Variant report

Variant	nsv1002978
Chromosome Location	chr3:60425237-60558331
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:402)
CpG islands
(count:122)
Chromatin interactive
region (count:33)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:402 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:60438400-60438401	K562	blood:	n/a	n/a
2	ARID3A	chr3:60438633-60438818	HepG2	liver:	n/a	n/a
3	ATF2	chr3:60490547-60490897	GM12878	blood:	n/a	n/a
4	ATF3	chr3:60541358-60541754	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:60506210-60506414	K562	blood:	n/a	n/a
6	BACH1	chr3:60477738-60477770	K562	blood:	n/a	n/a
7	BATF	chr3:60538939-60539154	GM12878	blood:	n/a	n/a
8	BATF	chr3:60541461-60541885	GM12878	blood:	n/a	chr3:60541671-60541682
9	BATF	chr3:60541502-60541804	GM12878	blood:	n/a	chr3:60541671-60541682
10	BATF	chr3:60490607-60490758	GM12878	blood:	n/a	n/a
11	BATF	chr3:60522246-60522459	GM12878	blood:	n/a	n/a
12	BCL11A	chr3:60514439-60514714	GM12878	blood:	n/a	n/a
13	BCL11A	chr3:60490569-60490827	GM12878	blood:	n/a	n/a
14	BCL11A	chr3:60541504-60541905	GM12878	blood:	n/a	n/a
15	BCL11A	chr3:60541461-60541764	GM12878	blood:	n/a	n/a
16	BCL11A	chr3:60490610-60490852	GM12878	blood:	n/a	n/a
17	BCL3	chr3:60541457-60541820	GM12878	blood:	n/a	n/a
18	BCLAF1	chr3:60541470-60541822	GM12878	blood:	n/a	n/a
19	BHLHE40	chr3:60500477-60500907	K562	blood:	n/a	n/a
20	BHLHE40	chr3:60541385-60541970	GM12878	blood:	n/a	n/a
21	BHLHE40	chr3:60500213-60500224	K562	blood:	n/a	n/a
22	CEBPB	chr3:60528680-60529009	K562	blood:	n/a	n/a
23	CEBPB	chr3:60438578-60438866	HepG2	liver:	n/a	n/a
24	CEBPB	chr3:60446915-60447183	K562	blood:	n/a	n/a
25	CEBPB	chr3:60492999-60493149	K562	blood:	n/a	n/a
26	CEBPB	chr3:60556976-60557552	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr3:60438816-60438988	H1-hESC	embryonic stem cell:	n/a	chr3:60438874-60438887
28	CEBPB	chr3:60541559-60541835	GM12878	blood:	n/a	n/a
29	CEBPB	chr3:60473036-60473256	K562	blood:	n/a	chr3:60473083-60473094 chr3:60473083-60473092
30	CEBPB	chr3:60441935-60442142	HepG2	liver:	n/a	chr3:60441990-60442001 chr3:60441988-60441999 chr3:60441990-60441999 chr3:60441988-60442001
31	CEBPB	chr3:60502858-60503358	K562	blood:	n/a	chr3:60503042-60503059 chr3:60503044-60503055
32	CEBPB	chr3:60515719-60515918	K562	blood:	n/a	n/a
33	CEBPB	chr3:60502891-60503236	HepG2	liver:	n/a	chr3:60503042-60503059 chr3:60503044-60503055
34	CEBPB	chr3:60502880-60503221	IMR90	lung:	n/a	chr3:60503042-60503059 chr3:60503044-60503055
35	CEBPB	chr3:60502935-60503162	H1-hESC	embryonic stem cell:	n/a	chr3:60503042-60503059 chr3:60503044-60503055
36	CEBPB	chr3:60452412-60452501	K562	blood:	n/a	n/a
37	CEBPB	chr3:60445566-60445776	K562	blood:	n/a	n/a
38	CHD1	chr3:60541274-60541431	GM12878	blood:	n/a	n/a
39	CHD2	chr3:60490587-60490880	GM12878	blood:	n/a	n/a
40	CREB1	chr3:60538902-60539194	GM12878	blood:	n/a	n/a
41	CREB1	chr3:60490627-60490860	GM12878	blood:	n/a	n/a
42	CREB1	chr3:60490511-60490992	GM12878	blood:	n/a	n/a
43	CTBP2	chr3:60541259-60542058	H1-hESC	embryonic stem cell:	n/a	n/a
44	CTCF	chr3:60542685-60542751	GM13976	blood:	n/a	n/a
45	CTCF	chr3:60522322-60522498	LNCaP	prostate:	n/a	n/a
46	CTCF	chr3:60513200-60513350	AG04449	skin:	n/a	n/a
47	CTCF	chr3:60529465-60529510	GM10266	blood:	n/a	n/a
48	CTCF	chr3:60513277-60513325	LNCaP	prostate:	n/a	n/a
49	CTCF	chr3:60522294-60522513	LNCaP	prostate:	n/a	n/a
50	CTCF	chr3:60513220-60513370	AG09309	skin:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:60534659-60534709	HCPEpiC	choroid plexus:	n/a
2	chr3:60541935-60541985	HRPEpiC	eye:	n/a
3	chr3:60541935-60541985	SK-N-MC	brain:	n/a
4	chr3:60541935-60541985	HEK293	kidney:	embryo
5	chr3:60541935-60541985	Caco-2	colon:	n/a
6	chr3:60541935-60541985	Hepatocyte	liver:	n/a
7	chr3:60541935-60541985	GM19239	blood:	n/a
8	chr3:60534659-60534709	ProgFib	skin:	n/a
9	chr3:60534659-60534709	SKMC	muscle:	n/a
10	chr3:60534659-60534709	AoSMC	blood vessel:	n/a
11	chr3:60541935-60541985	RPTEC	kidney:	n/a
12	chr3:60534659-60534709	Hela-S3	cervix:	n/a
13	chr3:60541935-60541985	HPAEpiC	pulmonary alveolar:	n/a
14	chr3:60534659-60534709	HRE	kidney:	n/a
15	chr3:60541935-60541985	CMK	blood:	n/a
16	chr3:60541935-60541985	ovcar-3	ovarian:	n/a
17	chr3:60541935-60541985	HUVEC	blood vessel:	n/a
18	chr3:60541935-60541985	NT2-D1	testis:	n/a
