Variant report

Variant nsv1000847
Chromosome Location chr4:118186059-118285838
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:118188200-118188800 Enhancers GM12878-XiMat blood
2 chr4:118206000-118206800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr4:118206200-118206800 Enhancers Brain Inferior Temporal Lobe brain
4 chr4:118206400-118206800 Enhancers Brain Hippocampus Middle brain
5 chr4:118216000-118216400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr4:118232000-118232400 Enhancers Gastric stomach
7 chr4:118242800-118245000 Weak transcription HSMM muscle
8 chr4:118244800-118245800 Enhancers HMEC breast
9 chr4:118245000-118247600 Enhancers HSMM muscle
10 chr4:118245400-118245800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr4:118245400-118246600 Enhancers NH-A brain
12 chr4:118245800-118246000 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:118245800-118246000 Active TSS HSMMtube muscle
14 chr4:118245800-118246200 Flanking Active TSS HMEC breast
15 chr4:118246000-118246400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr4:118246000-118247000 Flanking Active TSS HSMMtube muscle
17 chr4:118246000-118250600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr4:118246200-118250400 Active TSS HMEC breast
19 chr4:118246400-118249600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr4:118246600-118247600 Flanking Active TSS NH-A brain
21 chr4:118247000-118249600 Active TSS HSMMtube muscle
22 chr4:118247600-118250000 Active TSS NH-A brain
23 chr4:118248600-118249200 Weak transcription HSMM muscle
24 chr4:118248600-118249600 Active TSS Brain Anterior Caudate brain
25 chr4:118248600-118249800 Active TSS Brain Substantia Nigra brain
26 chr4:118248800-118249200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
27 chr4:118248800-118249200 Enhancers Brain Angular Gyrus brain
28 chr4:118248800-118249200 Active TSS Brain Hippocampus Middle brain
29 chr4:118248800-118249400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr4:118249200-118249400 Flanking Active TSS Brain Angular Gyrus brain
31 chr4:118249400-118249800 Active TSS Brain Angular Gyrus brain
32 chr4:118249400-118249800 Enhancers Brain Hippocampus Middle brain
33 chr4:118249600-118249800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr4:118250000-118272600 Weak transcription NH-A brain
35 chr4:118250400-118250600 Weak transcription HMEC breast
36 chr4:118250600-118250800 Enhancers HMEC breast
37 chr4:118250600-118251400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:118250800-118257600 Weak transcription HMEC breast
39 chr4:118251400-118252000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr4:118251400-118256000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr4:118255200-118272800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr4:118256000-118256800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr4:118256800-118260000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr4:118257600-118258800 Strong transcription HMEC breast
45 chr4:118258800-118278600 Weak transcription HMEC breast
46 chr4:118260000-118260400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:118260400-118260600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:118260600-118262000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr4:118262000-118262400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr4:118262400-118267200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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