Variant report

Variant	nsv1008184
Chromosome Location	chr3:20315110-20381006
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:360)
CpG islands
(count:122)
Chromatin interactive
region (count:40)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:360 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:20378141-20378394	K562	blood:	n/a	n/a
2	ARID3A	chr3:20368591-20368761	K562	blood:	n/a	n/a
3	ARID3A	chr3:20366598-20367214	K562	blood:	n/a	n/a
4	ARID3A	chr3:20362800-20363279	K562	blood:	n/a	n/a
5	ARID3A	chr3:20361861-20362463	HepG2	liver:	n/a	n/a
6	ARID3A	chr3:20364750-20365312	K562	blood:	n/a	n/a
7	ARID3A	chr3:20363620-20364094	K562	blood:	n/a	chr3:20363734-20363750
8	ARID3A	chr3:20371522-20371864	K562	blood:	n/a	n/a
9	ATF1	chr3:20366606-20366910	K562	blood:	n/a	n/a
10	ATF1	chr3:20364790-20365451	K562	blood:	n/a	n/a
11	ATF1	chr3:20346503-20346616	K562	blood:	n/a	n/a
12	BACH1	chr3:20366536-20366578	K562	blood:	n/a	n/a
13	BACH1	chr3:20363669-20363903	K562	blood:	n/a	n/a
14	BCL11A	chr3:20371437-20371693	H1-hESC	embryonic stem cell:	n/a	n/a
15	BHLHE40	chr3:20366210-20366396	K562	blood:	n/a	n/a
16	BHLHE40	chr3:20371536-20371904	K562	blood:	n/a	n/a
17	BHLHE40	chr3:20364697-20365365	K562	blood:	n/a	n/a
18	BHLHE40	chr3:20361903-20362390	HepG2	liver:	n/a	n/a
19	BHLHE40	chr3:20355407-20355580	A549	lung:	n/a	n/a
20	CBX3	chr3:20364770-20365367	K562	blood:	n/a	n/a
21	CBX3	chr3:20347626-20347963	K562	blood:	n/a	n/a
22	CBX3	chr3:20347694-20347925	K562	blood:	n/a	n/a
23	CBX3	chr3:20346385-20346769	K562	blood:	n/a	n/a
24	CBX3	chr3:20324264-20324647	K562	blood:	n/a	n/a
25	CBX3	chr3:20324344-20324598	K562	blood:	n/a	n/a
26	CBX3	chr3:20366551-20367349	K562	blood:	n/a	n/a
27	CCNT2	chr3:20371431-20371945	K562	blood:	n/a	n/a
28	CCNT2	chr3:20361414-20361646	K562	blood:	n/a	n/a
29	CCNT2	chr3:20372976-20373098	K562	blood:	n/a	n/a
30	CCNT2	chr3:20366682-20366882	K562	blood:	n/a	n/a
31	CCNT2	chr3:20362758-20363417	K562	blood:	n/a	chr3:20363078-20363098
32	CCNT2	chr3:20364768-20365575	K562	blood:	n/a	n/a
33	CEBPB	chr3:20348990-20349167	K562	blood:	n/a	chr3:20349081-20349092 chr3:20349082-20349091 chr3:20349080-20349093
34	CEBPB	chr3:20339706-20339888	K562	blood:	n/a	n/a
35	CEBPB	chr3:20356761-20356776	K562	blood:	n/a	n/a
36	CEBPB	chr3:20364690-20365466	K562	blood:	n/a	chr3:20364966-20364977
37	CEBPB	chr3:20364589-20365397	K562	blood:	n/a	chr3:20364637-20364646 chr3:20364637-20364648 chr3:20364966-20364977
38	CEBPB	chr3:20325107-20325384	HepG2	liver:	n/a	chr3:20325251-20325264 chr3:20325252-20325263 chr3:20325116-20325127 chr3:20325251-20325262 chr3:20325251-20325264 chr3:20325251-20325264
39	CEBPB	chr3:20325166-20325366	K562	blood:	n/a	chr3:20325251-20325264 chr3:20325252-20325263 chr3:20325251-20325262 chr3:20325251-20325264 chr3:20325251-20325264
40	CEBPB	chr3:20366683-20367083	K562	blood:	n/a	n/a
41	CEBPB	chr3:20370875-20370925	K562	blood:	n/a	n/a
42	CEBPB	chr3:20363703-20363988	K562	blood:	n/a	n/a
43	CEBPB	chr3:20348930-20349432	HepG2	liver:	n/a	chr3:20349081-20349092 chr3:20349082-20349091 chr3:20349080-20349093
44	CEBPB	chr3:20369435-20369698	K562	blood:	n/a	chr3:20369583-20369594
45	CEBPB	chr3:20352090-20352435	K562	blood:	n/a	n/a
46	CEBPB	chr3:20348981-20349452	A549	lung:	n/a	chr3:20349081-20349092 chr3:20349082-20349091 chr3:20349080-20349093
47	CEBPB	chr3:20364676-20365125	HepG2	liver:	n/a	chr3:20364966-20364977
48	CEBPB	chr3:20359149-20359498	HepG2	liver:	n/a	n/a
49	CEBPB	chr3:20364787-20365122	K562	blood:	n/a	chr3:20364966-20364977
50	CEBPB	chr3:20359248-20359395	HepG2	liver:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:20321584-20321634	ECC-1	luminal epithelium:	n/a
2	chr3:20321584-20321634	SAEC	small airway:	n/a
3	chr3:20371290-20371340	CMK	blood:	n/a
4	chr3:20321584-20321634	LNCaP	prostate:	n/a
5	chr3:20321584-20321634	GM19239	blood:	n/a
6	chr3:20321584-20321634	NHDF-neo	bronchial:	n/a
7	chr3:20321584-20321634	U87	brain:	n/a
8	chr3:20371290-20371340	SKMC	muscle:	n/a
9	chr3:20371290-20371340	HCM	heart:	n/a
10	chr3:20321584-20321634	GM06990	blood:	n/a
11	chr3:20321584-20321634	HepG2	liver:	n/a
12	chr3:20321584-20321634	BJ	skin:	n/a
13	chr3:20371290-20371340	HRE	kidney:	n/a
14	chr3:20321584-20321634	AG09309	skin:	n/a
15	chr3:20371290-20371340	MCF10A-Er-Src	breast:	n/a
16	chr3:20371290-20371340	NT2-D1	testis:	n/a
17	chr3:20321584-20321634	HEEpiC	esophagus:	n/a