19	chr3:60541935-60541985	SK-N-SH_RA	brain:	n/a
20	chr3:60534659-60534709	SK-N-SH_RA	brain:	n/a
21	chr3:60541935-60541985	HL-60	blood:	n/a
22	chr3:60541935-60541985	BJ	skin:	n/a
23	chr3:60541935-60541985	SKMC	muscle:	n/a
24	chr3:60541935-60541985	MCF10A-Er-Src	breast:	n/a
25	chr3:60541935-60541985	IMR90	lung:	fetal
26	chr3:60534659-60534709	HAEpiC	amniotic membrane:	n/a
27	chr3:60534659-60534709	HPAEpiC	pulmonary alveolar:	n/a
28	chr3:60541935-60541985	Jurkat	blood:	n/a
29	chr3:60534659-60534709	GM06990	blood:	n/a
30	chr3:60534659-60534709	PFSK-1	brain:	n/a
31	chr3:60534659-60534709	GM12892	blood:	n/a
32	chr3:60541935-60541985	GM12878	blood:	n/a
33	chr3:60541935-60541985	HCT-116	colon:	n/a
34	chr3:60534659-60534709	HCT-116	colon:	n/a
35	chr3:60541935-60541985	HCF	heart:	n/a
36	chr3:60534659-60534709	HL-60	blood:	n/a
37	chr3:60541935-60541985	HCPEpiC	choroid plexus:	n/a
38	chr3:60534659-60534709	HRCEpiC	kidney:	n/a
39	chr3:60541935-60541985	PANC-1	pancreas:	n/a
40	chr3:60541935-60541985	HMEC	breast:	n/a
41	chr3:60534659-60534709	CMK	blood:	n/a
42	chr3:60541935-60541985	AG09319	gingival:	n/a
43	chr3:60534659-60534709	AG04449	skin:	fetal
44	chr3:60541935-60541985	LNCaP	prostate:	n/a
45	chr3:60534659-60534709	U87	brain:	n/a
46	chr3:60534659-60534709	GM12878	blood:	n/a
47	chr3:60534659-60534709	RPTEC	kidney:	n/a
48	chr3:60541935-60541985	AoSMC	blood vessel:	n/a
49	chr3:60534659-60534709	HMEC	breast:	n/a
50	chr3:60534659-60534709	NHDF-neo	bronchial:	n/a

(count:33 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:60476221..60479058-chr3:60482642..60484706,2	K562	blood:
2	chr3:60509060..60510930-chr3:60511428..60512938,2	K562	blood:
3	chr3:60506754..60508368-chr3:60516500..60519417,2	K562	blood:
4	chr3:60488135..60490633-chr3:60491194..60494068,2	K562	blood:
5	chr3:60476221..60479058-chr3:60482642..60484706,2	K562	blood:
6	chr3:60475674..60478079-chr3:60479619..60482202,2	K562	blood:
7	chr3:60486499..60489215-chr3:60499142..60502130,2	K562	blood:
8	chr3:60502053..60505036-chr3:60509426..60512103,2	K562	blood:
9	chr3:60532780..60534867-chr3:60539940..60541452,2	K562	blood:
10	chr3:60509060..60510930-chr3:60511428..60512938,2	K562	blood:
11	chr3:60500352..60502884-chr3:60536251..60537952,2	K562	blood:
12	chr3:60492215..60494697-chr3:60503496..60505338,2	K562	blood:
13	chr3:60503536..60506034-chr3:60508761..60510926,2	K562	blood:
14	chr3:60502053..60505036-chr3:60509426..60512103,2	K562	blood:
15	chr3:60500352..60502884-chr3:60536251..60537952,2	K562	blood:
16	chr3:60263321..60265309-chr3:60503721..60505576,2	K562	blood:
17	chr3:60492215..60494697-chr3:60503496..60505338,2	K562	blood:
18	chr3:60467604..60470651-chr3:60470930..60473335,3	K562	blood:
19	chr3:60435518..60437406-chr3:60439396..60441037,2	K562	blood:
20	chr3:60503536..60506034-chr3:60508761..60510926,2	K562	blood:
21	chr3:60540686..60542357-chr3:60544396..60547360,2	MCF-7	breast:
22	chr3:60468425..60470651-chr3:60470930..60473335,2	K562	blood:
23	chr3:60483853..60486464-chr3:60489187..60492049,2	K562	blood:
24	chr3:60486499..60489215-chr3:60499142..60502130,2	K562	blood:
25	chr3:60475674..60478079-chr3:60479619..60482202,2	K562	blood:
26	chr3:60540686..60542357-chr3:60544396..60547360,2	MCF-7	breast:
27	chr3:60488135..60490633-chr3:60491194..60494068,2	K562	blood:
28	chr3:60468425..60470651-chr3:60470930..60473335,2	K562	blood:
29	chr3:60532780..60534867-chr3:60539940..60541452,2	K562	blood:
30	chr3:60467604..60470651-chr3:60470930..60473335,3	K562	blood:
31	chr3:60435518..60437406-chr3:60439396..60441037,2	K562	blood:
32	chr3:60506754..60508368-chr3:60516500..60519417,2	K562	blood:
33	chr3:60483853..60486464-chr3:60489187..60492049,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FEZF2-9	chr3:60521543-60522712	NONHSAT090160

No data

Variant related genes	Relation type
FHIT	TF binding region
FHIT	CpG island

Extended variants
