Variant report

Variant nsv1001597
Chromosome Location chr1:152511269-152555134
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:152508400-152513400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
2 chr1:152512000-152512800 Enhancers A549 lung
3 chr1:152516600-152517000 Enhancers Esophagus oesophagus
4 chr1:152519200-152519600 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr1:152531600-152532200 Active TSS Spleen Spleen
6 chr1:152534800-152535000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:152535000-152538400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:152537400-152537800 Enhancers GM12878-XiMat blood
9 chr1:152537800-152538200 Flanking Active TSS GM12878-XiMat blood
10 chr1:152538200-152538400 Enhancers GM12878-XiMat blood
11 chr1:152538400-152539600 Enhancers HMEC breast
12 chr1:152538400-152539800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:152538800-152539400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:152538800-152539800 Enhancers NHEK skin
15 chr1:152539000-152539600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:152539400-152541800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:152541800-152542400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:152542000-152544400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
19 chr1:152542400-152543000 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:152543000-152552600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:152546400-152547000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:152547000-152552400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:152549400-152549800 Enhancers GM12878-XiMat blood
24 chr1:152549400-152550800 Enhancers Muscle Satellite Cultured Cells --
25 chr1:152549400-152551400 Enhancers HSMMtube muscle
26 chr1:152549400-152551600 Enhancers HSMM muscle
27 chr1:152549800-152551400 Weak transcription GM12878-XiMat blood
28 chr1:152550800-152555200 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:152551400-152552600 Enhancers GM12878-XiMat blood
30 chr1:152551600-152552800 Weak transcription HSMM muscle
31 chr1:152552400-152553200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
32 chr1:152552400-152553400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:152552600-152553200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:152552600-152553200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:152552600-152553400 Enhancers HMEC breast
36 chr1:152552800-152553200 Enhancers HSMM muscle
37 chr1:152552800-152553400 Enhancers NHEK skin
38 chr1:152553400-152555000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:152553400-152555000 Weak transcription HMEC breast
40 chr1:152553400-152555200 Weak transcription NHEK skin
41 chr1:152555000-152555600 Flanking Active TSS A549 lung
42 chr1:152555000-152555600 Enhancers HMEC breast
43 chr1:152555000-152555800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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