Variant report

Variant	nsv1006564
Chromosome Location	chr1:120050603-120078534
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr1:120057981-120058087	K562	blood:	n/a	n/a
2	BRCA1	chr1:120074076-120074158	H1-hESC	embryonic stem cell:	n/a	n/a
3	BRCA1	chr1:120072413-120072427	H1-hESC	embryonic stem cell:	n/a	n/a
4	CTCF	chr1:120055520-120055670	HCT-116	colon:	n/a	chr1:120055660-120055668
5	CTCF	chr1:120059380-120059530	HEEpiC	esophagus:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
6	CTCF	chr1:120059360-120059510	HRE	kidney:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
7	CTCF	chr1:120059360-120059510	SAEC	small airway:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
8	CTCF	chr1:120059240-120059390	GM12866	blood:	n/a	chr1:120059257-120059266
9	CTCF	chr1:120059320-120059470	GM12875	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
10	CTCF	chr1:120059296-120059731	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
11	CTCF	chr1:120052618-120052676	LNCaP	prostate:	n/a	n/a
12	CTCF	chr1:120059640-120059790	A549	lung:	n/a	n/a
13	CTCF	chr1:120059400-120059550	GM12867	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
14	CTCF	chr1:120059400-120059550	GM12873	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
15	CTCF	chr1:120059400-120059550	GM12878	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
16	CTCF	chr1:120059225-120059664	H1-hESC	embryonic stem cell:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059257-120059266 chr1:120059427-120059435
17	CTCF	chr1:120059217-120059721	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059257-120059266 chr1:120059427-120059435
18	CTCF	chr1:120059380-120059530	GM12871	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
19	CTCF	chr1:120059420-120059570	BE2_C	brain:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
20	CTCF	chr1:120059420-120059570	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
21	CTCF	chr1:120059380-120059530	Hela-S3	cervix:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
22	CTCF	chr1:120059340-120059490	Caco-2	colon:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
23	CTCF	chr1:120059400-120059550	SAEC	small airway:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
24	CTCF	chr1:120057150-120057245	GM13976	blood:	n/a	n/a
25	CTCF	chr1:120059400-120059550	HEEpiC	esophagus:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
26	CTCF	chr1:120059420-120059570	GM12868	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
27	CTCF	chr1:120059345-120059585	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
28	CTCF	chr1:120059400-120059550	WERI-Rb-1	eye:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
29	CTCF	chr1:120059420-120059570	GM12864	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
30	CTCF	chr1:120059140-120059780	A549	lung:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059257-120059266 chr1:120059427-120059435
31	CTCF	chr1:120059380-120059530	HMEC	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
32	CTCF	chr1:120059360-120059610	NHEK	skin:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
33	CTCF	chr1:120059380-120059530	HCT-116	colon:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
34	CTCF	chr1:120059440-120059590	GM12873	blood:	n/a	n/a
35	CTCF	chr1:120068900-120068917	GM20000	blood:	n/a	n/a
36	CTCF	chr1:120059360-120059510	HepG2	liver:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
37	CTCF	chr1:120059408-120059528	A549	lung:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
38	CTCF	chr1:120059420-120059570	HCT-116	colon:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
39	CTCF	chr1:120059373-120059553	HepG2	liver:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
