Variant report

Variant	nsv1002452
Chromosome Location	chr3:53742148-53802811
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:53763642-53764005	HepG2	liver:	n/a	n/a
2	ATF2	chr3:53766250-53766741	GM12878	blood:	n/a	n/a
3	ATF2	chr3:53782602-53783349	GM12878	blood:	n/a	n/a
4	BACH1	chr3:53744214-53744560	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:53755240-53755531	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr3:53787559-53787894	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr3:53778467-53778708	GM12878	blood:	n/a	n/a
8	BATF	chr3:53766290-53766604	GM12878	blood:	n/a	n/a
9	BCL11A	chr3:53782621-53782902	H1-hESC	embryonic stem cell:	n/a	n/a
10	BCLAF1	chr3:53782588-53783188	GM12878	blood:	n/a	chr3:53783056-53783065 chr3:53782970-53782979
11	BHLHE40	chr3:53802692-53803002	GM12878	blood:	n/a	n/a
12	BHLHE40	chr3:53766393-53766666	GM12878	blood:	n/a	n/a
13	BHLHE40	chr3:53756408-53756559	K562	blood:	n/a	n/a
14	BHLHE40	chr3:53782773-53783365	GM12878	blood:	n/a	n/a
15	BRCA1	chr3:53744226-53744426	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr3:53784983-53785006	GM12878	blood:	n/a	n/a
17	BRCA1	chr3:53790542-53790563	HepG2	liver:	n/a	n/a
18	BRCA1	chr3:53744307-53744502	HepG2	liver:	n/a	n/a
19	BRCA1	chr3:53783713-53783775	GM12878	blood:	n/a	n/a
20	CEBPB	chr3:53765316-53765583	HepG2	liver:	n/a	chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765439-53765450
21	CEBPB	chr3:53763817-53764049	HepG2	liver:	n/a	n/a
22	CEBPB	chr3:53745053-53745365	IMR90	lung:	n/a	chr3:53745184-53745195 chr3:53745223-53745234
23	CEBPB	chr3:53742058-53742367	A549	lung:	n/a	chr3:53742247-53742260
24	CEBPB	chr3:53799956-53800070	K562	blood:	n/a	n/a
25	CEBPB	chr3:53780089-53780218	A549	lung:	n/a	chr3:53780124-53780135
26	CEBPB	chr3:53765321-53765602	A549	lung:	n/a	chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765439-53765450
27	CEBPB	chr3:53745175-53745285	K562	blood:	n/a	chr3:53745184-53745195 chr3:53745223-53745234
28	CEBPB	chr3:53742019-53742430	MCF-7	breast:	n/a	chr3:53742247-53742260
29	CEBPB	chr3:53745072-53745320	HepG2	liver:	n/a	chr3:53745184-53745195 chr3:53745223-53745234
30	CEBPB	chr3:53741976-53742393	MCF-7	breast:	n/a	chr3:53742247-53742260
31	CEBPB	chr3:53744166-53744548	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr3:53765298-53765621	IMR90	lung:	n/a	chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765439-53765450
33	CEBPB	chr3:53765305-53765606	A549	lung:	n/a	chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765439-53765450
34	CEBPB	chr3:53779980-53780273	HepG2	liver:	n/a	chr3:53780124-53780135
35	CEBPB	chr3:53745067-53745281	Hela-S3	cervix:	n/a	chr3:53745184-53745195 chr3:53745223-53745234
36	CEBPB	chr3:53744170-53744481	HepG2	liver:	n/a	n/a
37	CEBPB	chr3:53788807-53788872	HepG2	liver:	n/a	chr3:53788837-53788850 chr3:53788838-53788849
38	CEBPB	chr3:53745132-53745328	A549	lung:	n/a	chr3:53745184-53745195 chr3:53745223-53745234
39	CEBPB	chr3:53780875-53781157	HepG2	liver:	n/a	n/a
40	CEBPB	chr3:53744154-53744581	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr3:53765340-53765514	H1-hESC	embryonic stem cell:	n/a	chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765438-53765449 chr3:53765440-53765449 chr3:53765438-53765451 chr3:53765438-53765451 chr3:53765440-53765449 chr3:53765439-53765450
42	CEBPB	chr3:53745062-53745353	H1-hESC	embryonic stem cell:	n/a	chr3:53745184-53745195 chr3:53745223-53745234
43	CEBPB	chr3:53759461-53759710	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr3:53763217-53763481	HepG2	liver:	n/a	chr3:53763338-53763349
45	CHD1	chr3:53802609-53802863	GM12878	blood:	n/a	n/a
46	CHD1	chr3:53782526-53782745	GM12878	blood:	n/a	n/a
47	CHD2	chr3:53800918-53800934	GM12878	blood:	n/a	n/a
48	CHD2	chr3:53751079-53751087	K562	blood:	n/a	n/a
49	CHD2	chr3:53744199-53744483	H1-hESC	embryonic stem cell:	n/a	n/a
50	CHD2	chr3:53744283-53744311	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:53764604-53764654	BE2_C	brain:	n/a
2	chr3:53801915-53801965	A549	lung:	n/a
3	chr3:53764604-53764654	BE2_C	brain:	n/a
4	chr3:53801915-53801965	A549	lung:	n/a
5	chr3:53781065-53781115	MCF10A-Er-Src	breast:	n/a