information (count: 4512 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:4512 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs190646297	chr3:60425241-60425242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs370410657	chr3:60425244-60425245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs555360453	chr3:60425259-60425260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs573761505	chr3:60425274-60425275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs541523399	chr3:60425283-60425284	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs150634203	chr3:60425296-60425297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs550895675	chr3:60425297-60425298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs567817190	chr3:60425304-60425305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs535556273	chr3:60425308-60425309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs139794440	chr3:60425309-60425310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs545769944	chr3:60425372-60425373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs377653772	chr3:60425381-60425382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs115051067	chr3:60425388-60425389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs576217436	chr3:60425410-60425411	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs368564167	chr3:60425439-60425440	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs75450472	chr3:60425453-60425454	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs561684829	chr3:60425478-60425479	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs528943634	chr3:60425499-60425500	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs78801030	chr3:60425514-60425515	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs559692049	chr3:60425521-60425522	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs533617994	chr3:60425531-60425532	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs116745267	chr3:60425543-60425544	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs181512373	chr3:60425579-60425580	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs35450706	chr3:60425583-60425584	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs185756898	chr3:60425586-60425587	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs34361915	chr3:60425604-60425605	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs80155745	chr3:60425614-60425615	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs567653004	chr3:60425616-60425617	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs191556455	chr3:60425655-60425656	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs34577004	chr3:60425681-60425682	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs553472239	chr3:60425697-60425698	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs77783785	chr3:60425718-60425719	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs144785032	chr3:60425732-60425733	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs182901171	chr3:60425737-60425738	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs147511136	chr3:60425786-60425787	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs35512291	chr3:60425802-60425803	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs543750984	chr3:60425826-60425827	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs540632901	chr3:60425835-60425836	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs113167368	chr3:60425907-60425908	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs145652871	chr3:60425966-60425967	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs145426402	chr3:60426000-60426001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs79853187	chr3:60426004-60426005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs532904493	chr3:60426070-60426071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs551522756	chr3:60426092-60426093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs551482759	chr3:60426129-60426130	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs563547975	chr3:60426135-60426136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs188058178	chr3:60426247-60426248	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs190745651	chr3:60426258-60426259	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs567542184	chr3:60426265-60426266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs535052213	chr3:60426316-60426317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	19490591	CNVD
Autism	18414403	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-small cell lung cancer	20864512	CNVD
Metastatic melanoma	17975146	CNVD
