Variant report

Variant	nsv1007593
Chromosome Location	chr4:9802146-9956285
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1218)
CpG islands
(count:489)
Chromatin interactive
region (count:22)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1218 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:9952887-9953127	K562	blood:	n/a	n/a
2	ATF1	chr4:9850013-9850273	K562	blood:	n/a	n/a
3	ATF1	chr4:9927280-9927595	K562	blood:	n/a	n/a
4	ATF1	chr4:9929162-9929613	K562	blood:	n/a	n/a
5	ATF2	chr4:9809744-9810072	GM12878	blood:	n/a	n/a
6	ATF2	chr4:9814641-9815054	GM12878	blood:	n/a	n/a
7	ATF3	chr4:9849946-9850297	K562	blood:	n/a	n/a
8	BACH1	chr4:9806067-9806321	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr4:9885168-9885286	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr4:9814682-9815071	GM12878	blood:	n/a	n/a
11	BATF	chr4:9813621-9813815	GM12878	blood:	n/a	n/a
12	BATF	chr4:9809777-9810086	GM12878	blood:	n/a	n/a
13	BATF	chr4:9814742-9814999	GM12878	blood:	n/a	n/a
14	BCL11A	chr4:9814557-9814998	GM12878	blood:	n/a	n/a
15	BCL11A	chr4:9814677-9815008	GM12878	blood:	n/a	n/a
16	BCL11A	chr4:9809752-9810069	GM12878	blood:	n/a	n/a
17	BCL11A	chr4:9809742-9810117	GM12878	blood:	n/a	n/a
18	BCL11A	chr4:9851100-9851523	GM12878	blood:	n/a	n/a
19	BCL11A	chr4:9851148-9851550	GM12878	blood:	n/a	n/a
20	BCL3	chr4:9826836-9827129	GM12878	blood:	n/a	n/a
21	BHLHE40	chr4:9937928-9938023	K562	blood:	n/a	n/a
22	BHLHE40	chr4:9920641-9920828	K562	blood:	n/a	n/a
23	BHLHE40	chr4:9814583-9815072	GM12878	blood:	n/a	n/a
24	BHLHE40	chr4:9851061-9851588	GM12878	blood:	n/a	n/a
25	BHLHE40	chr4:9882590-9882646	K562	blood:	n/a	n/a
26	BHLHE40	chr4:9802635-9802910	GM12878	blood:	n/a	n/a
27	BHLHE40	chr4:9867363-9867483	K562	blood:	n/a	n/a
28	BHLHE40	chr4:9809778-9810107	GM12878	blood:	n/a	n/a
29	BHLHE40	chr4:9809308-9809346	GM12878	blood:	n/a	n/a
30	BHLHE40	chr4:9872224-9872359	K562	blood:	n/a	n/a
31	BRCA1	chr4:9829608-9829617	H1-hESC	embryonic stem cell:	n/a	n/a
32	BRCA1	chr4:9871086-9871272	GM12878	blood:	n/a	n/a
33	CCNT2	chr4:9895028-9895704	K562	blood:	n/a	n/a
34	CCNT2	chr4:9937760-9938130	K562	blood:	n/a	n/a
35	CEBPB	chr4:9954068-9954391	HepG2	liver:	n/a	chr4:9954213-9954224
36	CEBPB	chr4:9954066-9954414	HepG2	liver:	n/a	chr4:9954213-9954224
37	CEBPB	chr4:9849869-9850308	HCT-116	colon:	n/a	chr4:9850045-9850056 chr4:9850120-9850131
38	CEBPB	chr4:9876127-9876348	HepG2	liver:	n/a	chr4:9876241-9876252
39	CEBPB	chr4:9888675-9888963	HepG2	liver:	n/a	n/a
40	CEBPB	chr4:9849900-9850296	K562	blood:	n/a	chr4:9850045-9850056 chr4:9850120-9850131
41	CEBPB	chr4:9954135-9954305	HepG2	liver:	n/a	chr4:9954213-9954224
42	CEBPB	chr4:9927280-9927588	K562	blood:	n/a	n/a
43	CEBPB	chr4:9849824-9850326	HCT-116	colon:	n/a	chr4:9850045-9850056 chr4:9850120-9850131
44	CEBPB	chr4:9954030-9954437	MCF-7	breast:	n/a	chr4:9954213-9954224
45	CEBPB	chr4:9900383-9900669	K562	blood:	n/a	n/a
46	CEBPB	chr4:9849949-9850302	HepG2	liver:	n/a	chr4:9850045-9850056 chr4:9850120-9850131
47	CEBPB	chr4:9954045-9954390	K562	blood:	n/a	chr4:9954213-9954224
48	CEBPB	chr4:9849953-9850289	Hela-S3	cervix:	n/a	chr4:9850045-9850056 chr4:9850120-9850131
49	CEBPB	chr4:9900393-9900739	MCF-7	breast:	n/a	n/a
50	CEBPB	chr4:9849913-9850318	K562	blood:	n/a	chr4:9850045-9850056 chr4:9850120-9850131

