Variant report

Variant	nsv1004827
Chromosome Location	chr3:527295-838994
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:932)
CpG islands
(count:244)
Chromatin interactive
region (count:36)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:932 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:534692-534822	HepG2	liver:	n/a	n/a
2	BACH1	chr3:541423-541496	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr3:577662-577951	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr3:599827-600084	GM12878	blood:	n/a	chr3:599953-599962
5	BATF	chr3:599789-600089	GM12878	blood:	n/a	chr3:599953-599962
6	BATF	chr3:638972-639242	GM12878	blood:	n/a	chr3:639093-639102
7	BCLAF1	chr3:599656-600200	GM12878	blood:	n/a	chr3:599779-599788 chr3:599826-599835
8	BHLHE40	chr3:543200-543216	GM12878	blood:	n/a	n/a
9	BRCA1	chr3:817416-817453	Hela-S3	cervix:	n/a	n/a
10	BRCA1	chr3:638578-639330	Hela-S3	cervix:	n/a	n/a
11	BRCA1	chr3:674381-674581	H1-hESC	embryonic stem cell:	n/a	n/a
12	BRCA1	chr3:639591-639851	Hela-S3	cervix:	n/a	n/a
13	BRCA1	chr3:815996-816027	Hela-S3	cervix:	n/a	n/a
14	BRCA1	chr3:649451-649478	Hela-S3	cervix:	n/a	n/a
15	BRCA1	chr3:754720-755580	Hela-S3	cervix:	n/a	n/a
16	CEBPB	chr3:700968-701307	HepG2	liver:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
17	CEBPB	chr3:746911-747209	Hela-S3	cervix:	n/a	n/a
18	CEBPB	chr3:611097-611344	HepG2	liver:	n/a	chr3:611201-611212
19	CEBPB	chr3:672488-672700	HepG2	liver:	n/a	chr3:672554-672567 chr3:672555-672566
20	CEBPB	chr3:575781-576057	Hela-S3	cervix:	n/a	n/a
21	CEBPB	chr3:700997-701241	H1-hESC	embryonic stem cell:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
22	CEBPB	chr3:544957-545231	H1-hESC	embryonic stem cell:	n/a	chr3:545063-545076 chr3:545064-545075
23	CEBPB	chr3:775096-775429	Hela-S3	cervix:	n/a	n/a
24	CEBPB	chr3:780130-780267	K562	blood:	n/a	chr3:780198-780209
25	CEBPB	chr3:754295-754516	HepG2	liver:	n/a	chr3:754384-754393 chr3:754382-754393
26	CEBPB	chr3:650024-650224	A549	lung:	n/a	chr3:650073-650084 chr3:650075-650084
27	CEBPB	chr3:544919-545200	A549	lung:	n/a	chr3:545063-545076 chr3:545064-545075
28	CEBPB	chr3:534354-535027	Hela-S3	cervix:	n/a	chr3:534767-534778
29	CEBPB	chr3:637765-638119	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr3:780119-780347	HepG2	liver:	n/a	chr3:780198-780209
31	CEBPB	chr3:560575-560880	HepG2	liver:	n/a	chr3:560731-560742
32	CEBPB	chr3:534600-534964	HepG2	liver:	n/a	chr3:534767-534778
33	CEBPB	chr3:766071-766268	HepG2	liver:	n/a	chr3:766173-766184
34	CEBPB	chr3:700961-701300	Hela-S3	cervix:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
35	CEBPB	chr3:816945-817493	Hela-S3	cervix:	n/a	n/a
36	CEBPB	chr3:591255-591764	Hela-S3	cervix:	n/a	n/a
37	CEBPB	chr3:544911-545212	IMR90	lung:	n/a	chr3:545063-545076 chr3:545064-545075
38	CEBPB	chr3:555007-555386	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr3:544910-545217	Hela-S3	cervix:	n/a	chr3:545063-545076 chr3:545064-545075
