Variant report

Variant	nsv1008586
Chromosome Location	chr3:60070974-60258108
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:715)
CpG islands
(count:122)
Chromatin interactive
region (count:45)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:715 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:60254542-60255635	K562	blood:	n/a	n/a
2	ARID3A	chr3:60241988-60242170	K562	blood:	n/a	n/a
3	ARID3A	chr3:60251876-60252792	K562	blood:	n/a	n/a
4	ARID3A	chr3:60089333-60089791	K562	blood:	n/a	n/a
5	ARID3A	chr3:60236266-60236623	K562	blood:	n/a	n/a
6	ARID3A	chr3:60080880-60080974	K562	blood:	n/a	n/a
7	ARID3A	chr3:60228798-60230202	K562	blood:	n/a	n/a
8	ATF1	chr3:60175649-60176121	K562	blood:	n/a	n/a
9	ATF1	chr3:60255066-60255423	K562	blood:	n/a	n/a
10	ATF1	chr3:60072608-60072940	K562	blood:	n/a	n/a
11	ATF2	chr3:60072552-60072929	GM12878	blood:	n/a	n/a
12	ATF2	chr3:60175754-60176100	GM12878	blood:	n/a	n/a
13	ATF2	chr3:60072548-60072961	GM12878	blood:	n/a	n/a
14	ATF3	chr3:60072525-60072862	K562	blood:	n/a	n/a
15	BACH1	chr3:60238886-60239061	K562	blood:	n/a	n/a
16	BACH1	chr3:60241691-60241802	K562	blood:	n/a	n/a
17	BACH1	chr3:60247867-60247880	K562	blood:	n/a	n/a
18	BATF	chr3:60125935-60126267	GM12878	blood:	n/a	n/a
19	BATF	chr3:60178356-60178622	GM12878	blood:	n/a	n/a
20	BATF	chr3:60211442-60211893	GM12878	blood:	n/a	chr3:60211654-60211663
21	BATF	chr3:60211557-60211749	GM12878	blood:	n/a	chr3:60211654-60211663
22	BATF	chr3:60072622-60072863	GM12878	blood:	n/a	chr3:60072719-60072730 chr3:60072749-60072760
23	BATF	chr3:60175866-60176100	GM12878	blood:	n/a	chr3:60175916-60175929
24	BATF	chr3:60178290-60178695	GM12878	blood:	n/a	n/a
25	BATF	chr3:60072565-60072906	GM12878	blood:	n/a	chr3:60072719-60072730 chr3:60072749-60072760
26	BCL11A	chr3:60178284-60178674	GM12878	blood:	n/a	n/a
27	BCL11A	chr3:60178405-60178610	GM12878	blood:	n/a	n/a
28	BCL3	chr3:60178326-60178686	GM12878	blood:	n/a	n/a
29	BCL3	chr3:60211593-60211929	GM12878	blood:	n/a	n/a
30	BHLHE40	chr3:60218420-60218449	K562	blood:	n/a	n/a
31	BHLHE40	chr3:60255569-60256068	K562	blood:	n/a	n/a
32	BHLHE40	chr3:60072788-60072959	K562	blood:	n/a	n/a
33	CBX3	chr3:60072440-60073038	HCT-116	colon:	n/a	n/a
34	CCNT2	chr3:60255085-60255515	K562	blood:	n/a	n/a
35	CCNT2	chr3:60229234-60229536	K562	blood:	n/a	n/a
36	CEBPB	chr3:60091161-60091440	HepG2	liver:	n/a	chr3:60091285-60091296
37	CEBPB	chr3:60252053-60252570	K562	blood:	n/a	n/a
38	CEBPB	chr3:60184852-60185115	HepG2	liver:	n/a	n/a
39	CEBPB	chr3:60122391-60122573	H1-hESC	embryonic stem cell:	n/a	n/a
40	CEBPB	chr3:60205570-60205645	K562	blood:	n/a	n/a
41	CEBPB	chr3:60252214-60252526	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr3:60235962-60236296	IMR90	lung:	n/a	chr3:60236120-60236131 chr3:60236118-60236129
43	CEBPB	chr3:60252121-60252552	HepG2	liver:	n/a	n/a
44	CEBPB	chr3:60255032-60255484	K562	blood:	n/a	n/a
45	CEBPB	chr3:60160367-60160597	A549	lung:	n/a	chr3:60160461-60160472
46	CEBPB	chr3:60255084-60255497	K562	blood:	n/a	n/a
47	CEBPB	chr3:60087462-60087710	HepG2	liver:	n/a	n/a
48	CEBPB	chr3:60252195-60252523	A549	lung:	n/a	n/a
49	CEBPB	chr3:60170978-60171261	HepG2	liver:	n/a	chr3:60171089-60171100
50	CEBPB	chr3:60252127-60252448	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:60133085-60133135	SAEC	small airway:	n/a
2	chr3:60133085-60133135	BJ	skin:	n/a
3	chr3:60226328-60226378	AG09309	skin:	n/a
4	chr3:60133085-60133135	HL-60	blood:	n/a
5	chr3:60133085-60133135	GM19239	blood:	n/a
6	chr3:60133085-60133135	CMK	blood:	n/a
7	chr3:60133085-60133135	ovcar-3	ovarian:	n/a
8	chr3:60226328-60226378	GM19239	blood:	n/a
9	chr3:60226328-60226378	ECC-1	luminal epithelium:	n/a
10	chr3:60226328-60226378	AoSMC	blood vessel:	n/a
11	chr3:60226328-60226378	GM06990	blood:	n/a
12	chr3:60226328-60226378	HAEpiC	amniotic membrane:	n/a
13	chr3:60133085-60133135	MCF10A-Er-Src	breast:	n/a
14	chr3:60226328-60226378	A549	lung:	n/a
15	chr3:60226328-60226378	Caco-2	colon:	n/a
16	chr3:60226328-60226378	HRE	kidney:	n/a
17	chr3:60133085-60133135	SK-N-SH_RA	brain:	n/a
18	chr3:60226328-60226378	HPAEpiC	pulmonary alveolar:	n/a
19	chr3:60226328-60226378	BE2_C	brain:	n/a
20	chr3:60133085-60133135	PFSK-1	brain:	n/a
21	chr3:60133085-60133135	NB4	blood:	n/a
22	chr3:60226328-60226378	HCT-116	colon:	n/a
23	chr3:60226328-60226378	HUVEC	blood vessel:	n/a
24	chr3:60133085-60133135	SK-N-SH	brain:	n/a
25	chr3:60133085-60133135	ECC-1	luminal epithelium:	n/a
26	chr3:60133085-60133135	PrEC	prostate:	n/a
27	chr3:60133085-60133135	Hepatocyte	liver:	n/a
28	chr3:60226328-60226378	AG04450	lung:	fetal
29	chr3:60133085-60133135	HCF	heart:	n/a
30	chr3:60226328-60226378	NT2-D1	testis:	n/a
31	chr3:60226328-60226378	AG09319	gingival:	n/a
32	chr3:60133085-60133135	AG10803	skin:	n/a
33	chr3:60133085-60133135	HUVEC	blood vessel:	n/a
34	chr3:60133085-60133135	Jurkat	blood:	n/a
35	chr3:60226328-60226378	Hepatocyte	liver:	n/a
36	chr3:60133085-60133135	HCM	heart:	n/a
37	chr3:60133085-60133135	HRE	kidney:	n/a
38	chr3:60133085-60133135	U87	brain:	n/a
39	chr3:60133085-60133135	HIPEpiC	eye:	n/a
40	chr3:60226328-60226378	HEEpiC	esophagus:	n/a
41	chr3:60226328-60226378	K562	blood:	n/a
42	chr3:60133085-60133135	Caco-2	colon:	n/a
43	chr3:60133085-60133135	HEK293	kidney:	embryo
44	chr3:60226328-60226378	NHDF-neo	bronchial:	n/a
45	chr3:60226328-60226378	SK-N-SH_RA	brain:	n/a
46	chr3:60133085-60133135	HNPCEpiC	eye:	n/a
47	chr3:60226328-60226378	SAEC	small airway:	n/a
48	chr3:60226328-60226378	BJ	skin:	n/a
49	chr3:60226328-60226378	HRCEpiC	kidney:	n/a
50	chr3:60133085-60133135	HCT-116	colon:	n/a