18	chr3:20321584-20321634	Jurkat	blood:	n/a
19	chr3:20321584-20321634	IMR90	lung:	fetal
20	chr3:20371290-20371340	IMR90	lung:	fetal
21	chr3:20371290-20371340	H1-hESC	embryonic stem cell:	embryo
22	chr3:20371290-20371340	AoSMC	blood vessel:	n/a
23	chr3:20321584-20321634	AG10803	skin:	n/a
24	chr3:20321584-20321634	HMEC	breast:	n/a
25	chr3:20321584-20321634	HRE	kidney:	n/a
26	chr3:20371290-20371340	HAEpiC	amniotic membrane:	n/a
27	chr3:20371290-20371340	A549	lung:	n/a
28	chr3:20371290-20371340	NH-A	brain:	n/a
29	chr3:20371290-20371340	SK-N-MC	brain:	n/a
30	chr3:20371290-20371340	ECC-1	luminal epithelium:	n/a
31	chr3:20321584-20321634	AG09319	gingival:	n/a
32	chr3:20321584-20321634	HIPEpiC	eye:	n/a
33	chr3:20371290-20371340	HIPEpiC	eye:	n/a
34	chr3:20371290-20371340	GM06990	blood:	n/a
35	chr3:20371290-20371340	HNPCEpiC	eye:	n/a
36	chr3:20371290-20371340	AG04449	skin:	fetal
37	chr3:20321584-20321634	SK-N-SH_RA	brain:	n/a
38	chr3:20321584-20321634	BE2_C	brain:	n/a
39	chr3:20321584-20321634	Hela-S3	cervix:	n/a
40	chr3:20371290-20371340	BE2_C	brain:	n/a
41	chr3:20371290-20371340	HepG2	liver:	n/a
42	chr3:20321584-20321634	HNPCEpiC	eye:	n/a
43	chr3:20321584-20321634	K562	blood:	n/a
44	chr3:20371290-20371340	GM12892	blood:	n/a
45	chr3:20321584-20321634	AG04449	skin:	fetal
46	chr3:20321584-20321634	SKMC	muscle:	n/a
47	chr3:20321584-20321634	NHBE	bronchial:	n/a
48	chr3:20321584-20321634	HL-60	blood:	n/a
49	chr3:20371290-20371340	SAEC	small airway:	n/a
50	chr3:20321584-20321634	PFSK-1	brain:	n/a

(count:40 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:20316601..20319465-chr3:20319672..20321888,2	K562	blood:
2	chr3:20361855..20364563-chr3:20364654..20366618,2	K562	blood:
3	chr3:20370553..20372483-chr3:20373507..20376475,2	K562	blood:
4	chr3:20368039..20370603-chr3:20372170..20374733,2	K562	blood:
5	chr3:20346246..20348359-chr3:20361269..20362788,2	K562	blood:
6	chr3:20333199..20337962-chr3:20339317..20343120,4	K562	blood:
7	chr3:20365682..20367813-chr3:20369993..20373801,3	K562	blood:
8	chr3:20335611..20337962-chr3:20339317..20341435,2	K562	blood:
9	chr3:20346246..20348359-chr3:20361269..20362788,2	K562	blood:
10	chr3:20369262..20370826-chr3:20371574..20373222,2	K562	blood:
11	chr3:20365682..20367813-chr3:20369993..20373801,3	K562	blood:
12	chr3:20358467..20362257-chr3:20366935..20370675,4	K562	blood:
13	chr3:20329415..20331770-chr3:20333391..20336112,2	K562	blood:
14	chr3:20358544..20361265-chr3:20365566..20368705,3	K562	blood:
15	chr3:20368039..20370603-chr3:20372170..20374733,2	K562	blood:
16	chr3:20329415..20331770-chr3:20333391..20336112,2	K562	blood:
17	chr3:20364762..20367629-chr3:20378813..20381206,2	K562	blood:
18	chr3:20342900..20345810-chr3:20347041..20349478,2	K562	blood:
19	chr3:20363426..20365605-chr3:20367558..20369154,2	K562	blood:
20	chr3:20342900..20345810-chr3:20347041..20349478,2	K562	blood:
21	chr3:20358544..20361265-chr3:20365566..20368705,3	K562	blood:
22	chr3:20370553..20372483-chr3:20373507..20376475,2	K562	blood:
23	chr3:20369262..20370826-chr3:20371574..20373222,2	K562	blood:
24	chr3:20363426..20365605-chr3:20367558..20369154,2	K562	blood:
25	chr3:20316601..20319465-chr3:20319672..20321888,2	K562	blood:
26	chr3:20375934..20377835-chr3:20379796..20382067,2	MCF-7	breast:
27	chr3:20248922..20251335-chr3:20323167..20325698,2	K562	blood:
28	chr3:20320265..20323041-chr3:20324824..20326695,2	K562	blood:
29	chr3:20364762..20367629-chr3:20378813..20381206,2	K562	blood:
30	chr3:20352341..20352841-chr6:144261197..144261734,2	MCF-7	breast:
31	chr3:20344022..20346742-chr3:20354498..20357355,2	K562	blood:
32	chr3:20335611..20337962-chr3:20339317..20341435,2	K562	blood:
33	chr3:20378280..20380658-chr3:21571258..21574044,2	K562	blood:
34	chr3:20361855..20364563-chr3:20364654..20366618,2	K562	blood:
35	chr3:20320265..20323041-chr3:20324824..20326695,2	K562	blood:
36	chr3:20344022..20346742-chr3:20354498..20357355,2	K562	blood:
37	chr3:20333199..20337962-chr3:20339317..20343120,4	K562	blood:
38	chr3:20358467..20362257-chr3:20366935..20370675,4	K562	blood:
39	chr3:20225982..20227551-chr3:20349845..20352725,2	K562	blood:
40	chr3:20375934..20377835-chr3:20379796..20382067,2	MCF-7	breast:

No data

Variant related genes	Relation type
RNU6-822P	TF binding region
ENSG00000231304	TF binding region
RNU6-822P	CpG island
