Variant report

Variant	nsv1005452
Chromosome Location	chr1:196706866-196812518
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:196712502-196712701	K562	blood:	n/a	n/a
2	BATF	chr1:196743800-196744098	GM12878	blood:	n/a	chr1:196743977-196743985
3	CBX3	chr1:196707787-196708233	K562	blood:	n/a	n/a
4	CBX3	chr1:196707919-196708187	K562	blood:	n/a	n/a
5	CEBPB	chr1:196792584-196792829	HepG2	liver:	n/a	chr1:196792695-196792706 chr1:196792696-196792707 chr1:196792695-196792708 chr1:196792697-196792706
6	CEBPB	chr1:196792559-196792845	IMR90	lung:	n/a	chr1:196792695-196792706 chr1:196792696-196792707 chr1:196792695-196792708 chr1:196792826-196792839 chr1:196792697-196792706
7	CEBPB	chr1:196745101-196745132	IMR90	lung:	n/a	n/a
8	CEBPB	chr1:196792658-196792868	A549	lung:	n/a	chr1:196792695-196792706 chr1:196792696-196792707 chr1:196792695-196792708 chr1:196792826-196792839 chr1:196792697-196792706
9	CTCF	chr1:196797080-196797230	HCFaa	heart:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
10	CTCF	chr1:196712520-196712670	Hela-S3	cervix:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
11	CTCF	chr1:196712460-196712610	GM12871	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
12	CTCF	chr1:196712500-196712650	HPAF	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
13	CTCF	chr1:196797140-196797290	SK-N-SH_RA	brain:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
14	CTCF	chr1:196712269-196712787	A549	lung:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
15	CTCF	chr1:196797120-196797270	AG04449	skin:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
16	CTCF	chr1:196712520-196712670	HEEpiC	esophagus:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
17	CTCF	chr1:196712500-196712650	HBMEC	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
18	CTCF	chr1:196712440-196712590	AG09319	gingival:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
19	CTCF	chr1:196712518-196712644	GM20000	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
20	CTCF	chr1:196808521-196808574	GM20000	blood:	n/a	n/a
21	CTCF	chr1:196797044-196797302	Hela-S3	cervix:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
22	CTCF	chr1:196712410-196712684	HUVEC	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
23	CTCF	chr1:196797120-196797270	HPF	lung:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
24	CTCF	chr1:196712460-196712610	HAc	cerebellar:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
25	CTCF	chr1:196748420-196748570	MCF-7	breast:	n/a	n/a
26	CTCF	chr1:196712231-196712354	GM10266	blood:	n/a	n/a
27	CTCF	chr1:196712500-196712650	NB4	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
28	CTCF	chr1:196748430-196748470	HepG2	liver:	n/a	n/a
29	CTCF	chr1:196712315-196712756	SK-N-SH	brain:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
30	CTCF	chr1:196712480-196712630	HMEC	breast:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
31	CTCF	chr1:196712447-196712671	Hela-S3	cervix:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
32	CTCF	chr1:196712600-196712750	HCT-116	colon:	n/a	n/a
33	CTCF	chr1:196797100-196797250	BJ	skin:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
34	CTCF	chr1:196712620-196712770	A549	lung:	n/a	n/a
35	CTCF	chr1:196712420-196712570	SK-N-SH_RA	brain:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
36	CTCF	chr1:196712441-196712682	MCF-7	breast:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
37	CTCF	chr1:196797100-196797250	Hela-S3	cervix:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
38	CTCF	chr1:196797100-196797250	HBMEC	blood vessel:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
39	CTCF	chr1:196748400-196748550	HCT-116	colon:	n/a	n/a
40	CTCF	chr1:196712460-196712610	GM12865	blood:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
41	CTCF	chr1:196748320-196748470	GM12864	blood:	n/a	n/a
42	CTCF	chr1:196712500-196712650	HPF	lung:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
43	CTCF	chr1:196712441-196712614	A549	lung:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
44	CTCF	chr1:196712492-196712644	SK-N-SH_RA	brain:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
45	CTCF	chr1:196797065-196797245	GM10248	blood:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178
46	CTCF	chr1:196707732-196707767	GM10266	blood:	n/a	n/a
47	CTCF	chr1:196712480-196712630	HPAF	blood vessel:	n/a	chr1:196712547-196712554 chr1:196712544-196712560 chr1:196712543-196712561 chr1:196712545-196712566
48	CTCF	chr1:196777082-196777168	GM20000	blood:	n/a	n/a
49	CTCF	chr1:196755888-196755951	MCF-7	breast:	n/a	n/a