40	CEBPB	chr3:701078-701278	A549	lung:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
41	CEBPB	chr3:754275-756263	Hela-S3	cervix:	n/a	chr3:754384-754393 chr3:754382-754393 chr3:755103-755114
42	CEBPB	chr3:672472-672697	A549	lung:	n/a	chr3:672554-672567 chr3:672555-672566
43	CEBPB	chr3:834255-834315	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr3:649955-650248	IMR90	lung:	n/a	chr3:650073-650084 chr3:650075-650084
45	CEBPB	chr3:649124-649464	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr3:674328-674574	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr3:545112-545116	K562	blood:	n/a	n/a
48	CEBPB	chr3:700965-701296	IMR90	lung:	n/a	chr3:701126-701139 chr3:701128-701137 chr3:701128-701137 chr3:701128-701137
49	CEBPB	chr3:795219-795424	K562	blood:	n/a	n/a
50	CEBPB	chr3:638934-639824	Hela-S3	cervix:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:577629-577679	HEK293	kidney:	embryo
2	chr3:577964-578014	A549	lung:	n/a
3	chr3:577821-577871	HNPCEpiC	eye:	n/a
4	chr3:577821-577871	GM12878	blood:	n/a
5	chr3:782757-782807	HepG2	liver:	n/a
6	chr3:577629-577679	HepG2	liver:	n/a
7	chr3:577821-577871	ProgFib	skin:	n/a
8	chr3:577964-578014	Jurkat	blood:	n/a
9	chr3:577964-578014	HCPEpiC	choroid plexus:	n/a
10	chr3:577821-577871	GM06990	blood:	n/a
11	chr3:577821-577871	HEEpiC	esophagus:	n/a
12	chr3:577629-577679	H1-hESC	embryonic stem cell:	embryo
13	chr3:577821-577871	AG10803	skin:	n/a
14	chr3:577821-577871	PANC-1	pancreas:	n/a
15	chr3:577629-577679	SK-N-SH_RA	brain:	n/a
16	chr3:577629-577679	HEEpiC	esophagus:	n/a
17	chr3:577821-577871	Hepatocyte	liver:	n/a
18	chr3:577629-577679	HCF	heart:	n/a
19	chr3:577964-578014	HL-60	blood:	n/a
20	chr3:577964-578014	NHBE	bronchial:	n/a
21	chr3:782757-782807	GM12878	blood:	n/a
22	chr3:577964-578014	HCF	heart:	n/a
23	chr3:782757-782807	SAEC	small airway:	n/a
24	chr3:577964-578014	AG09319	gingival:	n/a
25	chr3:577821-577871	HCM	heart:	n/a
26	chr3:577629-577679	PANC-1	pancreas:	n/a
27	chr3:577629-577679	NHDF-neo	bronchial:	n/a
28	chr3:782757-782807	NHBE	bronchial:	n/a
29	chr3:577821-577871	SK-N-MC	brain:	n/a
30	chr3:577964-578014	BE2_C	brain:	n/a
31	chr3:577821-577871	T-47D	breast:	n/a
32	chr3:577964-578014	HRE	kidney:	n/a
33	chr3:577629-577679	ovcar-3	ovarian:	n/a
34	chr3:782757-782807	H1-hESC	embryonic stem cell:	embryo
35	chr3:577629-577679	AoSMC	blood vessel:	n/a
36	chr3:577964-578014	HRPEpiC	eye:	n/a
37	chr3:577964-578014	H1-hESC	embryonic stem cell:	embryo
38	chr3:577964-578014	MCF-7	breast:	n/a
39	chr3:577964-578014	K562	blood:	n/a
40	chr3:782757-782807	K562	blood:	n/a
41	chr3:577821-577871	GM12891	blood:	n/a
42	chr3:782757-782807	BE2_C	brain:	n/a
43	chr3:577629-577679	AG09319	gingival:	n/a
44	chr3:577629-577679	SK-N-MC	brain:	n/a
45	chr3:577629-577679	ProgFib	skin:	n/a
46	chr3:577629-577679	MCF-7	breast:	n/a
47	chr3:782757-782807	GM12891	blood:	n/a
48	chr3:577964-578014	LNCaP	prostate:	n/a
49	chr3:782757-782807	AG09309	skin:	n/a
50	chr3:782757-782807	HEK293	kidney:	embryo

