No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs544403250 |
chr2:54345899-54345900 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs564307312 |
chr2:54345904-54345905 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs533702383 |
chr2:54345941-54345942 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs140867724 |
chr2:54345947-54345948 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs527929845 |
chr2:54345967-54345968 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs560570336 |
chr2:54346049-54346050 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs533479396 |
chr2:54346124-54346125 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs71408752 |
chr2:54346188-54346189 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs111300484 |
chr2:54346209-54346210 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs10542497 |
chr2:54346217-54346218 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs34381809 |
chr2:54346220-54346221 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs549505090 |
chr2:54346243-54346244 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs569379123 |
chr2:54346321-54346322 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs538299633 |
chr2:54346417-54346418 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs550809308 |
chr2:54346419-54346420 |
Weak transcription Strong transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs75726099 |
chr2:54346438-54346439 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs9973583 |
chr2:54346440-54346441 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
18 |
rs144599134 |
chr2:54346445-54346446 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs368449785 |
chr2:54346446-54346447 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs552976473 |
chr2:54346530-54346531 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs35347104 |
chr2:54346562-54346563 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs529003573 |
chr2:54346563-54346564 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs572836942 |
chr2:54346600-54346601 |
Weak transcription Strong transcription Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs189247416 |
chr2:54346601-54346602 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs192107769 |
chr2:54346647-54346648 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs147886426 |
chr2:54346648-54346649 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs72906777 |
chr2:54346673-54346674 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs564368221 |
chr2:54346691-54346692 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs578099168 |
chr2:54346708-54346709 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs184288655 |
chr2:54346713-54346714 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs560622988 |
chr2:54346714-54346715 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs368114700 |
chr2:54346720-54346721 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs529547056 |
chr2:54346725-54346726 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs139887416 |
chr2:54346756-54346757 |
Weak transcription Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs372220606 |
chr2:54346811-54346812 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs562835575 |
chr2:54346821-54346822 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs369200849 |
chr2:54346840-54346841 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs528167818 |
chr2:54346844-54346845 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs531862202 |
chr2:54346854-54346855 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs551880586 |
chr2:54346857-54346858 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs547930599 |
chr2:54346882-54346883 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs189473506 |
chr2:54346902-54346903 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs539247411 |
chr2:54346908-54346909 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs546920144 |
chr2:54346937-54346938 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs180985588 |
chr2:54346952-54346953 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs535699222 |
chr2:54346996-54346997 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs60973940 |
chr2:54346998-54346999 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
48 |
rs34110148 |
chr2:54347008-54347009 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs6545386 |
chr2:54347040-54347041 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
50 |
rs113470216 |
chr2:54347046-54347047 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|