6	chr3:53795946-53795996	Hepatocyte	liver:	n/a
7	chr3:53781065-53781115	GM12892	blood:	n/a
8	chr3:53796066-53796116	SK-N-SH	brain:	n/a
9	chr3:53764604-53764654	AG04449	skin:	fetal
10	chr3:53782863-53782913	HL-60	blood:	n/a
11	chr3:53782863-53782913	HCPEpiC	choroid plexus:	n/a
12	chr3:53764604-53764654	T-47D	breast:	n/a
13	chr3:53781065-53781115	MCF-7	breast:	n/a
14	chr3:53764604-53764654	AG09309	skin:	n/a
15	chr3:53782863-53782913	AG09319	gingival:	n/a
16	chr3:53764401-53764451	HCF	heart:	n/a
17	chr3:53795946-53795996	HUVEC	blood vessel:	n/a
18	chr3:53801915-53801965	HRE	kidney:	n/a
19	chr3:53801915-53801965	HMEC	breast:	n/a
20	chr3:53782863-53782913	ProgFib	skin:	n/a
21	chr3:53781065-53781115	HPAEpiC	pulmonary alveolar:	n/a
22	chr3:53781107-53781157	GM12891	blood:	n/a
23	chr3:53781065-53781115	HCF	heart:	n/a
24	chr3:53764604-53764654	AG09319	gingival:	n/a
25	chr3:53796066-53796116	Jurkat	blood:	n/a
26	chr3:53801915-53801965	BE2_C	brain:	n/a
27	chr3:53764604-53764654	HCPEpiC	choroid plexus:	n/a
28	chr3:53764604-53764654	GM12891	blood:	n/a
29	chr3:53764604-53764654	SK-N-SH	brain:	n/a
30	chr3:53764401-53764451	Hela-S3	cervix:	n/a
31	chr3:53795946-53795996	HepG2	liver:	n/a
32	chr3:53764401-53764451	AG04449	skin:	fetal
33	chr3:53801915-53801965	HRCEpiC	kidney:	n/a
34	chr3:53782863-53782913	T-47D	breast:	n/a
35	chr3:53764401-53764451	NB4	blood:	n/a
36	chr3:53781065-53781115	Caco-2	colon:	n/a
37	chr3:53764401-53764451	AoSMC	blood vessel:	n/a
38	chr3:53764401-53764451	AG04450	lung:	fetal
39	chr3:53782863-53782913	A549	lung:	n/a
40	chr3:53781107-53781157	H1-hESC	embryonic stem cell:	embryo
41	chr3:53796066-53796116	HAEpiC	amniotic membrane:	n/a
42	chr3:53764401-53764451	CMK	blood:	n/a
43	chr3:53781065-53781115	A549	lung:	n/a
44	chr3:53764401-53764451	SAEC	small airway:	n/a
45	chr3:53764604-53764654	GM12892	blood:	n/a
46	chr3:53781107-53781157	PANC-1	pancreas:	n/a
47	chr3:53764604-53764654	PFSK-1	brain:	n/a
48	chr3:53795946-53795996	NHDF-neo	bronchial:	n/a
49	chr3:53801915-53801965	AG04450	lung:	fetal
50	chr3:53795946-53795996	ECC-1	luminal epithelium:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:53747075..53750039-chr3:53753263..53755603,3	MCF-7	breast:
2	chr3:53585012..53585627-chr3:53741687..53742458,2	MCF-7	breast:
3	chr3:53747075..53750039-chr3:53753263..53755603,3	MCF-7	breast:
4	chr3:53623121..53623778-chr3:53741614..53742232,2	MCF-7	breast:
5	chr3:53740542..53743254-chr3:53751040..53753856,2	MCF-7	breast:
6	chr3:53758884..53760805-chr3:53761482..53763140,2	MCF-7	breast:
7	chr3:53777857..53780018-chr3:53784994..53786883,2	K562	blood:
8	chr3:53711186..53712122-chr3:53743953..53744837,3	MCF-7	breast:
9	chr3:53764321..53765834-chr3:53878970..53881230,2	MCF-7	breast:
10	chr3:53565964..53566939-chr3:53744231..53744799,2	MCF-7	breast:
11	chr3:53711180..53712168-chr3:53743924..53744920,6	MCF-7	breast:
12	chr3:53527140..53529678-chr3:53742465..53744402,2	MCF-7	breast:
13	chr3:53698054..53699675-chr3:53742176..53745087,2	MCF-7	breast:
14	chr3:53764419..53766196-chr3:53767205..53769405,2	MCF-7	breast:
15	chr3:53754923..53757308-chr3:53878657..53881028,2	MCF-7	breast:
16	chr3:53764419..53766196-chr3:53767205..53769405,2	MCF-7	breast:
17	chr3:53777857..53780018-chr3:53784994..53786883,2	K562	blood:
18	chr3:53740542..53743254-chr3:53751040..53753856,2	MCF-7	breast:
19	chr3:53553264..53553901-chr3:53741724..53742273,2	MCF-7	breast:
20	chr3:53763032..53764866-chr3:53879026..53880653,2	MCF-7	breast:
21	chr3:53711493..53712139-chr3:53742078..53742918,2	MCF-7	breast:
22	chr3:53749411..53751208-chr3:54008710..54010882,2	K562	blood:
23	chr3:53758884..53760805-chr3:53761482..53763140,2	MCF-7	breast:
24	chr3:53409192..53409694-chr3:53743902..53744640,2	K562	blood:
25	chr3:53751914..53753667-chr3:53878854..53881213,2	MCF-7	breast:
26	chr3:53763487..53764052-chr3:53807744..53808528,2	MCF-7	breast:
27	chr3:53797911..53799633-chr3:53804369..53806585,2	K562	blood:
28	chr3:53741820..53744207-chr3:53806615..53808159,2	MCF-7	breast:

Variant related genes	Relation type
CACNA1D	TF binding region
CACNA1D	CpG island
ENSG00000016391	chromatin interactions
