Variant report

Variant	esv990306
Chromosome Location	chr11:24736631-24739237
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 89 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:89 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs116495032	chr11:24736640-24736641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs560606664	chr11:24736642-24736643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs532648926	chr11:24736654-24736655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs10834446	chr11:24736656-24736657	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs56680192	chr11:24736709-24736710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs113212913	chr11:24736710-24736711	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs71311279	chr11:24736718-24736719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs569082099	chr11:24736755-24736756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs553180991	chr11:24736781-24736782	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs531498188	chr11:24736794-24736795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs140195518	chr11:24736802-24736803	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs11028114	chr11:24736803-24736804	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs548418144	chr11:24736810-24736811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs61539979	chr11:24736845-24736846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs372996978	chr11:24736849-24736850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs58368050	chr11:24736852-24736853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs12363557	chr11:24736854-24736855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs369785781	chr11:24736857-24736858	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs533587153	chr11:24736859-24736860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs553720869	chr11:24736910-24736911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs570261652	chr11:24736930-24736931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs77213647	chr11:24736976-24736977	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs150837420	chr11:24736991-24736992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs191953731	chr11:24737009-24737010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs559326216	chr11:24737019-24737020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs184413405	chr11:24737036-24737037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs544767494	chr11:24737051-24737052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs554996083	chr11:24737096-24737097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs575064240	chr11:24737117-24737118	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs540312904	chr11:24737157-24737158	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs560490979	chr11:24737161-24737162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs186846145	chr11:24737171-24737172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs368205609	chr11:24737175-24737176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs201047379	chr11:24737177-24737178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs557323725	chr11:24737223-24737224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs150012267	chr11:24737243-24737244	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs79800211	chr11:24737283-24737284	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs548349679	chr11:24737285-24737286	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs568305853	chr11:24737339-24737340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs145229458	chr11:24737345-24737346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs377013977	chr11:24737350-24737351	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs547245265	chr11:24737371-24737372	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs570123932	chr11:24737386-24737387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs116018879	chr11:24737406-24737407	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs10834447	chr11:24737422-24737423	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs191732523	chr11:24737424-24737425	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs139690274	chr11:24737460-24737461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs145261345	chr11:24737508-24737509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs34391359	chr11:24737529-24737530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs11028115	chr11:24737560-24737561	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Myelofibrosis	22110671	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:24736400-24737800	Weak transcription	Liver	Liver
2	chr11:24737800-24738400	Enhancers	Liver	Liver

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