50	CTCF	chr1:196797080-196797230	Caco-2	colon:	n/a	chr1:196797163-196797184 chr1:196797161-196797179 chr1:196797165-196797172 chr1:196797162-196797178

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:196787850-196787900	HCF	heart:	n/a
2	chr1:196787850-196787900	U87	brain:	n/a
3	chr1:196787850-196787900	AG04449	skin:	fetal
4	chr1:196787850-196787900	HCT-116	colon:	n/a
5	chr1:196787850-196787900	MCF-7	breast:	n/a
6	chr1:196787850-196787900	ECC-1	luminal epithelium:	n/a
7	chr1:196743672-196743722	HNPCEpiC	eye:	n/a
8	chr1:196743672-196743722	Hepatocyte	liver:	n/a
9	chr1:196743672-196743722	H1-hESC	embryonic stem cell:	embryo
10	chr1:196746875-196746925	SAEC	small airway:	n/a
11	chr1:196795943-196795993	T-47D	breast:	n/a
12	chr1:196743672-196743722	SKMC	muscle:	n/a
13	chr1:196746875-196746925	BE2_C	brain:	n/a
14	chr1:196743672-196743722	HPAEpiC	pulmonary alveolar:	n/a
15	chr1:196746875-196746925	AoSMC	blood vessel:	n/a
16	chr1:196795943-196795993	HCF	heart:	n/a
17	chr1:196743672-196743722	HepG2	liver:	n/a
18	chr1:196787850-196787900	ovcar-3	ovarian:	n/a
19	chr1:196743672-196743722	HRPEpiC	eye:	n/a
20	chr1:196743672-196743722	AG10803	skin:	n/a
21	chr1:196743672-196743722	NH-A	brain:	n/a
22	chr1:196787850-196787900	NHDF-neo	bronchial:	n/a
23	chr1:196795943-196795993	AG04450	lung:	fetal
24	chr1:196743672-196743722	Hela-S3	cervix:	n/a
25	chr1:196743672-196743722	GM06990	blood:	n/a
26	chr1:196795943-196795993	SAEC	small airway:	n/a
27	chr1:196743672-196743722	GM12878	blood:	n/a
28	chr1:196746875-196746925	H1-hESC	embryonic stem cell:	embryo
29	chr1:196746875-196746925	AG10803	skin:	n/a
30	chr1:196746875-196746925	AG09319	gingival:	n/a
31	chr1:196746875-196746925	CMK	blood:	n/a
32	chr1:196795943-196795993	HIPEpiC	eye:	n/a
33	chr1:196795943-196795993	NHDF-neo	bronchial:	n/a
34	chr1:196795943-196795993	MCF10A-Er-Src	breast:	n/a
35	chr1:196787850-196787900	HL-60	blood:	n/a
36	chr1:196746875-196746925	SKMC	muscle:	n/a
37	chr1:196743672-196743722	ovcar-3	ovarian:	n/a
38	chr1:196795943-196795993	GM12891	blood:	n/a
39	chr1:196743672-196743722	PANC-1	pancreas:	n/a
40	chr1:196743672-196743722	HEEpiC	esophagus:	n/a
41	chr1:196746875-196746925	HCM	heart:	n/a
42	chr1:196795943-196795993	HRE	kidney:	n/a
43	chr1:196743672-196743722	HRE	kidney:	n/a
44	chr1:196795943-196795993	LNCaP	prostate:	n/a
45	chr1:196787850-196787900	GM19239	blood:	n/a
46	chr1:196795943-196795993	RPTEC	kidney:	n/a
47	chr1:196743672-196743722	HAEpiC	amniotic membrane:	n/a
48	chr1:196743672-196743722	NB4	blood:	n/a
49	chr1:196787850-196787900	SAEC	small airway:	n/a
50	chr1:196746875-196746925	Caco-2	colon:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:196712121..196712996-chr1:197035666..197036522,2	MCF-7	breast:
2	chr1:196711011..196712654-chr1:196796494..196798129,2	MCF-7	breast:
3	chr1:196734362..196735975-chr1:196744220..196746531,2	MCF-7	breast:
4	chr1:196734362..196735975-chr1:196744220..196746531,2	MCF-7	breast:
5	chr1:196712168..196712942-chr1:196796703..196797590,3	MCF-7	breast:
6	chr1:196706600..196708493-chr1:196711945..196714734,2	K562	blood:
7	chr1:196712193..196713017-chr1:197326079..197326750,3	MCF-7	breast:
8	chr1:196711931..196712944-chr1:196796605..196797511,4	MCF-7	breast:
9	chr1:196706600..196708493-chr1:196711945..196714734,2	K562	blood:
10	chr1:196738269..196739930-chr1:196742962..196745311,2	MCF-7	breast:
11	chr1:196711011..196712654-chr1:196796494..196798129,2	MCF-7	breast:
12	chr1:196712168..196712942-chr1:196796703..196797590,3	MCF-7	breast:
13	chr1:196711931..196712944-chr1:196796605..196797511,4	MCF-7	breast:
14	chr1:196796721..196797658-chr1:196859492..196860452,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CFHR2-1	chr1:196790015-196790332	NONHSAT008601
2	lnc-CFHR2-1	chr1:196797200-196797297	NONHSAT008603
3	lnc-CFHR2-1	chr1:196795959-196796135	NONHSAT008600
4	lnc-CFHR2-1	chr1:196794607-196795156	NONHSAT008602
5	lnc-CFHR2-1	chr1:196788952-196789032	NONHSAT008601
6	lnc-CFHR1-1	chr1:196758890-196759357	NONHSAT008599
7	lnc-CFHR1-1	chr1:196762447-196762763	NONHSAT008599
8	lnc-CFHR2-1	chr1:196794354-196794801	NONHSAT008603
9	lnc-CFHR2-1	chr1:196788995-196789032	NONHSAT008602
10	lnc-CFHR2-1	chr1:196794607-196794801	NONHSAT008600
11	lnc-CFHR2-1	chr1:196788893-196789032	NONHSAT008600
12	lnc-CFHR2-1	chr1:196795959-196796135	NONHSAT008603
13	lnc-CFHR2-1	chr1:196797280-196797376	NONHSAT008600
14	lnc-CFHR2-1	chr1:196797200-196797225	NONHSAT008600

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CFH	hsa-miR-146a-5p	chr1:196716478-196716499

Variant related genes	Relation type
CFHR2	TF binding region
CFHR1	TF binding region
CFHR3	TF binding region
CFHR2	CpG island
CFHR1	CpG island
CFHR3	CpG island
