Variant report

Variant nsv1005854
Chromosome Location chr2:178546907-178586608
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:243 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178536600-178556000 Weak transcription Pancreas Pancrea
2 chr2:178540000-178547400 Enhancers Fetal Kidney kidney
3 chr2:178544000-178548000 Enhancers K562 blood
4 chr2:178544600-178552600 Weak transcription Fetal Intestine Small intestine
5 chr2:178545000-178547000 Enhancers Duodenum Mucosa Duodenum
6 chr2:178545200-178548000 Weak transcription Adipose Nuclei Adipose
7 chr2:178545400-178549200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:178545800-178547400 Enhancers iPS-18 Cell Line embryonic stem cell
9 chr2:178546000-178547200 Enhancers HUES6 Cell Line embryonic stem cell
10 chr2:178546200-178548600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:178546400-178547000 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr2:178546400-178547200 Enhancers H1 Cell Line embryonic stem cell
13 chr2:178546400-178547200 Enhancers H9 Cell Line embryonic stem cell
14 chr2:178546400-178547200 Enhancers HUES64 Cell Line embryonic stem cell
15 chr2:178546400-178547200 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr2:178546800-178547200 Enhancers Small Intestine intestine
17 chr2:178546800-178554400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr2:178547000-178552800 Weak transcription Duodenum Mucosa Duodenum
19 chr2:178547200-178548200 Enhancers HepG2 liver
20 chr2:178547400-178549000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr2:178547400-178554400 Weak transcription Fetal Kidney kidney
22 chr2:178548000-178548600 Enhancers Adipose Nuclei Adipose
23 chr2:178548000-178548600 Flanking Active TSS K562 blood
24 chr2:178548200-178549400 Weak transcription HepG2 liver
25 chr2:178548600-178549200 Weak transcription Adipose Nuclei Adipose
26 chr2:178548600-178549400 Enhancers K562 blood
27 chr2:178548600-178549600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr2:178549200-178549400 Enhancers Adipose Nuclei Adipose
29 chr2:178549200-178550000 Enhancers Fetal Adrenal Gland Adrenal Gland
30 chr2:178549400-178550000 Enhancers Stomach Mucosa stomach
31 chr2:178549400-178550200 Enhancers HepG2 liver
32 chr2:178549400-178554400 Weak transcription K562 blood
33 chr2:178549600-178550400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr2:178550000-178554200 Weak transcription Stomach Mucosa stomach
35 chr2:178550000-178557000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr2:178550400-178555800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr2:178552600-178552800 Enhancers Sigmoid Colon Sigmoid Colon
38 chr2:178552600-178553000 Enhancers Fetal Intestine Small intestine
39 chr2:178552800-178553000 Enhancers Fetal Intestine Large intestine
40 chr2:178552800-178553000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
41 chr2:178552800-178553200 Enhancers Duodenum Mucosa Duodenum
42 chr2:178552800-178553200 Enhancers Rectal Mucosa Donor 31 rectum
43 chr2:178552800-178554000 Enhancers Dnd41 blood
44 chr2:178553000-178553400 Enhancers Rectal Mucosa Donor 29 rectum
45 chr2:178553000-178554200 Weak transcription Fetal Intestine Small intestine
46 chr2:178553000-178557000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:178553000-178557000 Weak transcription Fetal Intestine Large intestine
48 chr2:178553200-178557000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr2:178553200-178557200 Weak transcription Duodenum Mucosa Duodenum
50 chr2:178553400-178554400 Weak transcription Rectal Mucosa Donor 29 rectum

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