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:9892887-9892937	ECC-1	luminal epithelium:	n/a
2	chr4:9892887-9892937	ECC-1	luminal epithelium:	n/a
3	chr4:9937674-9937724	NB4	blood:	n/a
4	chr4:9926439-9926489	HCT-116	colon:	n/a
5	chr4:9884128-9884178	HUVEC	blood vessel:	n/a
6	chr4:9884128-9884178	HRCEpiC	kidney:	n/a
7	chr4:9917839-9917889	LNCaP	prostate:	n/a
8	chr4:9940566-9940616	NT2-D1	testis:	n/a
9	chr4:9950643-9950693	NHDF-neo	bronchial:	n/a
10	chr4:9922462-9922512	HCF	heart:	n/a
11	chr4:9917839-9917889	HCT-116	colon:	n/a
12	chr4:9922462-9922512	HIPEpiC	eye:	n/a
13	chr4:9884128-9884178	CMK	blood:	n/a
14	chr4:9937674-9937724	BJ	skin:	n/a
15	chr4:9917839-9917889	ProgFib	skin:	n/a
16	chr4:9917839-9917889	HEK293	kidney:	embryo
17	chr4:9922462-9922512	RPTEC	kidney:	n/a
18	chr4:9950643-9950693	SK-N-MC	brain:	n/a
19	chr4:9892887-9892937	AG04450	lung:	fetal
20	chr4:9926439-9926489	IMR90	lung:	fetal
21	chr4:9950643-9950693	HRE	kidney:	n/a
22	chr4:9884128-9884178	RPTEC	kidney:	n/a
23	chr4:9892887-9892937	NH-A	brain:	n/a
24	chr4:9884128-9884178	AG09319	gingival:	n/a
25	chr4:9940566-9940616	RPTEC	kidney:	n/a
26	chr4:9940566-9940616	HRPEpiC	eye:	n/a
27	chr4:9940566-9940616	CMK	blood:	n/a
28	chr4:9884128-9884178	A549	lung:	n/a
29	chr4:9892887-9892937	Hela-S3	cervix:	n/a
30	chr4:9884128-9884178	AoSMC	blood vessel:	n/a
31	chr4:9937674-9937724	GM06990	blood:	n/a
32	chr4:9892887-9892937	ovcar-3	ovarian:	n/a
33	chr4:9884128-9884178	PANC-1	pancreas:	n/a
34	chr4:9917839-9917889	HUVEC	blood vessel:	n/a
35	chr4:9937674-9937724	MCF-7	breast:	n/a
36	chr4:9892887-9892937	HCPEpiC	choroid plexus:	n/a
37	chr4:9926439-9926489	HAEpiC	amniotic membrane:	n/a
38	chr4:9892887-9892937	SK-N-MC	brain:	n/a
39	chr4:9892887-9892937	NT2-D1	testis:	n/a
40	chr4:9884128-9884178	ovcar-3	ovarian:	n/a
41	chr4:9926439-9926489	Hela-S3	cervix:	n/a
42	chr4:9940566-9940616	HL-60	blood:	n/a
43	chr4:9884128-9884178	HIPEpiC	eye:	n/a
44	chr4:9940566-9940616	Jurkat	blood:	n/a
45	chr4:9884128-9884178	HEEpiC	esophagus:	n/a
46	chr4:9892887-9892937	HEEpiC	esophagus:	n/a
47	chr4:9884128-9884178	T-47D	breast:	n/a
48	chr4:9892887-9892937	HRCEpiC	kidney:	n/a
49	chr4:9922462-9922512	NHBE	bronchial:	n/a
50	chr4:9926439-9926489	PANC-1	pancreas:	n/a

