Variant report

Variant	nsv1008743
Chromosome Location	chr3:100340056-100419735
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:794)
CpG islands
(count:245)
Chromatin interactive
region (count:36)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:794 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:100369723-100370159	K562	blood:	n/a	n/a
2	ARID3A	chr3:100359648-100359874	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:100348388-100349223	K562	blood:	n/a	n/a
4	ARID3A	chr3:100381238-100381404	K562	blood:	n/a	n/a
5	ARID3A	chr3:100353731-100353930	K562	blood:	n/a	n/a
6	ARID3A	chr3:100400484-100400645	HepG2	liver:	n/a	n/a
7	ARID3A	chr3:100353734-100354533	HepG2	liver:	n/a	n/a
8	ATF1	chr3:100353718-100353993	K562	blood:	n/a	n/a
9	ATF1	chr3:100348373-100348950	K562	blood:	n/a	n/a
10	ATF2	chr3:100369506-100370238	GM12878	blood:	n/a	n/a
11	ATF2	chr3:100360476-100360923	GM12878	blood:	n/a	n/a
12	ATF3	chr3:100348592-100348961	K562	blood:	n/a	n/a
13	ATF3	chr3:100370050-100370425	K562	blood:	n/a	n/a
14	BACH1	chr3:100381410-100381594	K562	blood:	n/a	n/a
15	BACH1	chr3:100349457-100349877	H1-hESC	embryonic stem cell:	n/a	chr3:100349697-100349711
16	BATF	chr3:100369685-100370004	GM12878	blood:	n/a	n/a
17	BATF	chr3:100360240-100360471	GM12878	blood:	n/a	n/a
18	BATF	chr3:100360218-100360885	GM12878	blood:	n/a	chr3:100360555-100360566
19	BATF	chr3:100369687-100370030	GM12878	blood:	n/a	n/a
20	BCL11A	chr3:100360611-100360835	GM12878	blood:	n/a	n/a
21	BCL11A	chr3:100360195-100360894	GM12878	blood:	n/a	n/a
22	BCL11A	chr3:100360235-100360494	GM12878	blood:	n/a	n/a
23	BHLHE40	chr3:100353728-100354019	HepG2	liver:	n/a	n/a
24	BHLHE40	chr3:100353702-100354034	K562	blood:	n/a	n/a
25	BHLHE40	chr3:100369647-100370331	GM12878	blood:	n/a	n/a
26	BHLHE40	chr3:100360142-100360910	GM12878	blood:	n/a	n/a
27	BHLHE40	chr3:100353686-100354022	GM12878	blood:	n/a	n/a
28	CBX3	chr3:100415727-100416040	K562	blood:	n/a	n/a
29	CCNT2	chr3:100348632-100349219	K562	blood:	n/a	n/a
30	CEBPB	chr3:100385583-100385937	K562	blood:	n/a	chr3:100385738-100385749
31	CEBPB	chr3:100385561-100385931	A549	lung:	n/a	chr3:100385738-100385749
32	CEBPB	chr3:100416737-100417099	HepG2	liver:	n/a	chr3:100416923-100416934
33	CEBPB	chr3:100385548-100385946	K562	blood:	n/a	chr3:100385738-100385749
34	CEBPB	chr3:100416797-100417033	K562	blood:	n/a	chr3:100416923-100416934
35	CEBPB	chr3:100416869-100416985	H1-hESC	embryonic stem cell:	n/a	chr3:100416923-100416934
36	CEBPB	chr3:100350095-100350440	Hela-S3	cervix:	n/a	n/a
37	CEBPB	chr3:100370210-100370426	A549	lung:	n/a	chr3:100370349-100370362
38	CEBPB	chr3:100370030-100370435	HCT-116	colon:	n/a	chr3:100370349-100370362
39	CEBPB	chr3:100381321-100381668	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr3:100416771-100417076	A549	lung:	n/a	chr3:100416923-100416934
41	CEBPB	chr3:100348561-100348881	K562	blood:	n/a	n/a
42	CEBPB	chr3:100381066-100381689	K562	blood:	n/a	n/a
43	CEBPB	chr3:100373450-100373663	K562	blood:	n/a	chr3:100373575-100373586
44	CEBPB	chr3:100416846-100416982	HepG2	liver:	n/a	chr3:100416923-100416934
45	CEBPB	chr3:100385560-100385922	IMR90	lung:	n/a	chr3:100385738-100385749
46	CEBPB	chr3:100370096-100370525	Hela-S3	cervix:	n/a	chr3:100370349-100370362
47	CEBPB	chr3:100370097-100370487	IMR90	lung:	n/a	chr3:100370349-100370362
48	CEBPB	chr3:100373432-100373699	A549	lung:	n/a	chr3:100373575-100373586
49	CEBPB	chr3:100385583-100385925	H1-hESC	embryonic stem cell:	n/a	chr3:100385738-100385749
50	CEBPB	chr3:100399373-100399510	IMR90	lung:	n/a	chr3:100399445-100399456

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:100401284-100401334	HL-60	blood:	n/a
2	chr3:100401284-100401334	HL-60	blood:	n/a
3	chr3:100401200-100401250	RPTEC	kidney:	n/a
4	chr3:100401200-100401250	NHBE	bronchial:	n/a
5	chr3:100401284-100401334	HCPEpiC	choroid plexus:	n/a
6	chr3:100401200-100401250	HCT-116	colon:	n/a
7	chr3:100401284-100401334	PANC-1	pancreas:	n/a
8	chr3:100401200-100401250	AG10803	skin:	n/a
9	chr3:100401200-100401250	BE2_C	brain:	n/a
10	chr3:100349374-100349424	AG04450	lung:	fetal
11	chr3:100401270-100401320	HRCEpiC	kidney:	n/a
12	chr3:100401200-100401250	NHDF-neo	bronchial:	n/a
13	chr3:100349374-100349424	Hela-S3	cervix:	n/a
14	chr3:100401270-100401320	HIPEpiC	eye:	n/a
15	chr3:100401270-100401320	K562	blood:	n/a
16	chr3:100401200-100401250	NT2-D1	testis:	n/a