ENSG00000231304	CpG island

Extended variants
information (count: 2171 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:2171 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs560333968	chr3:20316643-20316644	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs145294059	chr3:20316679-20316680	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs185395373	chr3:20316794-20316795	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs536442013	chr3:20316802-20316803	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs6762007	chr3:20316816-20316817	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs575203525	chr3:20316847-20316848	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs190106151	chr3:20316849-20316850	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs557006890	chr3:20316920-20316921	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs369515538	chr3:20316955-20316956	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs569111190	chr3:20316990-20316991	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs539271573	chr3:20317016-20317017	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs4857931	chr3:20317099-20317100	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs573011181	chr3:20317167-20317168	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs4857932	chr3:20317170-20317171	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs115458302	chr3:20317171-20317172	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs4858171	chr3:20317181-20317182	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs137885146	chr3:20317182-20317183	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs563068989	chr3:20317237-20317238	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs140755397	chr3:20317238-20317239	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs9853045	chr3:20317242-20317243	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs182711608	chr3:20317245-20317246	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs373031239	chr3:20317278-20317279	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs113754623	chr3:20317309-20317310	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs148158862	chr3:20317313-20317314	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs141960254	chr3:20317315-20317316	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs4857933	chr3:20317338-20317339	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs138856442	chr3:20317342-20317343	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs111319740	chr3:20317349-20317350	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs112438821	chr3:20317355-20317356	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs147473562	chr3:20317379-20317380	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs139888964	chr3:20317385-20317386	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs113625606	chr3:20317408-20317409	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs187349055	chr3:20317414-20317415	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs190812834	chr3:20317425-20317426	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs539706520	chr3:20317448-20317449	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs566379849	chr3:20317453-20317454	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs144175074	chr3:20317462-20317463	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs555615575	chr3:20317469-20317470	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs574060252	chr3:20317480-20317481	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs113154164	chr3:20317492-20317493	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs113557981	chr3:20317506-20317507	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs112700239	chr3:20317532-20317533	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs111396804	chr3:20317547-20317548	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs370095503	chr3:20317563-20317564	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs183818602	chr3:20317565-20317566	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs578250179	chr3:20317571-20317572	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs140879167	chr3:20317595-20317596	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs545760675	chr3:20317609-20317610	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs560757961	chr3:20317610-20317611	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs572711932	chr3:20317621-20317622	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Neuroblastoma	18923191	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