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:9920436..9923282-chr4:9925910..9928355,2	MCF-7	breast:
2	chr4:9929005..9929948-chr4:10015148..10015863,2	MCF-7	breast:
3	chr4:9931454..9932279-chr4:10015120..10015668,2	MCF-7	breast:
4	chr4:9903730..9906582-chr4:9912941..9915065,2	MCF-7	breast:
5	chr4:9764792..9765537-chr4:9899989..9900954,5	MCF-7	breast:
6	chr4:9841356..9843538-chr4:9847251..9848935,2	K562	blood:
7	chr4:9865151..9867306-chr4:9868074..9870913,3	MCF-7	breast:
8	chr4:9841356..9843538-chr4:9847251..9848935,2	K562	blood:
9	chr4:9766848..9767385-chr4:9900038..9900893,4	MCF-7	breast:
10	chr4:9766226..9767390-chr4:9899951..9901032,8	MCF-7	breast:
11	chr4:9903730..9906582-chr4:9912941..9915065,2	MCF-7	breast:
12	chr4:9924672..9926796-chr4:10008145..10009788,2	MCF-7	breast:
13	chr4:9764866..9765415-chr4:9928949..9929492,2	MCF-7	breast:
14	chr4:9920609..9921128-chr4:10020066..10020974,2	K562	blood:
15	chr4:9865151..9867306-chr4:9868074..9870913,3	MCF-7	breast:
16	chr4:9931197..9931753-chr4:10016553..10017073,2	MCF-7	breast:
17	chr4:9827283..9829135-chr4:9829200..9831465,2	K562	blood:
18	chr4:9898528..9900449-chr4:10019179..10021130,2	MCF-7	breast:
19	chr4:9869830..9872812-chr4:9880250..9882960,2	K562	blood:
20	chr4:9869830..9872812-chr4:9880250..9882960,2	K562	blood:
21	chr4:9918331..9921142-chr4:10116868..10118418,2	MCF-7	breast:
22	chr4:9920436..9923282-chr4:9925910..9928355,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DRD5-1	chr4:9924438-9924574	ENSG00000249219.1
2	lnc-DRD5-13	chr4:9810799-9811038	NONHSAT095145
3	lnc-DRD5-13	chr4:9814207-9814604	NONHSAT095145
4	lnc-WDR1-12	chr4:9870401-9871383	NONHSAT095146
5	lnc-DRD5-13	chr4:9807330-9807762	NONHSAT095145
6	lnc-DRD5-1	chr4:9925400-9925770	ENSG00000249219.1
7	lnc-WDR1-12	chr4:9873428-9874487	NONHSAT095146

No data

Variant related genes	Relation type
ENSG00000249219	TF binding region
SLC2A9	TF binding region
ENSG00000249219	CpG island
SLC2A9	CpG island
ENSG00000223086	chromatin interactions
ENSG00000071127	chromatin interactions
ENSG00000109667	chromatin interactions

Extended variants
information (count: 6888 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:6888 , 50 per page) page: 1 2 3 4 5 6 7 ... 138

