Variant report

Variant nsv1002359
Chromosome Location chr4:69392102-69592846
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:281 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:69401800-69402200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr4:69402000-69402400 Enhancers HUES6 Cell Line embryonic stem cell
3 chr4:69402200-69402600 Strong transcription Rectal Mucosa Donor 31 rectum
4 chr4:69402400-69411000 Weak transcription Small Intestine intestine
5 chr4:69402600-69403200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr4:69402800-69403400 ZNF genes & repeats Liver Liver
7 chr4:69403200-69403800 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
8 chr4:69403400-69404800 Strong transcription Liver Liver
9 chr4:69403800-69404800 Strong transcription Rectal Mucosa Donor 31 rectum
10 chr4:69404200-69404600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr4:69404200-69410000 Weak transcription Colonic Mucosa Colon
12 chr4:69404600-69406200 Weak transcription Duodenum Mucosa Duodenum
13 chr4:69404800-69405600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr4:69404800-69406800 Weak transcription Liver Liver
15 chr4:69405600-69406800 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
16 chr4:69406200-69407000 Strong transcription Duodenum Mucosa Duodenum
17 chr4:69406800-69407800 Strong transcription Rectal Mucosa Donor 31 rectum
18 chr4:69406800-69409200 Strong transcription Liver Liver
19 chr4:69407000-69413800 Weak transcription Duodenum Mucosa Duodenum
20 chr4:69407800-69408200 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
21 chr4:69408200-69408600 Enhancers HepG2 liver
22 chr4:69408200-69409200 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr4:69409200-69413600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr4:69409200-69418800 Weak transcription Liver Liver
25 chr4:69413600-69418800 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr4:69417200-69418400 Enhancers NHEK skin
27 chr4:69417800-69418200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr4:69417800-69419200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr4:69417800-69420600 Enhancers HepG2 liver
30 chr4:69418600-69419200 Enhancers HUES64 Cell Line embryonic stem cell
31 chr4:69418800-69419200 Enhancers Liver Liver
32 chr4:69418800-69421800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr4:69420600-69421000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr4:69421000-69423400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr4:69421600-69423000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
36 chr4:69421800-69422200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:69421800-69422600 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr4:69422200-69430400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr4:69422400-69422800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr4:69422600-69431200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr4:69427200-69427400 Enhancers Liver Liver
42 chr4:69427400-69433200 Weak transcription Liver Liver
43 chr4:69429200-69439800 Weak transcription Right Atrium heart
44 chr4:69430400-69430800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:69431200-69431400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
46 chr4:69431200-69431600 Enhancers HMEC breast
47 chr4:69431400-69434600 Active TSS Rectal Mucosa Donor 31 rectum
48 chr4:69432800-69434200 Active TSS Duodenum Mucosa Duodenum
49 chr4:69433200-69433400 Flanking Active TSS Liver Liver
50 chr4:69433400-69434000 Active TSS Liver Liver

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