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:829999..831597-chr3:832456..834541,2	MCF-7	breast:
2	chr21:9537493..9539688-chr3:612236..614804,2	MCF-7	breast:
3	chr20:14175439..14177996-chr3:730394..733241,2	MCF-7	breast:
4	chr3:829999..831597-chr3:832456..834541,2	MCF-7	breast:
5	chr20:12921782..12922300-chr3:762237..762760,2	MCF-7	breast:
6	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
7	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
8	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
9	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
10	chr3:674203..674975-chr3:2197712..2198482,2	MCF-7	breast:
11	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
12	chr3:565796..568589-chr3:571178..572728,2	K562	blood:
13	chr3:751166..753010-chr3:765105..767568,2	K562	blood:
14	chr3:522873..523625-chr3:674344..674995,2	MCF-7	breast:
15	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
16	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
17	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
18	chr21:9517250..9519290-chr3:632442..635070,2	MCF-7	breast:
19	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
20	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
21	chr1:229050784..229051693-chr3:758018..758663,2	MCF-7	breast:
22	chr3:571404..573075-chr3:573790..576325,2	MCF-7	breast:
23	chr3:731301..733205-chr3:733252..736265,3	K562	blood:
24	chr3:805612..808013-chr3:811141..813375,2	K562	blood:
25	chr3:709932..711493-chr3:712317..715172,2	K562	blood:
26	chr3:746367..749271-chr3:749542..752426,2	K562	blood:
27	chr3:762317..764340-chr3:779905..782757,2	K562	blood:
28	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
29	chr21:9533639..9536328-chr3:614645..617390,2	MCF-7	breast:
30	chr3:674217..674800-chr3:1123463..1123990,2	MCF-7	breast:
31	chr3:703062..705164-chr3:828470..830008,2	K562	blood:
32	chr3:726576..727076-chr3:11025934..11026463,2	MCF-7	breast:
33	chr3:556350..557928-chr3:558208..559835,2	MCF-7	breast:
34	chr3:554700..557337-chr3:557649..560284,2	K562	blood:
35	chr3:512741..514299-chr3:528430..530623,2	K562	blood:
36	chr12:101154422..101155178-chr3:753774..754622,2	MCF-7	breast:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CHL1-6	chr3:608788-608866	ucscGeneNc_uc003boy_1
2	lnc-CHL1-3	chr3:633788-633866	NR_110118
3	lnc-CHL1-3	chr3:577941-579275	NONHSAT087570
4	lnc-CHL1-3	chr3:791898-791933	ENSG00000224957
5	lnc-CHL1-3	chr3:791898-791933	NR_110118
6	lnc-IL5RA-14	chr3:659472-659997	NONHSAT087571
7	lnc-CHL1-3	chr3:633788-633866	ENSG00000224957
8	lnc-CHL1-3	chr3:577936-578010	ENSG00000224957
9	lnc-CHL1-6	chr3:766898-766933	ucscGeneNc_uc003boy_1
10	lnc-CHL1-6	chr3:552914-553010	ucscGeneNc_uc003boy_1

