Variant report

Variant nsv1003573
Chromosome Location chr1:196825211-197005106
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:349 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:196846800-196847000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:196846800-196847400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:196846800-196847600 Active TSS Fetal Brain Female brain
4 chr1:196847000-196847200 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
5 chr1:196847000-196847200 Bivalent Enhancer Colon Smooth Muscle Colon
6 chr1:196847000-196847200 Enhancers Fetal Brain Male brain
7 chr1:196847000-196847200 Active TSS Psoas Muscle Psoas
8 chr1:196847000-196847200 Active TSS A549 lung
9 chr1:196847000-196847400 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
10 chr1:196847000-196847400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
11 chr1:196847000-196847400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:196847000-196847400 Active TSS Muscle Satellite Cultured Cells --
13 chr1:196847000-196847400 Active TSS Liver Liver
14 chr1:196847000-196847400 Active TSS Brain Anterior Caudate brain
15 chr1:196847000-196847400 Bivalent Enhancer Brain Hippocampus Middle brain
16 chr1:196847000-196847400 Active TSS Osteobl bone
17 chr1:196847000-196847600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
18 chr1:196847000-196847600 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
19 chr1:196847000-196847600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
20 chr1:196847000-196847600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:196847000-196847600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:196847000-196847600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:196847000-196847600 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:196847000-196847600 Active TSS Brain Germinal Matrix brain
25 chr1:196847200-196847400 Active TSS H9 Cell Line embryonic stem cell
26 chr1:196847200-196847400 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:196847200-196847400 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
28 chr1:196847200-196847400 Bivalent Enhancer Esophagus oesophagus
29 chr1:196847200-196847400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
30 chr1:196847200-196847400 Bivalent/Poised TSS Fetal Heart heart
31 chr1:196847200-196847400 Active TSS Fetal Lung lung
32 chr1:196847200-196847400 Flanking Active TSS Psoas Muscle Psoas
33 chr1:196847200-196847400 Enhancers Right Ventricle heart
34 chr1:196847200-196847400 Bivalent Enhancer HMEC breast
35 chr1:196847200-196847400 Active TSS NH-A brain
36 chr1:196847200-196847400 Active TSS NHDF-Ad bronchial
37 chr1:196847200-196847600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:196847200-196847600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:196847200-196847600 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:196847200-196847600 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:196847200-196847600 Active TSS Brain Cingulate Gyrus brain
42 chr1:196847200-196847600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr1:196847200-196847600 Enhancers Duodenum Smooth Muscle Duodenum
44 chr1:196847200-196847600 Active TSS Fetal Muscle Trunk muscle
45 chr1:196847200-196847600 Active TSS Ovary ovary
46 chr1:196847200-196847600 Enhancers Pancreas Pancrea
47 chr1:196847200-196847600 Bivalent/Poised TSS A549 lung
48 chr1:196847200-196847600 Active TSS NHLF lung
49 chr1:196847400-196847600 Bivalent Enhancer ES-WA7 Cell Line embryonic stem cell
50 chr1:196847400-196847600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell

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