ENSG00000116785	chromatin interactions
ENSG00000143278	chromatin interactions

Extended variants
information (count: 2767 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:2767 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11799956	chr1:196706866-196706867	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs56152784	chr1:196706902-196706903	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs574742690	chr1:196706937-196706938	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs184739862	chr1:196706945-196706946	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs34344258	chr1:196706977-196706978	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs188732309	chr1:196707007-196707008	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs543879	chr1:196707015-196707016	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs35700477	chr1:196707046-196707047	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs56326601	chr1:196707069-196707070	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs532208871	chr1:196707073-196707074	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs547180443	chr1:196707096-196707097	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs113812376	chr1:196707100-196707101	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs373482653	chr1:196707158-196707159	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs146757022	chr1:196707172-196707173	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs529679691	chr1:196707173-196707174	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs185074605	chr1:196707202-196707203	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
17	rs537435073	chr1:196707219-196707220	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
18	rs548467908	chr1:196707270-196707271	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
19	rs34807691	chr1:196707336-196707337	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs189973793	chr1:196707361-196707362	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
21	rs150189973	chr1:196707376-196707377	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
22	rs145732325	chr1:196707389-196707390	ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
23	rs116723052	chr1:196707667-196707668	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs422682	chr1:196707685-196707686	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs181319806	chr1:196707715-196707716	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs542272777	chr1:196707739-196707740	ZNF genes & repeats Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs554888675	chr1:196707818-196707819	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs576371176	chr1:196707846-196707847	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs111638354	chr1:196707895-196707896	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs35331736	chr1:196707901-196707902	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs532218192	chr1:196707914-196707915	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs541113251	chr1:196707916-196707917	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs188306968	chr1:196707948-196707949	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs552871264	chr1:196708023-196708024	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs180710653	chr1:196708024-196708025	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs187651014	chr1:196708026-196708027	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs147066775	chr1:196708031-196708032	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs552596930	chr1:196708052-196708053	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs574812747	chr1:196708055-196708056	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs116506498	chr1:196708081-196708082	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs570919736	chr1:196708092-196708093	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs191961124	chr1:196708161-196708162	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs412739	chr1:196708168-196708169	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs408497	chr1:196708172-196708173	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs535970353	chr1:196708236-196708237	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs138456877	chr1:196708240-196708241	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs34745219	chr1:196708292-196708293	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs182093678	chr1:196708305-196708306	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs537312081	chr1:196708343-196708344	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs572656868	chr1:196708358-196708359	ZNF genes & repeats Strong transcription Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Liposarcoma	21253554	CNVD