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs568305917	chr4:9802160-9802161	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs114685624	chr4:9802198-9802199	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs139034853	chr4:9802217-9802218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs569785632	chr4:9802222-9802223	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs13146942	chr4:9802225-9802226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs537163558	chr4:9802229-9802230	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs535185809	chr4:9802258-9802259	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs56139970	chr4:9802272-9802273	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs576801835	chr4:9802273-9802274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs574917458	chr4:9802282-9802283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs539027571	chr4:9802312-9802313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs190881945	chr4:9802344-9802345	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs76685428	chr4:9802355-9802356	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs386671543	chr4:9802366-9802367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs540106843	chr4:9802462-9802463	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs542382207	chr4:9802474-9802475	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs141934221	chr4:9802476-9802477	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs146309620	chr4:9802490-9802491	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs545893111	chr4:9802508-9802509	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs183053800	chr4:9802519-9802520	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs528081954	chr4:9802520-9802521	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs138191861	chr4:9802523-9802524	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs149591510	chr4:9802552-9802553	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs529195300	chr4:9802573-9802574	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs550325711	chr4:9802635-9802636	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs568694181	chr4:9802655-9802656	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs539273778	chr4:9802671-9802672	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs77574188	chr4:9802690-9802691	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs570894893	chr4:9802717-9802718	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs186850997	chr4:9802725-9802726	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs191239114	chr4:9802752-9802753	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs575045714	chr4:9802753-9802754	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs148664254	chr4:9802758-9802759	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs183395717	chr4:9802824-9802825	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs1519097	chr4:9802853-9802854	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs577451006	chr4:9802866-9802867	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs546462141	chr4:9802877-9802878	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs187884463	chr4:9802958-9802959	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs372934462	chr4:9802977-9802978	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs540197256	chr4:9803009-9803010	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs573845146	chr4:9803022-9803023	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs561545514	chr4:9803040-9803041	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs191466118	chr4:9803046-9803047	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs541035736	chr4:9803074-9803075	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs182171789	chr4:9803095-9803096	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs544077843	chr4:9803096-9803097	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs116533216	chr4:9803107-9803108	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs563749903	chr4:9803136-9803137	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs532949613	chr4:9803180-9803181	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs35730387	chr4:9803184-9803185	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Sezary syndrome	18413736	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
early-passage human iPS cells	21368824	CNVD
Sinonasal adenocarcinoma	21360264	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Ependymoma	20639864	CNVD
Breast cancer	17142309	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Glioma	20126413	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Obesity	21131291	CNVD
Schizophrenia	23813976	CNVD
Hepatocellular carcinoma	22267523	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1007 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:9794600-9805800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr4:9794600-9812600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr4:9797200-9806400	Weak transcription	HepG2	liver
4	chr4:9798800-9815000	Weak transcription	Lung	lung
5	chr4:9799200-9819600	Weak transcription	HMEC	breast
6	chr4:9802400-9803400	Enhancers	Thymus	Thymus
7	chr4:9802600-9803800	Enhancers	Fetal Thymus	thymus
8	chr4:9803200-9803800	Enhancers	Fetal Muscle Trunk	muscle
9	chr4:9803200-9803800	Enhancers	Fetal Muscle Leg	muscle
10	chr4:9804600-9808800	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr4:9805800-9807000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
12	chr4:9806000-9806800	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr4:9806000-9807000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr4:9806200-9806600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr4:9806200-9806800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr4:9806200-9807000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr4:9806200-9821200	Weak transcription	Fetal Intestine Small	intestine
18	chr4:9806400-9807200	Enhancers	Placenta	Placenta
19	chr4:9806400-9807400	Strong transcription	HepG2	liver
20	chr4:9806600-9807000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr4:9806800-9807000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr4:9807000-9808800	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr4:9807000-9809400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr4:9807000-9810400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr4:9807000-9819800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr4:9807200-9807600	Weak transcription	Placenta	Placenta
27	chr4:9807400-9808600	Weak transcription	HepG2	liver
28	chr4:9807600-9808200	Enhancers	Placenta	Placenta
29	chr4:9808200-9809600	ZNF genes & repeats	Placenta	Placenta
30	chr4:9808200-9832000	Weak transcription	Duodenum Mucosa	Duodenum
31	chr4:9808400-9809400	Enhancers	Fetal Stomach	stomach
32	chr4:9808600-9813400	Strong transcription	HepG2	liver
33	chr4:9808800-9810800	Strong transcription	Primary monocytes fromperipheralblood	blood
34	chr4:9808800-9813200	Strong transcription	Monocytes-CD14+_RO01746	blood
35	chr4:9808800-9834400	Weak transcription	NHEK	skin
36	chr4:9809400-9810000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr4:9809600-9810000	Enhancers	Fetal Muscle Trunk	muscle
38	chr4:9809600-9810000	Enhancers	Placenta	Placenta
39	chr4:9809600-9810400	Enhancers	Fetal Muscle Leg	muscle
40	chr4:9810000-9830600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr4:9810400-9811000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
42	chr4:9810800-9811600	Weak transcription	Primary monocytes fromperipheralblood	blood
43	chr4:9811000-9827000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chr4:9811600-9813000	Strong transcription	Primary monocytes fromperipheralblood	blood
45	chr4:9812600-9813600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr4:9813000-9813800	Weak transcription	Primary monocytes fromperipheralblood	blood
47	chr4:9813000-9814600	Enhancers	Primary neutrophils fromperipheralblood	blood
48	chr4:9813200-9813400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr4:9813200-9816000	Weak transcription	Monocytes-CD14+_RO01746	blood
50	chr4:9813400-9814200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links