17	chr3:100401284-100401334	HPAEpiC	pulmonary alveolar:	n/a
18	chr3:100349374-100349424	GM06990	blood:	n/a
19	chr3:100349374-100349424	HIPEpiC	eye:	n/a
20	chr3:100401270-100401320	NH-A	brain:	n/a
21	chr3:100401200-100401250	PFSK-1	brain:	n/a
22	chr3:100401284-100401334	NHDF-neo	bronchial:	n/a
23	chr3:100401284-100401334	HNPCEpiC	eye:	n/a
24	chr3:100349374-100349424	GM12891	blood:	n/a
25	chr3:100401270-100401320	BJ	skin:	n/a
26	chr3:100401200-100401250	HRPEpiC	eye:	n/a
27	chr3:100401284-100401334	CMK	blood:	n/a
28	chr3:100349374-100349424	GM12892	blood:	n/a
29	chr3:100401270-100401320	BE2_C	brain:	n/a
30	chr3:100401284-100401334	SK-N-SH	brain:	n/a
31	chr3:100401270-100401320	NHDF-neo	bronchial:	n/a
32	chr3:100349374-100349424	HRE	kidney:	n/a
33	chr3:100401284-100401334	NT2-D1	testis:	n/a
34	chr3:100401284-100401334	SK-N-MC	brain:	n/a
35	chr3:100401270-100401320	HNPCEpiC	eye:	n/a
36	chr3:100401284-100401334	AG09319	gingival:	n/a
37	chr3:100401284-100401334	Hepatocyte	liver:	n/a
38	chr3:100401200-100401250	SK-N-SH	brain:	n/a
39	chr3:100401284-100401334	AG04450	lung:	fetal
40	chr3:100401284-100401334	GM19239	blood:	n/a
41	chr3:100349374-100349424	NHDF-neo	bronchial:	n/a
42	chr3:100349374-100349424	HCT-116	colon:	n/a
43	chr3:100349374-100349424	Hepatocyte	liver:	n/a
44	chr3:100401200-100401250	AG04450	lung:	fetal
45	chr3:100401270-100401320	RPTEC	kidney:	n/a
46	chr3:100401200-100401250	HUVEC	blood vessel:	n/a
47	chr3:100401270-100401320	NB4	blood:	n/a
48	chr3:100349374-100349424	T-47D	breast:	n/a
49	chr3:100401284-100401334	ovcar-3	ovarian:	n/a
50	chr3:100401270-100401320	T-47D	breast:	n/a

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:100414154..100421316-chr3:100422241..100429195,9	MCF-7	breast:
2	chr3:100340717..100343040-chr3:100348395..100351881,3	K562	blood:
3	chr3:100120411..100122999-chr3:100364924..100367578,2	K562	blood:
4	chr3:100419538..100421699-chr3:100430283..100434420,3	MCF-7	breast:
5	chr3:100412832..100415800-chr3:100417725..100420372,2	K562	blood:
6	chr3:100325407..100326196-chr3:100353394..100354270,2	MCF-7	breast:
7	chr3:100120818..100123698-chr3:100370041..100372201,2	K562	blood:
8	chr3:100369607..100371401-chr3:100374454..100376110,2	K562	blood:
9	chr3:100367436..100369530-chr3:100426605..100429472,2	MCF-7	breast:
10	chr3:100355413..100357441-chr3:100427541..100429664,2	K562	blood:
11	chr3:100348848..100350778-chr3:100351417..100355406,3	K562	blood:
12	chr3:100118924..100121912-chr3:100362623..100364573,2	K562	blood:
13	chr3:100374838..100376761-chr3:100378684..100380359,2	K562	blood:
14	chr3:100353552..100356244-chr3:100358458..100360777,2	K562	blood:
15	chr3:100348848..100350394-chr3:100351417..100354134,2	K562	blood:
16	chr3:100417750..100419779-chr3:100427601..100429655,2	K562	blood:
17	chr3:100374838..100376761-chr3:100378684..100380359,2	K562	blood:
18	chr3:100321003..100323549-chr3:100347554..100350487,3	MCF-7	breast:
19	chr3:100415596..100419109-chr3:100421112..100424187,4	K562	blood:
20	chr3:100369607..100371401-chr3:100374454..100376110,2	K562	blood:
21	chr3:100340717..100343040-chr3:100348395..100351881,3	K562	blood:
22	chr3:100412832..100415800-chr3:100417725..100420372,2	K562	blood:
23	chr3:100358087..100360713-chr3:100362813..100364716,2	K562	blood:
24	chr3:100181153..100182757-chr3:100352927..100354311,7	MCF-7	breast:
25	chr3:100322114..100322780-chr3:100353316..100353989,3	MCF-7	breast:
26	chr3:100410212..100413199-chr3:100413505..100415346,2	K562	blood:
27	chr3:100279818..100281392-chr3:100419411..100421780,2	K562	blood:
28	chr3:100325466..100327241-chr3:100349090..100350621,2	K562	blood:
29	chr3:100410212..100413199-chr3:100413505..100415346,2	K562	blood:
30	chr3:100358087..100360713-chr3:100362813..100364716,2	K562	blood:
31	chr3:100364940..100366707-chr3:100366782..100369483,3	K562	blood:
32	chr3:100348848..100350394-chr3:100351417..100354134,2	K562	blood:
33	chr3:100412000..100414603-chr3:100428096..100429901,2	K562	blood:
34	chr3:100372478..100376338-chr3:100378859..100382078,3	K562	blood:
35	chr3:100321992..100322818-chr3:100353419..100354308,2	MCF-7	breast:
36	chr3:100181696..100182432-chr3:100355242..100355805,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TMEM45A-1	chr3:100354384-100354670	NONHSAT090874
2	lnc-TMEM45A-1	chr3:100356146-100356419	NONHSAT090874
3	lnc-ABI3BP-1	chr3:100383894-100384320	NONHSAT090876