ENSG00000056736	chromatin interactions
ENSG00000157388	chromatin interactions

Extended variants
information (count: 2537 )
Associated
traits (count: 93 )

Variant overlapped rSNPs/rCNVs (count:2537 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2680661	chr3:53742148-53742149	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs557579988	chr3:53742154-53742155	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs577637286	chr3:53742156-53742157	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs539927421	chr3:53742188-53742189	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs144347680	chr3:53742216-53742217	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs146637852	chr3:53742221-53742222	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs542559399	chr3:53742226-53742227	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs77137352	chr3:53742228-53742229	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs549904430	chr3:53742246-53742247	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs140201560	chr3:53742320-53742321	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs2612015	chr3:53742331-53742332	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	mRNA abundance
12	rs565257645	chr3:53742381-53742382	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs529135091	chr3:53742384-53742385	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs527815007	chr3:53742400-53742401	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs28675949	chr3:53742403-53742404	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs56274554	chr3:53742455-53742456	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs567692531	chr3:53742486-53742487	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs374866737	chr3:53742530-53742531	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs149850490	chr3:53742538-53742539	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs114779681	chr3:53742560-53742561	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs77044646	chr3:53742640-53742641	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs73842092	chr3:53742646-53742647	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs565998986	chr3:53742698-53742699	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs574701733	chr3:53742722-53742723	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs539368071	chr3:53742732-53742733	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs6445598	chr3:53742736-53742737	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs115748911	chr3:53742780-53742781	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs35657034	chr3:53742800-53742801	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs116409054	chr3:53742804-53742805	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs537909814	chr3:53742822-53742823	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs79370913	chr3:53742828-53742829	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs545824512	chr3:53742842-53742843	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs573304922	chr3:53742945-53742946	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs145723175	chr3:53742946-53742947	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs562458134	chr3:53742982-53742983	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs574686888	chr3:53743050-53743051	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs544954137	chr3:53743108-53743109	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs13074345	chr3:53743112-53743113	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs193027209	chr3:53743126-53743127	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs547917403	chr3:53743144-53743145	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs148924769	chr3:53743154-53743155	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs530130536	chr3:53743250-53743251	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs550167199	chr3:53743252-53743253	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs570041848	chr3:53743254-53743255	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs539373071	chr3:53743291-53743292	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs552584484	chr3:53743344-53743345	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs183434309	chr3:53743383-53743384	Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs534858863	chr3:53743406-53743407	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs147686120	chr3:53743429-53743430	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs74350446	chr3:53743436-53743437	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:93)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