No data

Variant related genes	Relation type
ENSG00000224957	TF binding region
ENSG00000238075	TF binding region
ENSG00000224957	CpG island
ENSG00000238075	CpG island
IL10	miRNA target sites
DCBLD2	miRNA target sites

Extended variants
information (count: 4793 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:4793 , 50 per page) page: 1 2 3 4 5 6 7 ... 96

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs544497227	chr3:527319-527320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs188942379	chr3:527344-527345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs541041498	chr3:527358-527359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs147157105	chr3:527361-527362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs181550987	chr3:527378-527379	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs140422621	chr3:527385-527386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs561515801	chr3:527433-527434	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs531946215	chr3:527450-527451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs186206044	chr3:527484-527485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs191028863	chr3:527514-527515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs144178409	chr3:527565-527566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs12632442	chr3:527569-527570	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs182054565	chr3:527575-527576	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs13070369	chr3:527627-527628	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs533574057	chr3:527638-527639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs185924629	chr3:527644-527645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs575098113	chr3:527704-527705	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs57665600	chr3:527735-527736	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs150073855	chr3:527759-527760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs553704582	chr3:527774-527775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs145409782	chr3:527776-527777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs34315432	chr3:527785-527786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs376840932	chr3:527838-527839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs149181331	chr3:527845-527846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs567121986	chr3:527876-527877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs534309401	chr3:527877-527878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs75220051	chr3:527902-527903	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs574585109	chr3:527904-527905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs373303660	chr3:527936-527937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs146808777	chr3:527954-527955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs190864653	chr3:527959-527960	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs9842061	chr3:527963-527964	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs79515703	chr3:528038-528039	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs565418851	chr3:528060-528061	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs577506459	chr3:528101-528102	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs9823811	chr3:528105-528106	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs561804329	chr3:528131-528132	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs140627370	chr3:528152-528153	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs145632387	chr3:528153-528154	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs548239182	chr3:528203-528204	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs563461430	chr3:528236-528237	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs530595576	chr3:528251-528252	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs148098665	chr3:528252-528253	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs528947636	chr3:528271-528272	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs536561232	chr3:528303-528304	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs373770360	chr3:528326-528327	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs200951101	chr3:528347-528348	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs71634791	chr3:528348-528349	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs9838856	chr3:528349-528350	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs568020205	chr3:528358-528359	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Cancer	20164920	CNVD
Lung cancer	16618734	CNVD
Autism	18349135	CNVD
Breast cancer	20409316	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Intellectual disability	22045946	CNVD
Squamous cell cancer	19607727	CNVD
Gastric adenocarcinoma	19115996	CNVD
sporadic birth defects	19047251	CNVD
Mental retardation	17124404	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Sudden cardiac death	19188705	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Neuroblastoma	18923191	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Autism	22543975	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Tetralogy of Fallot	22912587	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	20685689	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:270 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:525800-529200	Weak transcription	Ovary	ovary
2	chr3:526800-533800	Weak transcription	Hela-S3	cervix
3	chr3:526800-543200	Weak transcription	Aorta	Aorta
4	chr3:527000-528200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr3:528000-528800	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr3:528200-528600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr3:528200-528800	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr3:528200-529000	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr3:528800-534000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr3:528800-534200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr3:529000-534200	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr3:529200-529800	Enhancers	Ovary	ovary
13	chr3:533000-534200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr3:533800-534200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr3:533800-534200	Enhancers	Hela-S3	cervix
16	chr3:533800-535000	Enhancers	Fetal Intestine Large	intestine
17	chr3:534000-534200	Enhancers	GM12878-XiMat	blood
18	chr3:534000-534400	Enhancers	Liver	Liver
19	chr3:534000-534600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr3:534000-535000	Enhancers	H9 Cell Line	embryonic stem cell
21	chr3:534000-535000	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr3:534200-534600	Enhancers	Fetal Intestine Small	intestine
23	chr3:534200-534600	Active TSS	GM12878-XiMat	blood
24	chr3:534200-534800	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr3:534200-534800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr3:534200-534800	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr3:534200-535000	Enhancers	HUES6 Cell Line	embryonic stem cell
28	chr3:534200-535000	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr3:534200-535000	Flanking Active TSS	Hela-S3	cervix
30	chr3:534400-534800	Flanking Active TSS	Liver	Liver
31	chr3:534400-534800	Enhancers	Fetal Kidney	kidney
32	chr3:534400-535000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr3:534600-534800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr3:534600-534800	Enhancers	GM12878-XiMat	blood
35	chr3:534800-535000	Enhancers	Liver	Liver
36	chr3:534800-540600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr3:535000-535200	Enhancers	Hela-S3	cervix
38	chr3:540600-540800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr3:543600-543800	Enhancers	Aorta	Aorta
40	chr3:554600-556200	Enhancers	Hela-S3	cervix
41	chr3:554600-556400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr3:554800-556400	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr3:555400-556400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr3:556000-556400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr3:560600-561200	Enhancers	Fetal Lung	lung
46	chr3:561200-562200	Weak transcription	Fetal Lung	lung
47	chr3:562600-562800	Enhancers	Fetal Lung	lung
48	chr3:563400-564600	Weak transcription	Aorta	Aorta
49	chr3:564200-564800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr3:564600-564800	Enhancers	Aorta	Aorta

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