No data

Variant related genes	Relation type
GPR128	TF binding region
ENSG00000252989	TF binding region
GMFBP1	TF binding region
GPR128	CpG island
ENSG00000252989	CpG island
GMFBP1	CpG island
ENSG00000144820	chromatin interactions
ENSG00000114354	chromatin interactions
ENSG00000206535	chromatin interactions
ENSG00000252989	chromatin interactions
ENSG00000154174	chromatin interactions

Extended variants
information (count: 3200 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:3200 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs561162251	chr3:100340056-100340057	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs576441625	chr3:100340123-100340124	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs1680520	chr3:100340145-100340146	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs75385667	chr3:100340148-100340149	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs532324219	chr3:100340378-100340379	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs541069033	chr3:100340386-100340387	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs78732959	chr3:100340415-100340416	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs74706745	chr3:100340456-100340457	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs192423994	chr3:100340540-100340541	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs185710075	chr3:100340598-100340599	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs531034982	chr3:100340602-100340603	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs549857672	chr3:100340629-100340630	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs571377152	chr3:100340657-100340658	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs538626620	chr3:100340713-100340714	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs553846518	chr3:100340731-100340732	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs531529140	chr3:100340771-100340772	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs1620897	chr3:100340796-100340797	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs145973729	chr3:100340820-100340821	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs9821668	chr3:100340827-100340828	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs532460652	chr3:100340828-100340829	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs547146887	chr3:100340832-100340833	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs188637140	chr3:100340852-100340853	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs142075383	chr3:100340897-100340898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs576971936	chr3:100340922-100340923	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs568023239	chr3:100340941-100340942	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs559732959	chr3:100340957-100340958	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs536085382	chr3:100341021-100341022	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs74508526	chr3:100341064-100341065	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs140675087	chr3:100341109-100341110	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs397990633	chr3:100341123-100341124	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs61022302	chr3:100341129-100341130	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs114261972	chr3:100341135-100341136	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs192904533	chr3:100341154-100341155	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs151138622	chr3:100341197-100341198	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs114230351	chr3:100341199-100341200	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs571358919	chr3:100341226-100341227	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs532270708	chr3:100341246-100341247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs77604998	chr3:100341304-100341305	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs569765311	chr3:100341343-100341344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs659080	chr3:100341346-100341347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs536605355	chr3:100341419-100341420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs376791953	chr3:100341447-100341448	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs79696346	chr3:100341481-100341482	