Variant report

Variant nsv1006871
Chromosome Location chr1:190808578-191197488
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:161 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:190818800-190819200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:190826800-190828000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:190829200-190829800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:190832800-190834000 Enhancers HMEC breast
5 chr1:190832800-190834200 Enhancers NHEK skin
6 chr1:190833000-190834000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:190833000-190834000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:190833000-190834400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:190833200-190833600 Enhancers Gastric stomach
10 chr1:190833400-190833800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:190833400-190833800 Enhancers Esophagus oesophagus
12 chr1:190858200-190858400 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:190860600-190860800 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:190872200-190873400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:190872600-190873800 Enhancers NH-A brain
16 chr1:190872800-190873600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:190873000-190873800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:190873400-190873800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:190873400-190873800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:190873400-190873800 Enhancers HMEC breast
21 chr1:190873800-190874000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:190873800-190874800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:190874000-190877600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:190875000-190875200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:190875600-190875800 Enhancers Colon Smooth Muscle Colon
26 chr1:190876000-190878400 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr1:190876400-190876600 Enhancers Colon Smooth Muscle Colon
28 chr1:190877600-190878400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:190881000-190881400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:190881200-190881400 Enhancers ES-WA7 Cell Line embryonic stem cell
31 chr1:190884800-190885400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:190885000-190886000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
33 chr1:190885400-190898800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:190898800-190899000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:190898800-190899200 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr1:190899000-190899200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:190903000-190903200 Enhancers Fetal Brain Male brain
38 chr1:190903400-190904400 Weak transcription Fetal Brain Male brain
39 chr1:190904400-190905200 Enhancers Fetal Brain Male brain
40 chr1:190904400-190905800 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr1:190904400-190906000 Enhancers iPS-20b Cell Line embryonic stem cell
42 chr1:190904400-190906200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:190904400-190906200 Enhancers Cortex derived primary cultured neurospheres brain
44 chr1:190904600-190904800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr1:190904800-190905400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:190904800-190905600 Enhancers HUES64 Cell Line embryonic stem cell
47 chr1:190904800-190905600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:190904800-190905800 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr1:190904800-190906600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:190905000-190905600 Enhancers ES-I3 Cell Line embryonic stem cell

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