40	CTCF	chr1:120059374-120059548	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
41	CTCF	chr1:120059320-120059470	A549	lung:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
42	CTCF	chr1:120059363-120059563	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
43	CTCF	chr1:120059340-120059490	GM12867	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
44	CTCF	chr1:120059420-120059570	NHEK	skin:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
45	CTCF	chr1:120059361-120059559	MCF-7	breast:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
46	CTCF	chr1:120059303-120059655	H1-hESC	embryonic stem cell:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
47	CTCF	chr1:120059440-120059590	GM12874	blood:	n/a	n/a
48	CTCF	chr1:120055810-120055860	GM13976	blood:	n/a	n/a
49	CTCF	chr1:120059400-120059550	GM12864	blood:	n/a	chr1:120059428-120059441 chr1:120059428-120059436 chr1:120059427-120059435
50	CTCF	chr1:120059438-120059488	NHEK	skin:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:120076995-120077045	Jurkat	blood:	n/a
2	chr1:120076995-120077045	HRCEpiC	kidney:	n/a
3	chr1:120076995-120077045	HCPEpiC	choroid plexus:	n/a
4	chr1:120076995-120077045	ovcar-3	ovarian:	n/a
5	chr1:120076995-120077045	ProgFib	skin:	n/a
6	chr1:120076995-120077045	AG09309	skin:	n/a
7	chr1:120076995-120077045	HRE	kidney:	n/a
8	chr1:120076995-120077045	NB4	blood:	n/a
9	chr1:120076995-120077045	U87	brain:	n/a
10	chr1:120076995-120077045	CMK	blood:	n/a
11	chr1:120076995-120077045	SKMC	muscle:	n/a
12	chr1:120076995-120077045	NHDF-neo	bronchial:	n/a
13	chr1:120076995-120077045	T-47D	breast:	n/a
14	chr1:120076995-120077045	HUVEC	blood vessel:	n/a
15	chr1:120076995-120077045	HAEpiC	amniotic membrane:	n/a
16	chr1:120076995-120077045	HIPEpiC	eye:	n/a
17	chr1:120076995-120077045	H1-hESC	embryonic stem cell:	embryo
18	chr1:120076995-120077045	AG09319	gingival:	n/a
19	chr1:120076995-120077045	SAEC	small airway:	n/a
20	chr1:120076995-120077045	NH-A	brain:	n/a
21	chr1:120076995-120077045	PFSK-1	brain:	n/a
22	chr1:120076995-120077045	GM19239	blood:	n/a
23	chr1:120076995-120077045	A549	lung:	n/a
24	chr1:120076995-120077045	SK-N-SH	brain:	n/a
25	chr1:120076995-120077045	HEEpiC	esophagus:	n/a
26	chr1:120076995-120077045	NT2-D1	testis:	n/a
27	chr1:120076995-120077045	HPAEpiC	pulmonary alveolar:	n/a
28	chr1:120076995-120077045	HEK293	kidney:	embryo
29	chr1:120076995-120077045	AG04449	skin:	fetal
30	chr1:120076995-120077045	RPTEC	kidney:	n/a
31	chr1:120076995-120077045	K562	blood:	n/a
32	chr1:120076995-120077045	HCF	heart:	n/a
33	chr1:120076995-120077045	LNCaP	prostate:	n/a
34	chr1:120076995-120077045	GM12878	blood:	n/a
35	chr1:120076995-120077045	IMR90	lung:	fetal
36	chr1:120076995-120077045	Hela-S3	cervix:	n/a
37	chr1:120076995-120077045	AG10803	skin:	n/a
38	chr1:120076995-120077045	MCF10A-Er-Src	breast:	n/a
39	chr1:120076995-120077045	Caco-2	colon:	n/a
40	chr1:120076995-120077045	SK-N-MC	brain:	n/a
41	chr1:120076995-120077045	PrEC	prostate:	n/a
42	chr1:120076995-120077045	HNPCEpiC	eye:	n/a
43	chr1:120076995-120077045	BJ	skin:	n/a
44	chr1:120076995-120077045	HepG2	liver:	n/a
45	chr1:120076995-120077045	ECC-1	luminal epithelium:	n/a
46	chr1:120076995-120077045	AoSMC	blood vessel:	n/a
47	chr1:120076995-120077045	GM12892	blood:	n/a
48	chr1:120076995-120077045	SK-N-SH_RA	brain:	n/a
49	chr1:120076995-120077045	HMEC	breast:	n/a
50	chr1:120076995-120077045	BE2_C	brain:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:120018495..120019084-chr1:120059040..120059941,2	MCF-7	breast:
2	chr1:119915016..119915722-chr1:120059055..120059910,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HSD3B2-1	chr1:120074820-120078855	ENSG00000249401
2	lnc-ZNF697-4	chr1:120076171-120076936	NONHSAT005568

