The 2.0 version of rSNPBase

Variant report

Variant esv991425
Chromosome Location chr6:5245343-5245365
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5206200-5246800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr6:5208200-5259800 Weak transcription Primary B cells from peripheral blood blood
3 chr6:5214600-5248800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:5214800-5248800 Weak transcription A549 lung
5 chr6:5215000-5252600 Weak transcription Stomach Smooth Muscle stomach
6 chr6:5215000-5257400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:5215000-5259800 Weak transcription Primary T cells fromperipheralblood blood
8 chr6:5215400-5259800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr6:5215600-5251600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:5215600-5254600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr6:5215600-5259800 Weak transcription NHDF-Ad bronchial
12 chr6:5215800-5251200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr6:5216200-5251400 Weak transcription Fetal Brain Female brain
14 chr6:5216400-5259600 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr6:5216600-5259600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr6:5220000-5245600 Weak transcription HMEC breast
17 chr6:5220800-5259600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:5222400-5253800 Weak transcription Dnd41 blood
19 chr6:5227800-5259800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr6:5230000-5245800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr6:5230200-5246400 Weak transcription Fetal Lung lung
22 chr6:5231000-5249400 Weak transcription HSMMtube muscle
23 chr6:5231000-5260200 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr6:5231200-5249800 Weak transcription HSMM muscle
25 chr6:5231400-5245600 Weak transcription NH-A brain
26 chr6:5231400-5250000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr6:5231600-5249200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr6:5231800-5259800 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr6:5231800-5260000 Weak transcription NHLF lung
30 chr6:5231800-5260200 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr6:5232000-5259800 Weak transcription HUVEC blood vessel
32 chr6:5232000-5260200 Weak transcription H9 Cell Line embryonic stem cell
33 chr6:5232400-5260000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr6:5232800-5253600 Weak transcription Psoas Muscle Psoas
35 chr6:5233200-5246800 Weak transcription Brain Substantia Nigra brain
36 chr6:5233400-5259800 Weak transcription Brain Angular Gyrus brain
37 chr6:5233400-5259800 Weak transcription Brain Cingulate Gyrus brain
38 chr6:5233400-5259800 Weak transcription Brain Hippocampus Middle brain
39 chr6:5233600-5254200 Weak transcription Ovary ovary
40 chr6:5233800-5253800 Weak transcription Rectal Smooth Muscle rectum
41 chr6:5234200-5257400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr6:5235200-5259400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr6:5235200-5259800 Weak transcription Adipose Nuclei Adipose
44 chr6:5235600-5259800 Weak transcription Primary monocytes fromperipheralblood blood
45 chr6:5235800-5259800 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr6:5236200-5254000 Weak transcription Hela-S3 cervix
47 chr6:5236400-5249800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:5236400-5259600 Weak transcription Fetal Intestine Large intestine
49 chr6:5236400-5260200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr6:5236600-5248600 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015