of rSNPBase

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