Variant related genes	Relation type
GAPDHP32	TF binding region
HSD3BP3	TF binding region
GAPDHP32	CpG island
HSD3BP3	CpG island
PHTF1	miRNA target sites

Extended variants
information (count: 1259 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:1259 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs587594327	chr1:120050608-120050609	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs140461525	chr1:120050609-120050610	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs587727562	chr1:120050631-120050632	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs144721484	chr1:120050655-120050656	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs147481892	chr1:120050725-120050726	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs139917165	chr1:120050730-120050731	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs145342984	chr1:120050757-120050758	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs201834332	chr1:120050779-120050780	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs367757825	chr1:120050783-120050784	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs184847118	chr1:120050791-120050792	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs587675829	chr1:120050795-120050796	Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs370254322	chr1:120050805-120050806	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
13	rs189605024	chr1:120050808-120050809	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
14	rs140526022	chr1:120050846-120050847	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
15	rs587632027	chr1:120050909-120050910	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
16	rs181445673	chr1:120050910-120050911	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
17	rs34274124	chr1:120050912-120050913	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
18	rs587753788	chr1:120050913-120050914	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
19	rs587628642	chr1:120050940-120050941	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
20	rs200881873	chr1:120050993-120050994	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
21	rs113534463	chr1:120050994-120050995	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
22	rs587629137	chr1:120051002-120051003	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
23	rs587716757	chr1:120051005-120051006	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
24	rs397981511	chr1:120051006-120051007	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
25	rs587746542	chr1:120051071-120051072	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
26	rs587656432	chr1:120051089-120051090	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
27	rs185931648	chr1:120051102-120051103	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
28	rs587631524	chr1:120051111-120051112	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
29	rs58933433	chr1:120051122-120051123	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs190636408	chr1:120051127-120051128	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
31	rs111474051	chr1:120051134-120051135	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
32	rs140011520	chr1:120051146-120051147	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
33	rs587733454	chr1:120051149-120051150	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
34	rs187424516	chr1:120051185-120051186	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
35	rs587673624	chr1:120051189-120051190	Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
36	rs72693147	chr1:120051233-120051234	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
37	rs587726872	chr1:120051273-120051274	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
38	rs112116132	chr1:120051275-120051276	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
39	rs587630412	chr1:120051287-120051288	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
40	rs587681836	chr1:120051340-120051341	Flanking Active TSS Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
41	rs587734159	chr1:120051431-120051432	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
42	rs587615518	chr1:120051435-120051436	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
43	rs587689312	chr1:120051442-120051443	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
44	rs3765945	chr1:120051446-120051447	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs149842910	chr1:120051455-120051456	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
46	rs56119175	chr1:120051520-120051521	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs587776310	chr1:120051528-120051529	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
48	rs72547206	chr1:120051534-120051535	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs587743735	chr1:120051568-120051569	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
50	rs376856572	chr1:120051590-120051591	Weak transcription Enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Cancer	21129771	CNVD
Non-small cell lung cancer	21385341	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Medulloblastoma	21979893	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Pancreatic endocrine tumor	17639061	CNVD
small cell lung cancer	20016488	CNVD
Aetanephric adenomas	20802469	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Systemic lupus erythematosus	21956041	CNVD
Breast cancer	21804112	CNVD
Mental retardation	21062444	CNVD
Myelofibrosis	22110671	CNVD
Emphysema	19352772	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21858162	CNVD
Follicular lymphoma	18703704	CNVD
Breast cancer	21509527	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164920	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21760589	CNVD
Breast cancer	22522925	CNVD
Cancer	21272361	CNVD

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:120047800-120052200	Weak transcription	HMEC	breast
2	chr1:120048000-120051400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:120048000-120051600	Weak transcription	NHEK	skin
4	chr1:120048200-120051800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr1:120048200-120052000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr1:120050200-120050800	Active TSS	Placenta	Placenta
7	chr1:120050200-120051000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr1:120050200-120051200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr1:120050800-120053000	Transcr. at gene 5' and 3'	Placenta	Placenta
10	chr1:120051000-120051400	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr1:120051200-120051400	Bivalent Enhancer	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:120051200-120053600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr1:120051400-120052000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr1:120051400-120052200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr1:120051600-120053600	Enhancers	NHEK	skin
16	chr1:120051800-120053600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr1:120052000-120053600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr1:120052200-120052800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr1:120052200-120053600	Enhancers	HMEC	breast
20	chr1:120052800-120055600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr1:120053000-120053200	Genic enhancers	Placenta	Placenta
22	chr1:120053200-120054000	Transcr. at gene 5' and 3'	Placenta	Placenta
23	chr1:120054000-120058600	Genic enhancers	Placenta	Placenta
24	chr1:120055600-120057200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr1:120057200-120058000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr1:120058000-120058200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr1:120058200-120058400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr1:120058200-120060400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr1:120058600-120061400	Enhancers	Placenta	Placenta
30	chr1:120059000-120059200	Bivalent Enhancer	HSMMtube	muscle
31	chr1:120059200-120061400	Enhancers	HSMMtube	muscle
32	chr1:120059400-120060400	Enhancers	Fetal Muscle Trunk	muscle
33	chr1:120059400-120061400	Enhancers	Adipose Nuclei	Adipose
34	chr1:120059600-120060600	Enhancers	Ovary	ovary
35	chr1:120059800-120061000	Enhancers	HSMM	muscle
36	chr1:120060000-120060400	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr1:120060000-120061000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr1:120060000-120062000	Enhancers	Fetal Heart	heart
39	chr1:120060200-120060800	Enhancers	Pancreas	Pancrea
40	chr1:120060200-120061000	Enhancers	Liver	Liver
41	chr1:120060200-120061000	Enhancers	Fetal Muscle Leg	muscle
42	chr1:120060400-120060600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr1:120060400-120060600	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr1:120060600-120061600	Weak transcription	Ovary	ovary
45	chr1:120061400-120069000	Weak transcription	Placenta	Placenta
46	chr1:120061600-120062000	Enhancers	Ovary	ovary
47	chr1:120061800-120062200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr1:120069000-120069600	ZNF genes & repeats	Placenta	Placenta
49	chr1:120069600-120070400	Strong transcription	Placenta	Placenta
50	chr1:120070400-120071000	Weak transcription	Placenta	Placenta

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