Adrenocortical carcinoma	18281524	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:667 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:53683200-53744200	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr3:53723200-53743400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr3:53726600-53744000	Weak transcription	Duodenum Mucosa	Duodenum
4	chr3:53726800-53743400	Weak transcription	Spleen	Spleen
5	chr3:53736800-53744000	Weak transcription	Stomach Smooth Muscle	stomach
6	chr3:53737400-53747800	Weak transcription	Fetal Brain Male	brain
7	chr3:53738800-53744000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr3:53739000-53743400	Enhancers	Fetal Lung	lung
9	chr3:53739800-53742800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
10	chr3:53739800-53744400	Enhancers	Fetal Heart	heart
11	chr3:53740000-53744200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr3:53740200-53743000	Weak transcription	Right Ventricle	heart
13	chr3:53740200-53764400	Weak transcription	Brain Cingulate Gyrus	brain
14	chr3:53740400-53745400	Weak transcription	Right Atrium	heart
15	chr3:53740600-53742400	Active TSS	Primary B cells from cord blood	blood
16	chr3:53740600-53744000	Weak transcription	Fetal Thymus	thymus
17	chr3:53740600-53744200	Weak transcription	Brain Anterior Caudate	brain
18	chr3:53741000-53744600	Enhancers	Liver	Liver
19	chr3:53741200-53743200	Enhancers	Fetal Intestine Small	intestine
20	chr3:53741200-53743800	Enhancers	Lung	lung
21	chr3:53741200-53751400	Weak transcription	Fetal Brain Female	brain
22	chr3:53741400-53742800	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr3:53741400-53743800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr3:53741600-53742800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr3:53741600-53743000	Enhancers	Fetal Intestine Large	intestine
26	chr3:53741800-53742600	Enhancers	Pancreas	Pancrea
27	chr3:53741800-53742600	Flanking Active TSS	A549	lung
28	chr3:53741800-53744400	Enhancers	Left Ventricle	heart
29	chr3:53742000-53742200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
30	chr3:53742000-53742400	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr3:53742000-53742600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr3:53742000-53742600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr3:53742000-53742600	Enhancers	Adipose Nuclei	Adipose
34	chr3:53742000-53742600	Enhancers	Gastric	stomach
35	chr3:53742000-53742600	Enhancers	Stomach Mucosa	stomach
36	chr3:53742000-53742600	Enhancers	HepG2	liver
37	chr3:53742000-53742600	Enhancers	Monocytes-CD14+_RO01746	blood
38	chr3:53742200-53742400	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr3:53742200-53742600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr3:53742200-53742600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr3:53742400-53743000	Weak transcription	Primary B cells from cord blood	blood
42	chr3:53742600-53743600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr3:53742600-53744000	Weak transcription	Stomach Mucosa	stomach
44	chr3:53742600-53744000	Weak transcription	Monocytes-CD14+_RO01746	blood
45	chr3:53742600-53744200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr3:53742600-53744200	Weak transcription	HepG2	liver
47	chr3:53742600-53744800	Enhancers	A549	lung
48	chr3:53742600-53778000	Weak transcription	Pancreas	Pancrea
49	chr3:53742800-53743000	Enhancers	Pancreatic Islets	Pancreatic Islet
50	chr3:53742800-53743200	Enhancers	Primary neutrophils fromperipheralblood	blood

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