lymphocytic leukemia	21291569	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Esophageal cancer	20955586	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Squamous cell cancer	20885788	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Breast cancer	17133270	CNVD
Developmental delay	21147756	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:176 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:20316600-20318600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:20317600-20329000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr3:20317800-20318200	Enhancers	Primary T helper naive cells from peripheral blood	blood
4	chr3:20318600-20319400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr3:20319400-20319800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr3:20319400-20320400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr3:20319800-20320800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr3:20320400-20322400	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr3:20320400-20322600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr3:20320800-20322200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr3:20321600-20322200	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr3:20321600-20322200	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr3:20321600-20322200	Enhancers	Primary T helper cells fromperipheralblood	blood
14	chr3:20321600-20322200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr3:20321600-20322400	Enhancers	Primary B cells from peripheral blood	blood
16	chr3:20321600-20322400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr3:20321800-20322000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr3:20321800-20322200	Enhancers	Primary T cells fromperipheralblood	blood
19	chr3:20322000-20329800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr3:20322200-20322600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr3:20322200-20322600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr3:20322600-20322800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr3:20322600-20325800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr3:20322800-20323000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr3:20324000-20324800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
26	chr3:20325600-20325800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
27	chr3:20325600-20325800	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr3:20325800-20330200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr3:20326200-20331000	Weak transcription	Pancreas	Pancrea
30	chr3:20327400-20331000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr3:20328800-20331200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
32	chr3:20329000-20329800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
33	chr3:20329000-20330200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
34	chr3:20329200-20329600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
35	chr3:20331000-20331200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr3:20331000-20331200	ZNF genes & repeats	Pancreas	Pancrea
37	chr3:20336600-20337000	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
38	chr3:20337000-20344800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
39	chr3:20344000-20344800	Enhancers	Fetal Heart	heart
40	chr3:20344200-20345000	Enhancers	Fetal Brain Male	brain
41	chr3:20347000-20347200	Active TSS	K562	blood
42	chr3:20347200-20347400	Flanking Active TSS	K562	blood
43	chr3:20347400-20347800	Enhancers	K562	blood
44	chr3:20349000-20349400	Enhancers	Primary monocytes fromperipheralblood	blood
45	chr3:20350600-20351200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr3:20351200-20351800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr3:20351200-20353400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr3:20351600-20353000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr3:20351800-20352600	Enhancers	Adipose Nuclei	Adipose
50	chr3:20351800-20352800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links