Burkitt''s lymphoma	18698080	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Cancer	20164919	CNVD
Medulloblastoma	21979893	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Neuroblastoma	21899760	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Hepatocellular carcinoma	18803288	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	21611746	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	17393978	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-small cell lung cancer	19010865	CNVD
Mental retardation	17847001	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Trisomy 5 syndrome	21098271	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Mental retardation	21062444	CNVD
Liver carcinoma	19366792	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:174 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:196649600-196707200	Weak transcription	Osteobl	bone
2	chr1:196678600-196707000	Weak transcription	HSMMtube	muscle
3	chr1:196690800-196707200	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr1:196691200-196718400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr1:196693000-196707800	Weak transcription	Lung	lung
6	chr1:196693200-196707800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr1:196693600-196707000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr1:196693600-196707000	Weak transcription	Fetal Muscle Trunk	muscle
9	chr1:196695600-196707600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr1:196699200-196707200	Weak transcription	Adipose Nuclei	Adipose
11	chr1:196701200-196707000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr1:196701800-196707000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:196702200-196707200	Weak transcription	Primary hematopoietic stem cells	blood
14	chr1:196702800-196707200	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr1:196702800-196709600	Weak transcription	Stomach Smooth Muscle	stomach
16	chr1:196703800-196707000	Weak transcription	Fetal Muscle Leg	muscle
17	chr1:196703800-196707800	Weak transcription	Small Intestine	intestine
18	chr1:196704600-196707200	Strong transcription	Liver	Liver
19	chr1:196705200-196707200	Weak transcription	NH-A	brain
20	chr1:196705400-196709600	ZNF genes & repeats	Dnd41	blood
21	chr1:196706000-196708000	Strong transcription	Skeletal Muscle Female	skeletal muscle
22	chr1:196706000-196710600	Strong transcription	HSMM	muscle
23	chr1:196706000-196711400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr1:196706200-196709000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr1:196706600-196707400	Strong transcription	Ovary	ovary
26	chr1:196706600-196707400	Strong transcription	Psoas Muscle	Psoas
27	chr1:196706600-196709200	Strong transcription	Muscle Satellite Cultured Cells	--
28	chr1:196706600-196709400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr1:196706600-196710200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr1:196706800-196709200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr1:196707000-196707200	Strong transcription	Fetal Muscle Trunk	muscle
32	chr1:196707000-196707200	ZNF genes & repeats	HSMMtube	muscle
33	chr1:196707000-196708400	ZNF genes & repeats	Fetal Muscle Leg	muscle
34	chr1:196707000-196708800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr1:196707000-196709000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
36	chr1:196707000-196709400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr1:196707000-196709400	Weak transcription	K562	blood
38	chr1:196707200-196707600	Transcr. at gene 5' and 3'	Liver	Liver
39	chr1:196707200-196707800	ZNF genes & repeats	NH-A	brain
40	chr1:196707200-196708200	ZNF genes & repeats	Osteobl	bone
41	chr1:196707200-196708400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
42	chr1:196707200-196708800	ZNF genes & repeats	Adipose Nuclei	Adipose
43	chr1:196707200-196708800	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
44	chr1:196707200-196709000	ZNF genes & repeats	Fetal Muscle Trunk	muscle
45	chr1:196707200-196709200	ZNF genes & repeats	Primary hematopoietic stem cells	blood
46	chr1:196707400-196708000	ZNF genes & repeats	Fetal Lung	lung
47	chr1:196707400-196708400	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
48	chr1:196707400-196708400	ZNF genes & repeats	Ovary	ovary
49	chr1:196707400-196722400	Weak transcription	Psoas Muscle	Psoas
50	chr1:196707600-196708000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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