(count:45 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:60255084..60257458-chr3:60258706..60260675,3	K562	blood:
2	chr3:60165952..60167759-chr3:60170117..60173099,2	K562	blood:
3	chr3:60183906..60185619-chr3:60186648..60189161,2	K562	blood:
4	chr3:60101310..60104205-chr3:60104357..60107292,2	K562	blood:
5	chr3:60251080..60254500-chr3:60254648..60256843,3	K562	blood:
6	chr3:60251080..60254500-chr3:60254648..60256843,3	K562	blood:
7	chr3:60253037..60257484-chr3:60258010..60262494,9	K562	blood:
8	chr3:60201561..60203293-chr3:60258409..60260445,2	K562	blood:
9	chr3:60238823..60240958-chr3:60247675..60249888,2	K562	blood:
10	chr3:60248856..60251161-chr3:60252178..60254260,3	K562	blood:
11	chr3:60169452..60171383-chr3:60172881..60175585,3	K562	blood:
12	chr3:60092867..60094612-chr3:60094796..60097247,2	K562	blood:
13	chr3:60227860..60230033-chr3:60233057..60236236,5	K562	blood:
14	chr3:60216976..60218581-chr3:60221614..60223794,2	K562	blood:
15	chr3:60238823..60240958-chr3:60247675..60249888,2	K562	blood:
16	chr3:60165952..60167759-chr3:60170117..60173099,2	K562	blood:
17	chr3:60243402..60246307-chr3:60248980..60251582,2	K562	blood:
18	chr3:59988215..59988997-chr3:60152321..60153153,2	MCF-7	breast:
19	chr3:60216976..60218581-chr3:60221614..60223794,2	K562	blood:
20	chr3:60233213..60236039-chr3:60237445..60240033,2	K562	blood:
21	chr3:60232635..60234409-chr3:60265559..60267834,2	K562	blood:
22	chr3:60233213..60236039-chr3:60237445..60240033,2	K562	blood:
23	chr3:60244130..60245681-chr3:60258765..60261150,2	K562	blood:
24	chr3:60183906..60185619-chr3:60186648..60189161,2	K562	blood:
25	chr3:60200174..60203052-chr3:60295659..60297420,2	K562	blood:
26	chr3:60248856..60251161-chr3:60252178..60254260,3	K562	blood:
27	chr3:60253037..60257484-chr3:60258010..60262494,9	K562	blood:
28	chr3:60243402..60246307-chr3:60248980..60251582,2	K562	blood:
29	chr3:60120417..60123350-chr3:60125419..60128034,2	K562	blood:
30	chr3:60250531..60257484-chr3:60260695..60265801,11	K562	blood:
31	chr3:60120417..60123350-chr3:60125419..60128034,2	K562	blood:
32	chr3:60227860..60230033-chr3:60233057..60236236,5	K562	blood:
33	chr3:60234763..60239313-chr3:60259101..60264028,5	K562	blood:
34	chr3:60256070..60258308-chr3:60290805..60292864,2	K562	blood:
35	chr3:60222812..60224764-chr3:60226709..60229125,2	K562	blood:
36	chr3:60187999..60188742-chr3:60417102..60417817,2	MCF-7	breast:
37	chr3:60222812..60224764-chr3:60226709..60229125,2	K562	blood:
38	chr3:60248856..60251063-chr3:60252178..60253698,2	K562	blood:
39	chr3:60251900..60257769-chr3:60262692..60266340,5	K562	blood:
40	chr3:60244807..60248517-chr3:60249578..60252504,4	K562	blood:
41	chr3:60101310..60104205-chr3:60104357..60107292,2	K562	blood:
42	chr3:60244807..60248517-chr3:60249578..60252504,4	K562	blood:
43	chr3:60248856..60251063-chr3:60252178..60253698,2	K562	blood:
44	chr3:60169452..60171383-chr3:60172881..60175585,3	K562	blood:
45	chr3:60092867..60094612-chr3:60094796..60097247,2	K562	blood:

No data

Variant related genes	Relation type
FHIT	TF binding region
FHIT	CpG island

Extended variants
information (count: 8686 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:8686 , 50 per page) page: 1 2 3 4 5 6 7 ... 174

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs561694388	chr3:60070981-60070982	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs148586628	chr3:60071000-60071001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs545093185	chr3:60071040-60071041	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs565835352	chr3:60071051-60071052	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs2361335	chr3:60071079-60071080	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs181196493	chr3:60071080-60071081	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs570151516	chr3:60071081-60071082	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs185193842	chr3:60071116-60071117	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs190729547	chr3:60071125-60071126	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs17325940	chr3:60071129-60071130	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs986651	chr3:60071169-60071170	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs142960711	chr3:60071187-60071188	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs182441416	chr3:60071193-60071194	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs17062124	chr3:60071202-60071203	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs545249924	chr3:60071221-60071222	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs139857992	chr3:60071226-60071227	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs575728931	chr3:60071244-60071245	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs543017439	chr3:60071275-60071276	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs538082534	chr3:60071278-60071279	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs111775215	chr3:60071289-60071290	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs541289597	chr3:60071291-60071292	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs374107156	chr3:60071295-60071296	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs187061886	chr3:60071342-60071343	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs533184972	chr3:60071355-60071356	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs144768412	chr3:60071359-60071360	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs115398670	chr3:60071379-60071380	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs367653741	chr3:60071389-60071390	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs549410147	chr3:60071404-60071405	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs567618281	chr3:60071443-60071444	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs535029964	chr3:60071466-60071467	Weak transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs147900615	chr3:60071542-60071543	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs571832566	chr3:60071612-60071613	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs539268228	chr3:60071629-60071630	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs557085137	chr3:60071636-60071637	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs11918446	chr3:60071644-60071645	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs542127215	chr3:60071645-60071646	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs114669052	chr3:60071652-60071653	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs113257233	chr3:60071671-60071672	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs532794620	chr3:60071705-60071706	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs554962876	chr3:60071731-60071732	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs573606811	chr3:60071749-60071750	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs191866715	chr3:60071760-60071761	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs182877526	chr3:60071764-60071765	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs577860030	chr3:60071771-60071772	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs545228969	chr3:60071790-60071791	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs563434277	chr3:60071803-60071804	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs531044383	chr3:60071807-60071808	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs187486357	chr3:60071812-60071813	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs549472126	chr3:60071830-60071831	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs561204341	chr3:60071836-60071837	Weak transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	19490591	CNVD
Autism	18414403	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-small cell lung cancer	20864512	CNVD
Metastatic melanoma	17975146	CNVD
Cancer	18162546	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Urothelial cell carcinoma	18451213	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Colorectal cancer	16272173	CNVD
Mental retardation	17847001	CNVD
Neuroticism	17667963	CNVD
Squamous cell cancer	19047905	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Cancer	20164920	CNVD
Schizophrenia	23813976	CNVD
Autism	22102821	CNVD
Prostate cancer	19363497	CNVD
Malaria	21533027	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Colorectal cancer	21518781	CNVD
Esophageal cancer	21518781	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Glioblastoma multiforme	21569311	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Schizophrenia	20967226	CNVD