Cancer	18162546	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Urothelial cell carcinoma	18451213	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Colorectal cancer	16272173	CNVD
Mental retardation	17847001	CNVD
Neuroticism	17667963	CNVD
Squamous cell cancer	19047905	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Cancer	20164920	CNVD
Schizophrenia	23813976	CNVD
Autism	22102821	CNVD
Prostate cancer	19363497	CNVD
Malaria	21533027	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Colorectal cancer	21518781	CNVD
Esophageal cancer	21518781	CNVD
Cancer	20164919	CNVD
Schizophrenia	20967226	CNVD
Burkitt''s lymphoma	20823134	CNVD
Burkitt''s lymphoma	19759907	CNVD
Gastric cancer	22315472	CNVD
Ependymoma	20639864	CNVD

Chromatin state (count:281 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60420400-60430600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:60425400-60426000	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr3:60425400-60426000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr3:60425400-60426000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr3:60425600-60426000	Enhancers	H9 Cell Line	embryonic stem cell
6	chr3:60426400-60427000	Enhancers	Primary T helper cells fromperipheralblood	blood
7	chr3:60426600-60427200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr3:60430600-60430800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr3:60430600-60431000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr3:60430600-60431800	Enhancers	NHEK	skin
11	chr3:60430800-60431000	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr3:60430800-60431200	Enhancers	Placenta Amnion	Placenta Amnion
13	chr3:60430800-60431400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr3:60430800-60431400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr3:60430800-60431600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr3:60430800-60432200	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr3:60431000-60431400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr3:60431000-60431800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr3:60431000-60434800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr3:60431400-60431600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr3:60432000-60432400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr3:60434200-60435000	Enhancers	Fetal Stomach	stomach
23	chr3:60434200-60435000	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr3:60434800-60435200	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr3:60434800-60435200	Enhancers	H9 Cell Line	embryonic stem cell
26	chr3:60439000-60439400	Enhancers	Fetal Intestine Large	intestine
27	chr3:60441800-60442400	Enhancers	Primary T helper naive cells from peripheral blood	blood
28	chr3:60442000-60442400	Enhancers	Primary T cells from cord blood	blood
29	chr3:60446400-60448000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr3:60446600-60447600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr3:60446800-60447600	Enhancers	Adipose Nuclei	Adipose
32	chr3:60447200-60447800	Enhancers	Fetal Muscle Leg	muscle
33	chr3:60448400-60448600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr3:60448400-60448800	Enhancers	Pancreas	Pancrea
35	chr3:60449200-60449600	Enhancers	Fetal Intestine Large	intestine
36	chr3:60449200-60450000	Enhancers	Duodenum Mucosa	Duodenum
37	chr3:60449200-60450000	Enhancers	Fetal Intestine Small	intestine
38	chr3:60449200-60450000	Enhancers	Stomach Mucosa	stomach
39	chr3:60454600-60455400	Enhancers	HUES64 Cell Line	embryonic stem cell
40	chr3:60454600-60455400	Enhancers	iPS-20b Cell Line	embryonic stem cell
41	chr3:60454800-60455400	Enhancers	HUES48 Cell Line	embryonic stem cell
42	chr3:60455000-60455600	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr3:60455400-60458600	Weak transcription	HUES48 Cell Line	embryonic stem cell
44	chr3:60455600-60458800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
45	chr3:60458600-60458800	Enhancers	H1 Cell Line	embryonic stem cell
46	chr3:60458600-60459200	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr3:60458800-60459200	Enhancers	Brain Germinal Matrix	brain
48	chr3:60458800-60459400	Enhancers	iPS-15b Cell Line	embryonic stem cell
49	chr3:60458800-60459400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
50	chr3:60459400-60461600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links