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs567222862	chr3:100341503-100341504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs554800000	chr3:100341513-100341514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs577416691	chr3:100341520-100341521	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs149850727	chr3:100341564-100341565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs536845688	chr3:100341565-100341566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs147944218	chr3:100341612-100341613	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs184717633	chr3:100341634-100341635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21785460	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:468 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100339400-100340400	Enhancers	Duodenum Mucosa	Duodenum
2	chr3:100339600-100340800	Enhancers	Small Intestine	intestine
3	chr3:100339800-100343000	Weak transcription	Fetal Intestine Large	intestine
4	chr3:100340000-100341800	Weak transcription	Fetal Intestine Small	intestine
5	chr3:100340800-100341000	Weak transcription	Small Intestine	intestine
6	chr3:100340800-100341200	Enhancers	K562	blood
7	chr3:100341800-100342000	ZNF genes & repeats	Fetal Intestine Small	intestine
8	chr3:100343800-100352000	Weak transcription	Fetal Intestine Large	intestine
9	chr3:100346200-100348000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:100346400-100348200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr3:100347400-100347600	Enhancers	Small Intestine	intestine
12	chr3:100347400-100348600	Enhancers	Primary hematopoietic stem cells	blood
13	chr3:100347600-100349200	Weak transcription	Small Intestine	intestine
14	chr3:100347600-100350000	Enhancers	HUVEC	blood vessel
15	chr3:100347600-100350400	Enhancers	K562	blood
16	chr3:100347800-100349800	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr3:100348000-100348800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr3:100348200-100348600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr3:100348200-100349800	Enhancers	NHEK	skin
20	chr3:100348200-100352200	Weak transcription	Primary neutrophils fromperipheralblood	blood
21	chr3:100348400-100349200	Enhancers	Duodenum Mucosa	Duodenum
22	chr3:100348400-100349400	Enhancers	Fetal Intestine Small	intestine
23	chr3:100348400-100350600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr3:100348400-100350600	Enhancers	HMEC	breast
25	chr3:100348600-100349800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr3:100348600-100350200	Enhancers	Hela-S3	cervix
27	chr3:100348600-100350400	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr3:100348600-100353400	Weak transcription	Primary hematopoietic stem cells	blood
29	chr3:100348600-100354200	Weak transcription	Sigmoid Colon	Sigmoid Colon
30	chr3:100348800-100349800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr3:100349000-100350400	Enhancers	iPS-15b Cell Line	embryonic stem cell
32	chr3:100349000-100350600	Enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr3:100349000-100350600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
34	chr3:100349200-100349400	Enhancers	Small Intestine	intestine
35	chr3:100349200-100350200	Enhancers	A549	lung
36	chr3:100349200-100350400	Enhancers	HUES6 Cell Line	embryonic stem cell
37	chr3:100349200-100350400	Enhancers	iPS-18 Cell Line	embryonic stem cell
38	chr3:100349200-100350600	Enhancers	iPS-20b Cell Line	embryonic stem cell
39	chr3:100349200-100352400	Weak transcription	Duodenum Mucosa	Duodenum
40	chr3:100349400-100352800	Weak transcription	Fetal Intestine Small	intestine
41	chr3:100349600-100349800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr3:100349600-100349800	Bivalent Enhancer	NHDF-Ad	bronchial
43	chr3:100349600-100350400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr3:100349600-100350400	Enhancers	H9 Cell Line	embryonic stem cell
45	chr3:100349800-100350000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr3:100349800-100352600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr3:100349800-100352800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
48	chr3:100349800-100352800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr3:100350400-100353600	Weak transcription	K562	blood
50	chr3:100350600-100353600	Weak transcription	HMEC	breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links