Chromatin state (count:612 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60067200-60072400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr3:60067400-60072800	Weak transcription	Stomach Mucosa	stomach
3	chr3:60068000-60072200	Weak transcription	Fetal Thymus	thymus
4	chr3:60068000-60072400	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr3:60068400-60072600	Weak transcription	Thymus	Thymus
6	chr3:60068600-60072800	Weak transcription	Primary T helper cells fromperipheralblood	blood
7	chr3:60068600-60075800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr3:60068800-60072600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr3:60069200-60072400	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr3:60069200-60072800	Weak transcription	Psoas Muscle	Psoas
11	chr3:60070000-60072200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
12	chr3:60070400-60071200	Enhancers	Dnd41	blood
13	chr3:60071200-60072200	ZNF genes & repeats	Dnd41	blood
14	chr3:60071800-60073000	Enhancers	GM12878-XiMat	blood
15	chr3:60072200-60073000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
16	chr3:60072200-60073000	ZNF genes & repeats	Fetal Thymus	thymus
17	chr3:60072200-60074200	Enhancers	Dnd41	blood
18	chr3:60072400-60072800	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr3:60072400-60072800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
20	chr3:60072400-60073000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr3:60072400-60073000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr3:60072400-60073000	Enhancers	Primary T cells fromperipheralblood	blood
23	chr3:60072400-60073000	Enhancers	Primary hematopoietic stem cells short term culture	blood
24	chr3:60072400-60073000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
25	chr3:60072400-60073000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr3:60072400-60073000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr3:60072400-60073000	Enhancers	Esophagus	oesophagus
28	chr3:60072400-60073000	Enhancers	Placenta Amnion	Placenta Amnion
29	chr3:60072400-60073000	Enhancers	NH-A	brain
30	chr3:60072400-60073000	Enhancers	NHEK	skin
31	chr3:60072400-60073200	Enhancers	K562	blood
32	chr3:60072600-60072800	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr3:60072600-60072800	Enhancers	Thymus	Thymus
34	chr3:60072800-60073000	ZNF genes & repeats	Primary B cells from cord blood	blood
35	chr3:60072800-60073000	Enhancers	Psoas Muscle	Psoas
36	chr3:60072800-60073000	Enhancers	Stomach Mucosa	stomach
37	chr3:60072800-60073200	ZNF genes & repeats	Primary T cells from cord blood	blood
38	chr3:60072800-60073200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
39	chr3:60072800-60073200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
40	chr3:60072800-60073400	Enhancers	Primary T helper cells fromperipheralblood	blood
41	chr3:60072800-60075800	Weak transcription	Thymus	Thymus
42	chr3:60072800-60076000	Weak transcription	Primary T helper cells PMA-I stimulated	--
43	chr3:60073000-60073200	Weak transcription	Fetal Thymus	thymus
44	chr3:60073000-60080400	Weak transcription	Primary B cells from cord blood	blood
45	chr3:60073200-60074000	Enhancers	Primary T helper naive cells from peripheral blood	blood
46	chr3:60073200-60074000	Enhancers	Fetal Thymus	thymus
47	chr3:60073200-60075800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
48	chr3:60073400-60074000	Weak transcription	Primary T helper cells fromperipheralblood	blood
49	chr3:60074000-60074200	Enhancers	Primary T helper cells fromperipheralblood	blood
50	chr3:60074000-60075800	Weak transcription	Fetal Thymus	thymus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links